Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0196900-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:4933950:4938469:1 gene:Os06g0196900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chaperonin. (Os06t0196900-01);Similar to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) (Chaperonin 20). (Os06t0196900-02);Similar to Chaperonin. (Os06t0196900-03)
Sequence	ATGTCGTCGGTGCAGCTCTCCGGTGCCGGAGTCGCCGCGGTGGCCTTCACCAAGAATGGC GCGTCTTCCTTCGACGGGCTCCGCCTCGCGCCGCCATCTGTGCGAGTCTGCTCCTCCAGG CGCCCGTCTCGTAGCCTCGTCGTCAAGGCCGCCACGGTCGTCACCCCAAAGTATACCTCG CTCAAGCCTCTGGGAGACAGAGTGCTTGTGAAGCTTGGTGCTGCAGAGGAGAAGACTGTT GGTGGGATTCTGCTTCCGTCAACCGCACAGTCTAAGCCTCAGGGAGGTGAGGTTGTTGCT GTTGGAGAGGGAAGAACTATTGGGGATAAGAAAGTTGAGGTCAGCTTGCAGATTGGGGCT GAAGTTGTATATTCAAAATATGCTGGGACTGAGGTGCAATTTAACGACACCAAACATCTT ATTCTAAAAGAGGATGATATCATTGGTGTTCTTGAGACTGATGATGTCAAAGATATGAAG CCCCTTAATGACCGGGTTCTCATCAAGGTTGCTGAGGCTGAAGACAAAACTGCTGGTGGC CTTATTCTCACTGAAACCACTAAGGAGAAGCCATCAATCGGAACAGTTGTAGCCGTTGGT CCAGGCCCTCTTGATGATGAAGGCAAGAGGCAGCCATTGTCAGTTTCAGCGGGCAGCACT CTGTGA

Peptide Sequence

PEP ID	Os06t0196900-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:4933950:4938469:1 gene:Os06g0196900 transcript:Os06t0196900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chaperonin. (Os06t0196900-01);Similar to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) (Chaperonin 20). (Os06t0196900-02);Similar to Chaperonin. (Os06t0196900-03)
Sequence	MSSVQLSGAGVAAVAFTKNGASSFDGLRLAPPSVRVCSSRRPSRSLVVKAATVVTPKYTS LKPLGDRVLVKLGAAEEKTVGGILLPSTAQSKPQGGEVVAVGEGRTIGDKKVEVSLQIGA EVVYSKYAGTEVQFNDTKHLILKEDDIIGVLETDDVKDMKPLNDRVLIKVAEAEDKTAGG LILTETTKEKPSIGTVVAVGPGPLDDEGKRQPLSVSAGSTL

Transcript Sequence

Transcript ID	Os06t0196900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4933950:4938469:1 gene:Os06g0196900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chaperonin. (Os06t0196900-01);Similar to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) (Chaperonin 20). (Os06t0196900-02);Similar to Chaperonin. (Os06t0196900-03)
Sequence	AGCTCCTCTTTCGCTTTAGCCGCAGCTGCTTCGCTCTGCTTTCTCCGTAGGGTTTATCCC TTTGCTTCTCCTCGTCTCCCTCCCCCTCGCACGCAAAGGCACAAAGCCCGGATTCCACCG CCGGAGCCGACCCGCTTCGAGGCGAATCGAGAGTTAGCTTTCCAGCCAGCAATCGAGGAT GTCGTCGGTGCAGCTCTCCGGTGCCGGAGTCGCCGCGGTGGCCTTCACCAAGAATGGCGC GTCTTCCTTCGACGGGCTCCGCCTCGCGCCGCCATCTGTGCGAGTCTGCTCCTCCAGGCG CCCGTCTCGTAGCCTCGTCGTCAAGGCCGCCACGGTCGTCACCCCAAAGTATACCTCGCT CAAGCCTCTGGGAGACAGAGTGCTTGTGAAGCTTGGTGCTGCAGAGGAGAAGACTGTTGG TGGGATTCTGCTTCCGTCAACCGCACAGTCTAAGCCTCAGGGAGGTGAGGTTGTTGCTGT TGGAGAGGGAAGAACTATTGGGGATAAGAAAGTTGAGGTCAGCTTGCAGATTGGGGCTGA AGTTGTATATTCAAAATATGCTGGGACTGAGGTGCAATTTAACGACACCAAACATCTTAT TCTAAAAGAGGATGATATCATTGGTGTTCTTGAGACTGATGATGTCAAAGATATGAAGCC CCTTAATGACCGGGTTCTCATCAAGGTTGCTGAGGCTGAAGACAAAACTGCTGGTGGCCT TATTCTCACTGAAACCACTAAGGAGAAGCCATCAATCGGAACAGTTGTAGCCGTTGGTCC AGGCCCTCTTGATGATGAAGGCAAGAGGCAGCCATTGTCAGTTTCAGCGGGCAGCACTCT GTGATTTGTTTCAATTTTGAGTTCAGAATAGACGGTAGCAGGTGGTAATGGTTGCCATGT GGTGATCTTCACTCTGCGGAGATGCTGTCTTTGATAATCCTAGAATTCGAACGCAACAAT TTGCAGATCTCCTACGGGATCAACATTCCACTGTGACTGATTTTTATTTATAAAAGTTTG TTTTGTTTC