Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0196600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:4897311:4900564:-1 gene:Os06g0196600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-ketoacyl-[acyl carrier protein] synthase I description:Beta-ketoacyl-[acyl carrier protein] synthase I, Root development (Os06t0196600-01)
Sequence	ATGCAGAGCCTCCTCCTCCCCACCTTCGCCGCGGCCTCCGCCGCCCCCCCGCGGAGGGGG CGCGTGCCTCCCGCCGGTCGCGCCTCGGTCTCCGTGCGCGCGTCCGCGTCCGCGGCGGCG GTGGCGCCGAGGAGGGAGACGGATCCGAGGAAGAGGGTGGTGATCACGGGGATGGGGCTG GTGTCCGTGTTCGGGAACGACGTCGACGCCTACTACGACCGCCTCCTCGCCGGGGAGAGC GGGATTGGCCCCATCGACCGCTTCGACGCCTCCAACTTCCCCACCCGCTTCGCCGGCCAG ATCCGGGGCTTCTCCTCCGAGGGCTACATCGACGGCAAGAACGACCGCCGCCTCGACGAC TGCCTCCGCTACTGCATCGTCAGCGGCAAGAAGGCCCTCGAGTCCGCCGGCCTCGCCCTC GGCTCCAAATCCATGGACAAGATTGAAAAGACTCGGGCTGGTGTACTTGTGGGCACCGGT ATGGGTGGTCTTACAGTGTTCTCTGATGGTGTTCAGAATCTTATTGAGAAGGGGCACAGA AAGATAACTCCATTCTTCATTCCGTATGCCATAACAAACATGGGATCTGCCCTTCTTGGA ATGGACATTGGTTTCATGGGTCCAAACTACTCCATCTCAACTGCATGTGCTACCTCGAAC TACTGTTTCTATGCTGCAGCAAACCATATTCGCAGAGGCGAAGCCGATGTGATGATTGCT GGTGGCACTGAAGCCGCAATTATTCCGATTGGTGTCGGTGGGTTTGTCGCGTGTAGAGCA CTTTCACAGAGGAACGATGACCCCAAAACAGCATCAAGACCTTGGGACCAAGACCGTGAT GGTTTTGTCATGGGTGAAGGAGCTGGAGTACTGGTCATGGAGAGCCTAGAACATGCAATG AAGCGTGACGCACCAATAATTGCGGAGTATTTAGGAGGTGCCGTGAACTGTGATGCTTAC CATATGACTGACCCGAGATCTGATGGCCTTGGTGTTTCGTCTTGCATTAAGCAAAGTCTT GCAGATGCTGGCGTTGCACCGGAGGAGGTCAACTACATAAATGCTCATGCAACGTCCACC CTAGCTGGTGATCTGGCAGAGGTGAACGCCATTAGGCAAGTCTTCAAGGATCCATCAGAG ATTAAAATAAATGCAACCAAGTCCATGATTGGACATTGCCTTGGTGCGGCTGGTGGCTTG GAAGCCATTGCAACTGTTAAAGCTATAACCACTGGATGGGTCCATCCAAGCATAAACCAG TTTAACCCGGAGCCAGCTGTTGAATTTGACACGGTACCTAATGTAAAAAAGCAACATGAA GTGAATGTTGGTATCTCGAATTCCTTTGGATTTGGTGGACACAATTCAGTTGTAGTATTT GCACCATTTAAGCCTTAA

Peptide Sequence

PEP ID	Os06t0196600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:4897311:4900564:-1 gene:Os06g0196600 transcript:Os06t0196600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-ketoacyl-[acyl carrier protein] synthase I description:Beta-ketoacyl-[acyl carrier protein] synthase I, Root development (Os06t0196600-01)
Sequence	MQSLLLPTFAAASAAPPRRGRVPPAGRASVSVRASASAAAVAPRRETDPRKRVVITGMGL VSVFGNDVDAYYDRLLAGESGIGPIDRFDASNFPTRFAGQIRGFSSEGYIDGKNDRRLDD CLRYCIVSGKKALESAGLALGSKSMDKIEKTRAGVLVGTGMGGLTVFSDGVQNLIEKGHR KITPFFIPYAITNMGSALLGMDIGFMGPNYSISTACATSNYCFYAAANHIRRGEADVMIA GGTEAAIIPIGVGGFVACRALSQRNDDPKTASRPWDQDRDGFVMGEGAGVLVMESLEHAM KRDAPIIAEYLGGAVNCDAYHMTDPRSDGLGVSSCIKQSLADAGVAPEEVNYINAHATST LAGDLAEVNAIRQVFKDPSEIKINATKSMIGHCLGAAGGLEAIATVKAITTGWVHPSINQ FNPEPAVEFDTVPNVKKQHEVNVGISNSFGFGGHNSVVVFAPFKP

