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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0198500-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:5002456:5004747:-1 gene:Os06g0198500 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os06t0198500-00)
Sequence

ATGGCGCTCACGAGCGTGGAGAAGAAGACGGCGGCGGAGATCGTCGCCATGCTGGATCTG
CAGCGCCACCCCGACGGCGGCTTCTACCTGGAGACCTTCCGCGACCCCTCCATCTCCCTC
CCCAAGTCCGCGCTCCCTCCACGCTATAAGGTAGACCGTTCTGGGAGCAGTGCCATCTAT
TTCCTGCTGCCTGCTGGAGAGATTGCTAAGTTGCACCGCATCCCTTGTGCTGAGACCTGG
CACTACTACATGGGGGAACCTCTCACGGTATTTGAGGTCCATGACGATGGACAGATCAAG
ATGACAGTCGTTGGACCTGATCTACGGCATGGCCAAAGGCCACAATACACAGTCCCTCCA
AATGTTTGGTTTGGCGCCTTCTTGACCTGCGACATTGAGTCCTTCACCGAAGATGGAAGT
GTATTTGTCAAAACGCCAGGAAGAGACCCTGAACTTCACTACTCTTTCGTCGGTGTAACC
TGTGCTCCAGCATTCCAGTTTGAGGACAACGAAATGGCAACACGGGAGACCATGAAGACA
CTTGCTCCTAAAGCCGAAGCTTTCATCAACTACCTTGTTCCTTCAGACTGA

Peptide Sequence

PEP ID

Os06t0198500-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:5002456:5004747:-1 gene:Os06g0198500 transcript:Os06t0198500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os06t0198500-00)
Sequence

MALTSVEKKTAAEIVAMLDLQRHPDGGFYLETFRDPSISLPKSALPPRYKVDRSGSSAIY
FLLPAGEIAKLHRIPCAETWHYYMGEPLTVFEVHDDGQIKMTVVGPDLRHGQRPQYTVPP
NVWFGAFLTCDIESFTEDGSVFVKTPGRDPELHYSFVGVTCAPAFQFEDNEMATRETMKT
LAPKAEAFINYLVPSD

Transcript Sequence

Transcript ID

Os06t0198500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:5002456:5004747:-1 gene:Os06g0198500 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os06t0198500-00)
Sequence

ATGGCGCTCACGAGCGTGGAGAAGAAGACGGCGGCGGAGATCGTCGCCATGCTGGATCTG
CAGCGCCACCCCGACGGCGGCTTCTACCTGGAGACCTTCCGCGACCCCTCCATCTCCCTC
CCCAAGTCCGCGCTCCCTCCACGCTATAAGGTAGACCGTTCTGGGAGCAGTGCCATCTAT
TTCCTGCTGCCTGCTGGAGAGATTGCTAAGTTGCACCGCATCCCTTGTGCTGAGACCTGG
CACTACTACATGGGGGAACCTCTCACGGTATTTGAGGTCCATGACGATGGACAGATCAAG
ATGACAGTCGTTGGACCTGATCTACGGCATGGCCAAAGGCCACAATACACAGTCCCTCCA
AATGTTTGGTTTGGCGCCTTCTTGACCTGCGACATTGAGTCCTTCACCGAAGATGGAAGT
GTATTTGTCAAAACGCCAGGAAGAGACCCTGAACTTCACTACTCTTTCGTCGGTGTAACC
TGTGCTCCAGCATTCCAGTTTGAGGACAACGAAATGGCAACACGGGAGACCATGAAGACA
CTTGCTCCTAAAGCCGAAGCTTTCATCAACTACCTTGTTCCTTCAGACTGAGTCTGAAAC
CATCACTCCAAGTAGCTTGCTCTTCGTGATGAACTTTATGTACCAAGCTACTGATTCAGT
ACTGATGTTTACTGCTTGATCTGAGATCTGTTCAGGAC