Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0196700-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:4926019:4932612:1 gene:Os06g0196700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 16 description:Similar to Auxin response factor 1. (Os06t0196700-01);Auxin response factor, Transcription factor, Cytokinin-mediated inhibition of phosphate transport, Phosphate signaling, Auxin and phosphate starvation response (Os06t0196700-02)
Sequence	ATGAAGGATCAGGGATCATCCGGTGTGTCTCCCGCCCCAGGGGAAGGGGAGAAGAAAGCC ATCAATTCGGAGCTATGGCATGCTTGTGCCGGGCCTCTTGTGTCGCTGCCGCCGGTGGGC AGTCTCGTCGTGTACTTCCCTCAGGGTCATAGCGAGCAGGTTGCTGCTTCCATGCACAAG GAGCTGGACAACATCCCTGGTTATCCCTCTCTTCCGTCTAAGCTGATCTGCAAACTTCTG AGTCTCACCTTACATGCAGATTCTGAAACTGATGAAGTTTATGCTCAGATGACACTTCAA CCAGTCAATAAATATGATCGAGATGCAATGCTGGCATCTGAACTGGGCCTGAAGCAAAAC AAGCAACCAGCGGAGTTCTTTTGCAAAACGCTGACGGCGAGCGACACAAGTACCCATGGT GGATTTTCAGTGCCACGTCGTGCGGCGGAGAAGATATTTCCACCACTAGACTTTACCATG CAACCACCAGCACAAGAGCTCATCGCCAAGGATCTGCATGATATTTCATGGAAATTTCGA CACATTTACCGAGGTCAACCAAAGAGGCACCTTCTGACAACTGGTTGGAGCGTCTTTGTC AGCACAAAAAGGCTTCTAGCTGGTGATTCAGTTCTGTTTATAAGGGATGAGAAATCTCAG CTTCTATTAGGCATACGTCGTGCTACCAGACCCCAACCAGCTCTATCGTCATCAGTTCTA TCAAGTGATAGCATGCACATTGGGATTCTAGCTGCTGCAGCACATGCTGCTGCAAACAGT AGCCCATTTACTATTTTCTACAATCCAAGGGCAAGTCCATCAGAATTTGTCATTCCTTTA GCGAAATATAACAAGGCTTTGTATACACAAGTATCTCTTGGAATGCGGTTCAGAATGCTG TTTGAGACAGAGGATTCAGGGGTTCGAAGATATATGGGAACAATCACAGGTATTGGTGAC TTGGATCCAGTGCGCTGGAAGAACTCTCATTGGCGAAACCTTCAGGTTGGTTGGGATGAA TCAACAGCATCTGAGAGGCGCACTCGTGTTTCAATATGGGAGATTGAACCAGTCGCGACA CCTTTTTATATTTGTCCACCACCATTTTTCAGGCCAAAACTTCCTAAGCAGCCAGGAATG CCAGATGATGAAAATGAAGTTGAGAGTGCTTTCAAAAGAGCCATGCCATGGCTTGCTGAT GACTTTGCCCTGAAAGATGTGCAAAGTGCATTATTTCCAGGTCTGAGCCTAGTCCAATGG ATGGCTATGCAACAGAATCCTCAGATGCTAACAGCTGCGTCCCAAACAGTGCAATCACCG TACTTGAACTCCAATGCATTGGCTATGCAGGATGTGATGGGTAGTAGCAACGAGGACCCA ACAAAAAGATTGAACACACAGGCACAAAATATGGTTTTACCTAATTTACAGGTTGGCTCA AAAGTGGATCACCCTGTAATGTCTCAACATCAACAGCAGCCACACCAACTATCACAACAG CAGCAGGTCCAGCCATCGCAGCAAAGTTCTGTGGTTTTACAGCAACATCAAGCCCAGTTG CTGCAGCAGAACGCCATTCACTTGCAGCAGCAGCAAGAACATCTCCAGCGGCAGCAGTCA CAACCGGCACAGCAGTTGAAGGCTGCTTCAAGTCTGCATTCAGTGGAACAGCACAAGCTG AAAGAACAGACTTCAGGTGGGCAGGTTGCCTCACAAGCACAAATGTTAAACCAGATTTTC CCACCATCTTCATCGCAGCTACAACAGTTAGGTTTACCCAAGTCACCTACTCATCGCCAA GGGTTGACAGGATTACCAATTGCAGGTTCTTTGCAGCAGCCCACACTAACTCAGACATCT CAAGTCCAGCAAGCAGCCGAATATCAGCAGGCCCTCCTACAGAGTCAGCAACAGCAACAG CAACTGCAACTGCAACAACTATCACAACCAGAAGTACAGCTGCAGCTGCTTCAAAAGATT