Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0199200-05
CDS Infomation	cds chromosome:IRGSP-1.0:6:5036133:5040677:-1 gene:Os06g0199200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Smr protein/MutS2 C-terminal domain containing protein. (Os06t0199200-01);Similar to smr domain containing protein. (Os06t0199200-03);Smr protein/MutS2 C-terminal domain containing protein. (Os06t0199200-04);Smr protein/MutS2 C-terminal domain containing protein. (Os06t0199200-05);Similar to smr domain containing protein. (Os06t0199200-06)
Sequence	ATGACTTCACTCAATAAAGTTGTTTCCAATGGAGATACAAGGTCAATGTTGCCAAATAAA GTCACAGCATTGAATCCCAACGCAGCAGAATTTGTACCTTCATGTATTAGACCATCTTTT GAGAGTAGCGCTGTCTCAGATGTAAGTAAGGCAGATCTTAGGGCTTCTGGGAAAACTATC CTAGATAGGTCCGAGTCATCAAAGTCAAATAACTCGGATGATGAGGCACACCAGTTTTGG CGTAAGCAGCTTCCTGATGACATTATTCCAGACTTCAGTTTTGAGAAAATTGAACAAGAA CCTGAAGAATTGTCTCTTGCTGGATTATCCTTGAATGCACCCCCTTTCTATGGAACAACA GCTAGCCGCTTTTCAAGAGAGCATGATTTATCTTCTCAAGCTAACAAGAGCCTGGAACTG GGGCTTACCAGTTTACTTTATGAAGATAATTCACAAGCATCGTTTCCAACTATGGGTTCA AGCAATTGGGAGCAAAATTTTGTAGGGGATCTCCATTTTACGAATGGAAATCAGGGCCTT CATTATGATTCTGAAAGTGCTGCAGGCTTTTCTGACAGTTTTGCTAGCGATTATGCTGCA GCAACAGACGATGTTCTTGACCCCCTAGCGTATTTAGCTTCACAGTTTCCTGATTTTTCA TCAGAGAGCCTTGCAGAGCTGTACTATGCTAATGGATGTGACTTCAACCATACTATTGAA ATCCTCACCCAGCTAGAGATGCAAGTTGATGCTACCTCCAATCCAACTCTGACCCCCAGG ACACCAAACTTTAGCACAGGGGACTTCCCCGCACTGCCAACAGTTGAAGACCAAAATGGT TTTTCCAAAGGCAATGCAGATATTCTAAGCATCTTCAATGGACGCAGCTCACCCTCTGTA TCTACTGGTACTGGTGATTTTGTTTCAGCTGTTCGCAAACTTGCATCGCAAAATTCTGGC CATTGGAAGTATAAGAAAGGTCCTGAATACGGTAATGGTGTTTCAACTGTTTCTGTACCC AAGCAGTACAGTTCTACGACCAAAACATCTTCTGGAAACAAGTTTCAAAGTGTTAGCAGT GCAAGAGCTGCTCCATGGCTCGAAACTGGAGATGCAGTAGCAAACATGTACTCAGAATCA AGGGGAGAAGCCCGTGATTTTGCCCGCATCCGAAATGCATGTTTTGAGCAGGCTAGACAG GCTTACCTGATTGGCAACAAAGCTCTAGCCAAGGAATTGAGTATGAAGGGACAGACATAT AACACACAAATGAAAGCATCTCATGAGAAAGCAAGAGAAGCTATTTATCGACAGAGGAAC CCATCTTCGCAACGAGGGAGCGACCGTCTGATCGATCTACATGGTCTCCATGTGAACGAA GCAATCCATATACTTAAGGTCGAGCTCGGTACTCTTAAGAGCACCGCGAGGGCTACAGGT GAGAGGATGCAAGTCATGATATGTGTCGGGACAGGTCATCACACCAAGGGTTCTCGCACC GCCAGGCTGCCCATCGCCGTCGAGCAGTTTCTTCTGGAGGAAGGCCTCCACTACACGCAG GCACAACCTGGTTTGCTCCGTGTTGTGGTGTTCTAA

Peptide Sequence

PEP ID	Os06t0199200-05
