Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0205600-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:5345498:5348828:-1 gene:Os06g0205600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mechanosensitive ion channel domain-containing protein. (Os06t0205600-00)
Sequence	ATGGACCCGCCGAACCACGCCAAGCCGGCGGGCCCCGCCAATGTCGACCTCGTCCTCCTC ATCCCGCCCGACCATCCCCAGCCGCAGCTCCACCCCAACCACCACCAGCCGCAGCAGCCG CCGATGACGCCGACGACGCCGTTGCCGGAGGCCGCAAAACCTCCCCAAAACCCCGAGAAG ACGGCCGCCTCGAGCCCCCACGCGCCGTCCTCGCGCCCGCCGCTGCCTCCCGCCTCGGCC GCGCTCCTCCGCCGCCGCTCGTCGCTCACCAAGCCCAAGTCCCGCTTCGTCGAGCCCGCG GCCCCGCCCTCCTCCGCCGCCGCCGCCGCGGCCTCCTCCACTTCGTCGCACGCCTCCCCC GCGCACCCCGCCGCCGCCGCAGGGGGCGGCTCGGGGGCGGCTTCCACGCCGCACACCCCC GCGGAAGCCGACGACGAGGAGGAGGTGTTCCCCAAGGAGGTCCGGCGCAAGTCGTCGGCG CGCTGCCGCCGCAGGATGAAGCTGAGCGTGGAGCTCCTCGTGCTCGTCCTCTTCCTCGCG CTGCTCGTCGTCAGCCTCGTGGTGCGGCCGCTCAAGGGGGCTGGATTCTGGGGCCTGGAG ATCTGGAAGTGGTGCGTCATGGTCATCTGCGTCTTCTCCGGCCACCTCGTCAGCCATTGG GTCGTCACGCTCGTCGTCTTCCTCGTCGAGCGCAACTTCCTCCTCCGCAACAAGGTGCTC TACTTCGTCTTCGGCCTCAAGAAGAGCGTCCAGGTCTGCCTCTGGATCGGGCTCGTGCTC ATCGCCTGGTCGCAGCTCTTCGACCGCGACGTCGGGCGATCGGCCAAGACGGCCAGAATT CTCAATTATGTGTCCAGGTTTCTCGCCTCCGTGCTCATTGGATCAGTCATTTGGTTGGTC AAGACGTTCCTCATGAAGGTGGTGGCATCCACGTTCCACCGGAAGGCGTTCTTCGATCGG ATTCTGGAGAATGTGTTCGATCAGTACGTCCTGCAGACGTTGTCGGGGCCGCCCGTGATG GAGCTGGCAGAAAATGTGGGCCGGGAGGGTAGTGGTCTTGGGCGGGTGAGCTTCACCAAA CCGAAGGAGGAGAAAGGCTCGCCGGGTGTGATTGACGTGATGAAACTGAGGAAGATGAGC CAGGAGAAGGTGTCGGCGTGGACGATGAAAGGGTTGATGGCGGCAATCGGAAGCTCAAGG CTGTCAACGATATCTAATACGATCGAGAGCTTTGATGATGTTGATGGCATGGAGCAGAAG GATAAGGAGATAAATAATGAGTGGGAGGCAAAGGCAGCTGCATCTGCCATTTTCAAGAAC GTCGCAAGACCCGGCTATAAGCACATTGAGGAGGTGGATCTGCTAAGATTTTTCAACAAG GAGGAGGTGGATTTGGTGCTTCAAAGGTTTGAGGGAGCATTTGAGACCAGGAAGATAAAA AAGTCTGCACTGAAGAACTGGGTGGTAAAGGCATATCTTGACCGCAAATCACTGGCACAT TCTTTGAATGACACAAAAACAGCGGTTATGCAACTTCACAATCTGATCAGGGTTTTAGTG ATTATTATAATCATTATCATCACTTTGTTGTTGATGGGCATTGCGACAACAAAAATCCTC CTTGTCATCTCGTCCCAACTTTTAGTTGTGGTATTCATATTTGGAAATGCCTGCAAGACT GTATTTGAGGCTCTTATATTTGTATTCATCATGCATCCATTTGATGTTGGCGACCGCTGT GTCATCGATGGAATACAGATGGTTGTCGAAGAAATGAATATATTAACCACTATTTTCTTG