CAACAACAAAACATGCTATCTCAGCTGAACCCACAACATCAGTCCCAGTTGATTCAACAA TTGTCTCAGAAAAGCCAGGAAATTCTACAGCAACAAATTTTGCAACATCAATTTGGTGGG TCTGATTCTATTGGTCAACTCAAGCAATCACCATCGCAGCAAGCTCCTTTAAACCACATG ACAGGATCTTTGACGCCCCAGCAACTTGTCAGATCACATTCGGCACTTGCTGAGAGTGGG GATCCATCCAGTTCAACTGCTCCATCCACCAGCCGTATTTCTCCAATAAATTCGCTGAGT AGGGCAAACCAAGGAAGCAGAAATTTAACTGACATGGTGGCAACACCACAAATTGACAAC TTACTTCAGGAAATTCAAAGCAAGCCAGATAATCGAATTAAGAATGACATACAGAGCAAA GAAACAGTCCCTATACATAACCGACATCCAGTTTCTGATCAACTTGATGCATCATCTGCT ACCTCCTTTTGTTTAGACGAGAGCCCACGAGAAGGTTTTTCCTTCCCTCCAGTTTGTTTG GATAACAATGTTCAAGTTGATCCAAGAGATAACTTTCTTATTGCGGAAAATGTGGACGCA TTGATGCCAGATGCCCTGTTGTCAAGAGGTATGGCTTCAGGAAAGGGCATGTGCACTCTG ACTTCTGGACAAAGGGATCACAGGGATGTCGAGAATGAGCTATCATCTGCTGCATTCAGT TCCCAGTCATTTGGTGTGCCTGACATGTCCTTTAAGCCTGGATGTTCAAGTGACGTTGCT GTTACTGATGCCGGAATGCCAAGCCAAGGTTTGTGGAATAATCAAACACAACGGATGAGA ACTTTCACTAAGGTTCAAAAGCGTGGTTCTGTGGGGAGATCAATTGATATCACAAGATAT CGAGATTATGATGAACTTAGGCATGATCTTGCATGCATGTTTGGTATCCAAGGTCAACTT GAAGATCCATATAGGATGGATTGGAAGCTAGTCTATGTTGATCATGAGAATGATATCCTT CTTGTCGGCGACGACCCTTGGGAGGAATTTGTGGGCTGTGTGAAGAGCATCAAAATACTC TCAGCTGCTGAAGTACAACAGATGAGCTTGGATGGTGACCTTGGTGGCGTCCCTCCACAA ACACAGGCCTGTAGTGCCTCTGATGATGCAAATGCATGGAGAGGTTGA

Peptide Sequence

PEP ID	Os06t0196700-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:4926019:4932612:1 gene:Os06g0196700 transcript:Os06t0196700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 16 description:Similar to Auxin response factor 1. (Os06t0196700-01);Auxin response factor, Transcription factor, Cytokinin-mediated inhibition of phosphate transport, Phosphate signaling, Auxin and phosphate starvation response (Os06t0196700-02)
Sequence	MKDQGSSGVSPAPGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHK ELDNIPGYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQN KQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFR HIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVL SSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRML FETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT PFYICPPPFFRPKLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSALFPGLSLVQW MAMQQNPQMLTAASQTVQSPYLNSNALAMQDVMGSSNEDPTKRLNTQAQNMVLPNLQVGS KVDHPVMSQHQQQPHQLSQQQQVQPSQQSSVVLQQHQAQLLQQNAIHLQQQQEHLQRQQS QPAQQLKAASSLHSVEQHKLKEQTSGGQVASQAQMLNQIFPPSSSQLQQLGLPKSPTHRQ GLTGLPIAGSLQQPTLTQTSQVQQAAEYQQALLQSQQQQQQLQLQQLSQPEVQLQLLQKI QQQNMLSQLNPQHQSQLIQQLSQKSQEILQQQILQHQFGGSDSIGQLKQSPSQQAPLNHM TGSLTPQQLVRSHSALAESGDPSSSTAPSTSRISPINSLSRANQGSRNLTDMVATPQIDN LLQEIQSKPDNRIKNDIQSKETVPIHNRHPVSDQLDASSATSFCLDESPREGFSFPPVCL DNNVQVDPRDNFLIAENVDALMPDALLSRGMASGKGMCTLTSGQRDHRDVENELSSAAFS SQSFGVPDMSFKPGCSSDVAVTDAGMPSQGLWNNQTQRMRTFTKVQKRGSVGRSIDITRY RDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGDDPWEEFVGCVKSIKIL SAAEVQQMSLDGDLGGVPPQTQACSASDDANAWRG