PEP Infomation	pep chromosome:IRGSP-1.0:6:5036133:5040677:-1 gene:Os06g0199200 transcript:Os06t0199200-05 gene_biotype:protein_coding transcript_biotype:protein_coding description:Smr protein/MutS2 C-terminal domain containing protein. (Os06t0199200-01);Similar to smr domain containing protein. (Os06t0199200-03);Smr protein/MutS2 C-terminal domain containing protein. (Os06t0199200-04);Smr protein/MutS2 C-terminal domain containing protein. (Os06t0199200-05);Similar to smr domain containing protein. (Os06t0199200-06)
Sequence	MTSLNKVVSNGDTRSMLPNKVTALNPNAAEFVPSCIRPSFESSAVSDVSKADLRASGKTI LDRSESSKSNNSDDEAHQFWRKQLPDDIIPDFSFEKIEQEPEELSLAGLSLNAPPFYGTT ASRFSREHDLSSQANKSLELGLTSLLYEDNSQASFPTMGSSNWEQNFVGDLHFTNGNQGL HYDSESAAGFSDSFASDYAAATDDVLDPLAYLASQFPDFSSESLAELYYANGCDFNHTIE ILTQLEMQVDATSNPTLTPRTPNFSTGDFPALPTVEDQNGFSKGNADILSIFNGRSSPSV STGTGDFVSAVRKLASQNSGHWKYKKGPEYGNGVSTVSVPKQYSSTTKTSSGNKFQSVSS ARAAPWLETGDAVANMYSESRGEARDFARIRNACFEQARQAYLIGNKALAKELSMKGQTY NTQMKASHEKAREAIYRQRNPSSQRGSDRLIDLHGLHVNEAIHILKVELGTLKSTARATG ERMQVMICVGTGHHTKGSRTARLPIAVEQFLLEEGLHYTQAQPGLLRVVVF

Transcript Sequence

Transcript ID	Os06t0199200-05
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:5036133:5040677:-1 gene:Os06g0199200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Smr protein/MutS2 C-terminal domain containing protein. (Os06t0199200-01);Similar to smr domain containing protein. (Os06t0199200-03);Smr protein/MutS2 C-terminal domain containing protein. (Os06t0199200-04);Smr protein/MutS2 C-terminal domain containing protein. (Os06t0199200-05);Similar to smr domain containing protein. (Os06t0199200-06)
Sequence	AGATCTGGCGCTGGCTCCCCCCGGGTTCCGGGTAGATCTGGGGGTGTAGATCTCGCCCGG CGTTAGGATTTTTTTTTTTGTTCCGTTGATTGTCCGGGTTAGGGAAAACCCGGAAAAGGC GTGATTTTTTTTTGATTGAGGCATCTCGCCACCGGCCGGGGAGACGGGGAGGAGGGCGTG GGGTGTTTAGCGTGCGTGTGCTGGACGGAGAGGAAAAGCAAGGGGGTACTGTTTGCTCGT CTTTCCGTTGCTCTTTTGCCTCTTTTGATTGTACAATCTTCCCTTTTCTGTGTTAGAGAT GGAGTTGCGTGGACTTTTGAGGATATCTTCTCTTTCCTTTCCAAAAAAACAGCAATAAGC TTCTGTTTCTTTTGTTATGGTTCCTTTCTTACTGATTTGATGGTTTCTATATACGTTTGG GTGAGAGAACAGCGTGTCGGTATGTGAGAACGAAGGACGGAAGGAGGAGATATTGAGCCT ATTTAATTGATGAATTTATGGAGGAGATATTGAGATAATGTGTCAGAAAACTTGCTTCTT TTGCGACGGCAGCTATATGAGTTACTAAGAAGAGTCGCGCCAATTTTGTGGAAACTGGGA GCAAATCATTAGAAGTTCTCTTCTTTTTTTGGTTGACAGAGCTACTGATTTTGGGTCTTC TGTGAATGTGGAAATTTCTATTATCAGTATCAGTCGCATTGATTGTGGTATTTCTCCCTG GCAGTGAAAACAAACAAACAAAATATTTTATGAATCCTAACGGAAAGTAAACGGCTTGTA GATTTTTACTTTTTAAGAACTTGTATAACTGAATCCTTGTCCATTTGTCCAGCCTTATAT