AAAAATGACAATGAGAAAGTATATTACCCGAACTCTGTATTATCAACAAAGGCAATCAGC AACTTTTATCGAAGTCCCAATATGTATGACACCATTAATTTTACGATTGATGTTTCAACT TCAATTGAGAGAATTGGAGCTTTGAAGTCCAGAATCAAGGGGTACATAGACAGCAAACCG ACGCACTGGTGCCCTATTCACACCGTAAACTTAAAGGACATCTTGGACGTGAACAAGATC AACATGTCGCTGTGTGTCCAGCATACGATGAACTTCCAGAATATCCGAGAGAGGAACCTC AGGAGATCTGAGCTCGTCATGGAACTAAAGAAACTGTTTGAGGAGATGTCCATCACCTAC CACCTTTTGCCCCAAAAGGTTGAGCTTAGCTTTGTCGGCCCAAATCCAATACCCATTGCT CTTCCACAAAGCAGATAA

Peptide Sequence

PEP ID	Os06t0205600-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:5345498:5348828:-1 gene:Os06g0205600 transcript:Os06t0205600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mechanosensitive ion channel domain-containing protein. (Os06t0205600-00)
Sequence	MDPPNHAKPAGPANVDLVLLIPPDHPQPQLHPNHHQPQQPPMTPTTPLPEAAKPPQNPEK TAASSPHAPSSRPPLPPASAALLRRRSSLTKPKSRFVEPAAPPSSAAAAAASSTSSHASP AHPAAAAGGGSGAASTPHTPAEADDEEEVFPKEVRRKSSARCRRRMKLSVELLVLVLFLA LLVVSLVVRPLKGAGFWGLEIWKWCVMVICVFSGHLVSHWVVTLVVFLVERNFLLRNKVL YFVFGLKKSVQVCLWIGLVLIAWSQLFDRDVGRSAKTARILNYVSRFLASVLIGSVIWLV KTFLMKVVASTFHRKAFFDRILENVFDQYVLQTLSGPPVMELAENVGREGSGLGRVSFTK PKEEKGSPGVIDVMKLRKMSQEKVSAWTMKGLMAAIGSSRLSTISNTIESFDDVDGMEQK DKEINNEWEAKAAASAIFKNVARPGYKHIEEVDLLRFFNKEEVDLVLQRFEGAFETRKIK KSALKNWVVKAYLDRKSLAHSLNDTKTAVMQLHNLIRVLVIIIIIIITLLLMGIATTKIL LVISSQLLVVVFIFGNACKTVFEALIFVFIMHPFDVGDRCVIDGIQMVVEEMNILTTIFL KNDNEKVYYPNSVLSTKAISNFYRSPNMYDTINFTIDVSTSIERIGALKSRIKGYIDSKP THWCPIHTVNLKDILDVNKINMSLCVQHTMNFQNIRERNLRRSELVMELKKLFEEMSITY HLLPQKVELSFVGPNPIPIALPQSR

Transcript Sequence

Transcript ID	Os06t0205600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:5345498:5348828:-1 gene:Os06g0205600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mechanosensitive ion channel domain-containing protein. (Os06t0205600-00)
Sequence	ACGGCCACGGCCACCGTCCCGTTCCCCCCCTCCTCACGCCTCGCCACCCCACGCCCATCA CTCCCCCTCCGCCGCTGGCCGCCGCCGCCGCCGCCGCCTCCTCCACCCCACTCCCTGCAG CCTCACTCGCGTACGTGTTCGCCGCCCCCATGGACCCGCCGAACCACGCCAAGCCGGCGG GCCCCGCCAATGTCGACCTCGTCCTCCTCATCCCGCCCGACCATCCCCAGCCGCAGCTCC ACCCCAACCACCACCAGCCGCAGCAGCCGCCGATGACGCCGACGACGCCGTTGCCGGAGG CCGCAAAACCTCCCCAAAACCCCGAGAAGACGGCCGCCTCGAGCCCCCACGCGCCGTCCT