Transcript Sequence

Transcript ID	Os06t0196700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4926019:4932612:1 gene:Os06g0196700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 16 description:Similar to Auxin response factor 1. (Os06t0196700-01);Auxin response factor, Transcription factor, Cytokinin-mediated inhibition of phosphate transport, Phosphate signaling, Auxin and phosphate starvation response (Os06t0196700-02)
Sequence	GGCTTCCTCCTCCACTTGCTTCGTCGTCGTCGTCCTCCTCCTCCTCTCTCTACTCTCTCT CTCCGAACCATCCTTCCCACCCGGCACGCCGCCGCGCGCTGTTCCCGACGGCGGCCGGTG GCCGGAGTGAGAGGCTGGGTGTACTGTCCGCTGATGCTCGTGGGAGGCGGCGGCGGCGGC GGCGGCGTGTGATGAGCGGAGGCCGCGTGGGCGAGAACCTGTCGCGTCGGCACGGCGGCG GCGGCGGTGGCGAGGGCTCGTCAGGCTTGGCCACGCTTTGCTCCCTTCGCAGTGGCGCTC CCCTGGTGCCGAATATTATACTCGCCGCCGCCTCGTGCCGCCTACTTTAGGCGGAAAGGG GGAGAGCTCTCCTATCCTAGCTGCTGCTGCTGCCACTGGCTAAGTTGGTAAAAGGTGGAG GAGGCGGATATTCGTGTATCCGGAGGAGAGATTTGGATCGGGATCTCGCCGGGATGAAGG ATCAGGGATCATCCGGTGTGTCTCCCGCCCCAGGGGAAGGGGAGAAGAAAGCCATCAATT CGGAGCTATGGCATGCTTGTGCCGGGCCTCTTGTGTCGCTGCCGCCGGTGGGCAGTCTCG TCGTGTACTTCCCTCAGGGTCATAGCGAGCAGGTTGCTGCTTCCATGCACAAGGAGCTGG ACAACATCCCTGGTTATCCCTCTCTTCCGTCTAAGCTGATCTGCAAACTTCTGAGTCTCA CCTTACATGCAGATTCTGAAACTGATGAAGTTTATGCTCAGATGACACTTCAACCAGTCA ATAAATATGATCGAGATGCAATGCTGGCATCTGAACTGGGCCTGAAGCAAAACAAGCAAC CAGCGGAGTTCTTTTGCAAAACGCTGACGGCGAGCGACACAAGTACCCATGGTGGATTTT CAGTGCCACGTCGTGCGGCGGAGAAGATATTTCCACCACTAGACTTTACCATGCAACCAC CAGCACAAGAGCTCATCGCCAAGGATCTGCATGATATTTCATGGAAATTTCGACACATTT ACCGAGGTCAACCAAAGAGGCACCTTCTGACAACTGGTTGGAGCGTCTTTGTCAGCACAA AAAGGCTTCTAGCTGGTGATTCAGTTCTGTTTATAAGGGATGAGAAATCTCAGCTTCTAT TAGGCATACGTCGTGCTACCAGACCCCAACCAGCTCTATCGTCATCAGTTCTATCAAGTG ATAGCATGCACATTGGGATTCTAGCTGCTGCAGCACATGCTGCTGCAAACAGTAGCCCAT TTACTATTTTCTACAATCCAAGGGCAAGTCCATCAGAATTTGTCATTCCTTTAGCGAAAT ATAACAAGGCTTTGTATACACAAGTATCTCTTGGAATGCGGTTCAGAATGCTGTTTGAGA CAGAGGATTCAGGGGTTCGAAGATATATGGGAACAATCACAGGTATTGGTGACTTGGATC CAGTGCGCTGGAAGAACTCTCATTGGCGAAACCTTCAGGTTGGTTGGGATGAATCAACAG CATCTGAGAGGCGCACTCGTGTTTCAATATGGGAGATTGAACCAGTCGCGACACCTTTTT ATATTTGTCCACCACCATTTTTCAGGCCAAAACTTCCTAAGCAGCCAGGAATGCCAGATG ATGAAAATGAAGTTGAGAGTGCTTTCAAAAGAGCCATGCCATGGCTTGCTGATGACTTTG