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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0205100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:5315163:5316640:1 gene:Os06g0205100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHROMOGEN FOR ANTHOCYANIN description:Similar to Transcriptional activator. (Os06t0205100-01)
Sequence

TGCGCACCAGATCGCTCAGTCTCACACCGCACAGAGACAGAGAAGAGCTCCGTCGTGCCG
CCGGGCCAGCAGCAGCAGCCAGCCTCCCGCGCCGACACCGACACAGCAACGGCAGCGGCG
GCGGCGGCGGCGACGACGACCACCGTGTGGGCGCCCAAGGCCGTGCGGTGCACGCGCGGG
TTCTTCTTCCACGACCGTGAAACGGCGCCGCTCGCCGCGGCGGCGCCGGCGCCGGCAGGG
GAATTAGGAGACGGCGATGACGTCGACTGCGACTACTACTGCAGCGGCAGCAGCTCGGCG
GCGACGACGACGTCGTCGAGCTCATTACCGGCGGTCGTCGAGCCGTGCTTCTCCGCCGGC
GACGACTGGATGGACGACGTGAGAGCCTTGGCGTCGTTTCTTGACACCGACGACGCCTGG
AACTTGTGTGCGTGA

Peptide Sequence

PEP ID

Os06t0205100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:5315163:5316640:1 gene:Os06g0205100 transcript:Os06t0205100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHROMOGEN FOR ANTHOCYANIN description:Similar to Transcriptional activator. (Os06t0205100-01)
Sequence

CAPDRSVSHRTETEKSSVVPPGQQQQPASRADTDTATAAAAAAATTTTVWAPKAVRCTRG
FFFHDRETAPLAAAAPAPAGELGDGDDVDCDYYCSGSSSAATTTSSSSLPAVVEPCFSAG
DDWMDDVRALASFLDTDDAWNLCA

Transcript Sequence

Transcript ID

Os06t0205100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:5315163:5316640:1 gene:Os06g0205100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHROMOGEN FOR ANTHOCYANIN description:Similar to Transcriptional activator. (Os06t0205100-01)
Sequence

AGGCTCTGATGCGCACCAGATCGCTCAGTCTCACACCGCACAGAGACAGAGAAGAGCTCC
GTCGTGCCGCCGGGCCAGCAGCAGCAGCCAGCCTCCCGCGCCGACACCGACACAGCAACG
GCAGCGGCGGCGGCGGCGGCGACGACGACCACCGTGTGGGCGCCCAAGGCCGTGCGGTGC
ACGCGCGGGTTCTTCTTCCACGACCGTGAAACGGCGCCGCTCGCCGCGGCGGCGCCGGCG
CCGGCAGGGGAATTAGGAGACGGCGATGACGTCGACTGCGACTACTACTGCAGCGGCAGC
AGCTCGGCGGCGACGACGACGTCGTCGAGCTCATTACCGGCGGTCGTCGAGCCGTGCTTC
TCCGCCGGCGACGACTGGATGGACGACGTGAGAGCCTTGGCGTCGTTTCTTGACACCGAC
GACGCCTGGAACTTGTGTGCGTGACATTAGTTCGTCGTCCGTACGTACCTACGTATATGC
ATGTGTGCGTCTCATAGAATGAATATAAAATAATATTTTCTCCATC