CGCGCCCGCCGCTGCCTCCCGCCTCGGCCGCGCTCCTCCGCCGCCGCTCGTCGCTCACCA AGCCCAAGTCCCGCTTCGTCGAGCCCGCGGCCCCGCCCTCCTCCGCCGCCGCCGCCGCGG CCTCCTCCACTTCGTCGCACGCCTCCCCCGCGCACCCCGCCGCCGCCGCAGGGGGCGGCT CGGGGGCGGCTTCCACGCCGCACACCCCCGCGGAAGCCGACGACGAGGAGGAGGTGTTCC CCAAGGAGGTCCGGCGCAAGTCGTCGGCGCGCTGCCGCCGCAGGATGAAGCTGAGCGTGG AGCTCCTCGTGCTCGTCCTCTTCCTCGCGCTGCTCGTCGTCAGCCTCGTGGTGCGGCCGC TCAAGGGGGCTGGATTCTGGGGCCTGGAGATCTGGAAGTGGTGCGTCATGGTCATCTGCG TCTTCTCCGGCCACCTCGTCAGCCATTGGGTCGTCACGCTCGTCGTCTTCCTCGTCGAGC GCAACTTCCTCCTCCGCAACAAGGTGCTCTACTTCGTCTTCGGCCTCAAGAAGAGCGTCC AGGTCTGCCTCTGGATCGGGCTCGTGCTCATCGCCTGGTCGCAGCTCTTCGACCGCGACG TCGGGCGATCGGCCAAGACGGCCAGAATTCTCAATTATGTGTCCAGGTTTCTCGCCTCCG TGCTCATTGGATCAGTCATTTGGTTGGTCAAGACGTTCCTCATGAAGGTGGTGGCATCCA CGTTCCACCGGAAGGCGTTCTTCGATCGGATTCTGGAGAATGTGTTCGATCAGTACGTCC TGCAGACGTTGTCGGGGCCGCCCGTGATGGAGCTGGCAGAAAATGTGGGCCGGGAGGGTA GTGGTCTTGGGCGGGTGAGCTTCACCAAACCGAAGGAGGAGAAAGGCTCGCCGGGTGTGA TTGACGTGATGAAACTGAGGAAGATGAGCCAGGAGAAGGTGTCGGCGTGGACGATGAAAG GGTTGATGGCGGCAATCGGAAGCTCAAGGCTGTCAACGATATCTAATACGATCGAGAGCT TTGATGATGTTGATGGCATGGAGCAGAAGGATAAGGAGATAAATAATGAGTGGGAGGCAA AGGCAGCTGCATCTGCCATTTTCAAGAACGTCGCAAGACCCGGCTATAAGCACATTGAGG AGGTGGATCTGCTAAGATTTTTCAACAAGGAGGAGGTGGATTTGGTGCTTCAAAGGTTTG AGGGAGCATTTGAGACCAGGAAGATAAAAAAGTCTGCACTGAAGAACTGGGTGGTAAAGG CATATCTTGACCGCAAATCACTGGCACATTCTTTGAATGACACAAAAACAGCGGTTATGC AACTTCACAATCTGATCAGGGTTTTAGTGATTATTATAATCATTATCATCACTTTGTTGT TGATGGGCATTGCGACAACAAAAATCCTCCTTGTCATCTCGTCCCAACTTTTAGTTGTGG TATTCATATTTGGAAATGCCTGCAAGACTGTATTTGAGGCTCTTATATTTGTATTCATCA TGCATCCATTTGATGTTGGCGACCGCTGTGTCATCGATGGAATACAGATGGTTGTCGAAG AAATGAATATATTAACCACTATTTTCTTGAAAAATGACAATGAGAAAGTATATTACCCGA ACTCTGTATTATCAACAAAGGCAATCAGCAACTTTTATCGAAGTCCCAATATGTATGACA CCATTAATTTTACGATTGATGTTTCAACTTCAATTGAGAGAATTGGAGCTTTGAAGTCCA GAATCAAGGGGTACATAGACAGCAAACCGACGCACTGGTGCCCTATTCACACCGTAAACT TAAAGGACATCTTGGACGTGAACAAGATCAACATGTCGCTGTGTGTCCAGCATACGATGA ACTTCCAGAATATCCGAGAGAGGAACCTCAGGAGATCTGAGCTCGTCATGGAACTAAAGA AACTGTTTGAGGAGATGTCCATCACCTACCACCTTTTGCCCCAAAAGGTTGAGCTTAGCT TTGTCGGCCCAAATCCAATACCCATTGCTCTTCCACAAAGCAGATAAACAATGGGAAAGC TAACAACTGATGACCGTACCATGGTGGTCAAGGAGGCTGACAGCTAATGACTTTACAGTT TGTACTGATGTT