ATCCTATTGTGTTATCTTCAATCTTTGTATGATGCAGCGGCTTGCTGGCTTTAATTTATG GACATACTATGAAGTAATTAAATTGTTTTGTTCTAAATATTTATTGCCCTAATAGCAAGA ACTAGCTGTTGTTCTTGTAGTTGGTTTATTTGTTTTTGGTATTTTATAATAGGGTTGAAA TGAAATTTCCCACAACACTATCAATTTTATTGAGTCTGACAAAGATTACTAGCTCTAGTG AGCCTTACCTGTAGGTTAGCATATTGTCTTGCTTATTAACAAAAATACTAGTTTCTTTTT TTGAGTTGACAAATACTAGTTTATTAATATTATGGAAGTTATATTTTCTGTTAAATTACA CCTATTTGTTCATATATAATCTTTTGGTAAAGGTTGACGTGATTGTGGTACATCAAGTGC TCAGCCATGTTCATGCTAATCCTTGTTGATATCTTTGCAGGGCTTGGATAAAATCTTATT GCAAATTTCCCCTTGTACATGTAACATCACATGTAATTTCTATTAAAAATGACTTCACTC AATAAAGTTGTTTCCAATGGAGATACAAGGTCAATGTTGCCAAATAAAGTCACAGCATTG AATCCCAACGCAGCAGAATTTGTACCTTCATGTATTAGACCATCTTTTGAGAGTAGCGCT GTCTCAGATGTAAGTAAGGCAGATCTTAGGGCTTCTGGGAAAACTATCCTAGATAGGTCC GAGTCATCAAAGTCAAATAACTCGGATGATGAGGCACACCAGTTTTGGCGTAAGCAGCTT CCTGATGACATTATTCCAGACTTCAGTTTTGAGAAAATTGAACAAGAACCTGAAGAATTG TCTCTTGCTGGATTATCCTTGAATGCACCCCCTTTCTATGGAACAACAGCTAGCCGCTTT TCAAGAGAGCATGATTTATCTTCTCAAGCTAACAAGAGCCTGGAACTGGGGCTTACCAGT TTACTTTATGAAGATAATTCACAAGCATCGTTTCCAACTATGGGTTCAAGCAATTGGGAG CAAAATTTTGTAGGGGATCTCCATTTTACGAATGGAAATCAGGGCCTTCATTATGATTCT GAAAGTGCTGCAGGCTTTTCTGACAGTTTTGCTAGCGATTATGCTGCAGCAACAGACGAT GTTCTTGACCCCCTAGCGTATTTAGCTTCACAGTTTCCTGATTTTTCATCAGAGAGCCTT GCAGAGCTGTACTATGCTAATGGATGTGACTTCAACCATACTATTGAAATCCTCACCCAG CTAGAGATGCAAGTTGATGCTACCTCCAATCCAACTCTGACCCCCAGGACACCAAACTTT AGCACAGGGGACTTCCCCGCACTGCCAACAGTTGAAGACCAAAATGGTTTTTCCAAAGGC AATGCAGATATTCTAAGCATCTTCAATGGACGCAGCTCACCCTCTGTATCTACTGGTACT GGTGATTTTGTTTCAGCTGTTCGCAAACTTGCATCGCAAAATTCTGGCCATTGGAAGTAT AAGAAAGGTCCTGAATACGGTAATGGTGTTTCAACTGTTTCTGTACCCAAGCAGTACAGT TCTACGACCAAAACATCTTCTGGAAACAAGTTTCAAAGTGTTAGCAGTGCAAGAGCTGCT CCATGGCTCGAAACTGGAGATGCAGTAGCAAACATGTACTCAGAATCAAGGGGAGAAGCC CGTGATTTTGCCCGCATCCGAAATGCATGTTTTGAGCAGGCTAGACAGGCTTACCTGATT GGCAACAAAGCTCTAGCCAAGGAATTGAGTATGAAGGGACAGACATATAACACACAAATG AAAGCATCTCATGAGAAAGCAAGAGAAGCTATTTATCGACAGAGGAACCCATCTTCGCAA CGAGGGAGCGACCGTCTGATCGATCTACATGGTCTCCATGTGAACGAAGCAATCCATATA CTTAAGGTCGAGCTCGGTACTCTTAAGAGCACCGCGAGGGCTACAGGTGAGAGGATGCAA GTCATGATATGTGTCGGGACAGGTCATCACACCAAGGGTTCTCGCACCGCCAGGCTGCCC ATCGCCGTCGAGCAGTTTCTTCTGGAGGAAGGCCTCCACTACACGCAGGCACAACCTGGT TTGCTCCGTGTTGTGGTGTTCTAACATCTCTTAGGTCAGCAGCACGAAGAAAAAAGAAGC AAAACAAAAAAAGGAGAAAGAGATGTAGGGAAAAGAAAAACCTAAAAAAAATGGCCGCTG TTGCAGCACTGTAATTTTCTTGTAGTTGTATATTAAAAGAGGCAGCAGGAGAATAGCCTG ACAACAGAATACAGTGTAAAATTATACATAGCTTCATTCAATTCACATTCCATTCC