CCCTGAAAGATGTGCAAAGTGCATTATTTCCAGGTCTGAGCCTAGTCCAATGGATGGCTA TGCAACAGAATCCTCAGATGCTAACAGCTGCGTCCCAAACAGTGCAATCACCGTACTTGA ACTCCAATGCATTGGCTATGCAGGATGTGATGGGTAGTAGCAACGAGGACCCAACAAAAA GATTGAACACACAGGCACAAAATATGGTTTTACCTAATTTACAGGTTGGCTCAAAAGTGG ATCACCCTGTAATGTCTCAACATCAACAGCAGCCACACCAACTATCACAACAGCAGCAGG TCCAGCCATCGCAGCAAAGTTCTGTGGTTTTACAGCAACATCAAGCCCAGTTGCTGCAGC AGAACGCCATTCACTTGCAGCAGCAGCAAGAACATCTCCAGCGGCAGCAGTCACAACCGG CACAGCAGTTGAAGGCTGCTTCAAGTCTGCATTCAGTGGAACAGCACAAGCTGAAAGAAC AGACTTCAGGTGGGCAGGTTGCCTCACAAGCACAAATGTTAAACCAGATTTTCCCACCAT CTTCATCGCAGCTACAACAGTTAGGTTTACCCAAGTCACCTACTCATCGCCAAGGGTTGA CAGGATTACCAATTGCAGGTTCTTTGCAGCAGCCCACACTAACTCAGACATCTCAAGTCC AGCAAGCAGCCGAATATCAGCAGGCCCTCCTACAGAGTCAGCAACAGCAACAGCAACTGC AACTGCAACAACTATCACAACCAGAAGTACAGCTGCAGCTGCTTCAAAAGATTCAACAAC AAAACATGCTATCTCAGCTGAACCCACAACATCAGTCCCAGTTGATTCAACAATTGTCTC AGAAAAGCCAGGAAATTCTACAGCAACAAATTTTGCAACATCAATTTGGTGGGTCTGATT CTATTGGTCAACTCAAGCAATCACCATCGCAGCAAGCTCCTTTAAACCACATGACAGGAT CTTTGACGCCCCAGCAACTTGTCAGATCACATTCGGCACTTGCTGAGAGTGGGGATCCAT CCAGTTCAACTGCTCCATCCACCAGCCGTATTTCTCCAATAAATTCGCTGAGTAGGGCAA ACCAAGGAAGCAGAAATTTAACTGACATGGTGGCAACACCACAAATTGACAACTTACTTC AGGAAATTCAAAGCAAGCCAGATAATCGAATTAAGAATGACATACAGAGCAAAGAAACAG TCCCTATACATAACCGACATCCAGTTTCTGATCAACTTGATGCATCATCTGCTACCTCCT TTTGTTTAGACGAGAGCCCACGAGAAGGTTTTTCCTTCCCTCCAGTTTGTTTGGATAACA ATGTTCAAGTTGATCCAAGAGATAACTTTCTTATTGCGGAAAATGTGGACGCATTGATGC CAGATGCCCTGTTGTCAAGAGGTATGGCTTCAGGAAAGGGCATGTGCACTCTGACTTCTG GACAAAGGGATCACAGGGATGTCGAGAATGAGCTATCATCTGCTGCATTCAGTTCCCAGT CATTTGGTGTGCCTGACATGTCCTTTAAGCCTGGATGTTCAAGTGACGTTGCTGTTACTG ATGCCGGAATGCCAAGCCAAGGTTTGTGGAATAATCAAACACAACGGATGAGAACTTTCA CTAAGGTTCAAAAGCGTGGTTCTGTGGGGAGATCAATTGATATCACAAGATATCGAGATT ATGATGAACTTAGGCATGATCTTGCATGCATGTTTGGTATCCAAGGTCAACTTGAAGATC CATATAGGATGGATTGGAAGCTAGTCTATGTTGATCATGAGAATGATATCCTTCTTGTCG GCGACGACCCTTGGGAGGAATTTGTGGGCTGTGTGAAGAGCATCAAAATACTCTCAGCTG CTGAAGTACAACAGATGAGCTTGGATGGTGACCTTGGTGGCGTCCCTCCACAAACACAGG CCTGTAGTGCCTCTGATGATGCAAATGCATGGAGAGGTTGAGGTTCCTGACAGTAAATAC TAAATTATCCTTACCATTCTTTTTAAGGATACTTGAGAGACTCAAGGATCAAATACACAC CTAGGGATCTAGAGCCAACTCACTGACAAATTGATCAAAATGCTTCGATTAGGCGGAGGA TGTTCAGTGAACCGCCTTGTTATGGAGCTCTTGACATTTTGTTCACACTAAAACTGGCAA CCTATCCTCATAGTCAGATTAATTTCTTCTTTTCTTTTCGGCATACAGAACTGATTTTCA GTTTCATAAGCTACCTATGTTTATCTGGGACTTGTTCATTGTAATCTTACAAGTTCATAA ACAATCTGACCGTATATACATGCTGTTGTATCTCCCAATGTAATACTCGGATGATTCTAT TGGTGTTTCCACTACAGAAGTAAAAAGTTGTATGGCCAAAGGCGTTCTATTGTCTG