Transcript Sequence

Transcript ID	Os06t0196600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4897311:4900564:-1 gene:Os06g0196600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-ketoacyl-[acyl carrier protein] synthase I description:Beta-ketoacyl-[acyl carrier protein] synthase I, Root development (Os06t0196600-01)
Sequence	GAGCCCAGACCTCCACCATCGCCACCACCTCCGCCTCGTTTCCATCGCCACCACCTCCTC CCGCCGCCGCCGCCGCCACCGCCGCGATGCAGAGCCTCCTCCTCCCCACCTTCGCCGCGG CCTCCGCCGCCCCCCCGCGGAGGGGGCGCGTGCCTCCCGCCGGTCGCGCCTCGGTCTCCG TGCGCGCGTCCGCGTCCGCGGCGGCGGTGGCGCCGAGGAGGGAGACGGATCCGAGGAAGA GGGTGGTGATCACGGGGATGGGGCTGGTGTCCGTGTTCGGGAACGACGTCGACGCCTACT ACGACCGCCTCCTCGCCGGGGAGAGCGGGATTGGCCCCATCGACCGCTTCGACGCCTCCA ACTTCCCCACCCGCTTCGCCGGCCAGATCCGGGGCTTCTCCTCCGAGGGCTACATCGACG GCAAGAACGACCGCCGCCTCGACGACTGCCTCCGCTACTGCATCGTCAGCGGCAAGAAGG CCCTCGAGTCCGCCGGCCTCGCCCTCGGCTCCAAATCCATGGACAAGATTGAAAAGACTC GGGCTGGTGTACTTGTGGGCACCGGTATGGGTGGTCTTACAGTGTTCTCTGATGGTGTTC AGAATCTTATTGAGAAGGGGCACAGAAAGATAACTCCATTCTTCATTCCGTATGCCATAA CAAACATGGGATCTGCCCTTCTTGGAATGGACATTGGTTTCATGGGTCCAAACTACTCCA TCTCAACTGCATGTGCTACCTCGAACTACTGTTTCTATGCTGCAGCAAACCATATTCGCA GAGGCGAAGCCGATGTGATGATTGCTGGTGGCACTGAAGCCGCAATTATTCCGATTGGTG TCGGTGGGTTTGTCGCGTGTAGAGCACTTTCACAGAGGAACGATGACCCCAAAACAGCAT CAAGACCTTGGGACCAAGACCGTGATGGTTTTGTCATGGGTGAAGGAGCTGGAGTACTGG TCATGGAGAGCCTAGAACATGCAATGAAGCGTGACGCACCAATAATTGCGGAGTATTTAG GAGGTGCCGTGAACTGTGATGCTTACCATATGACTGACCCGAGATCTGATGGCCTTGGTG TTTCGTCTTGCATTAAGCAAAGTCTTGCAGATGCTGGCGTTGCACCGGAGGAGGTCAACT ACATAAATGCTCATGCAACGTCCACCCTAGCTGGTGATCTGGCAGAGGTGAACGCCATTA GGCAAGTCTTCAAGGATCCATCAGAGATTAAAATAAATGCAACCAAGTCCATGATTGGAC ATTGCCTTGGTGCGGCTGGTGGCTTGGAAGCCATTGCAACTGTTAAAGCTATAACCACTG GATGGGTCCATCCAAGCATAAACCAGTTTAACCCGGAGCCAGCTGTTGAATTTGACACGG TACCTAATGTAAAAAAGCAACATGAAGTGAATGTTGGTATCTCGAATTCCTTTGGATTTG GTGGACACAATTCAGTTGTAGTATTTGCACCATTTAAGCCTTAACTTGCTGCATGTTACA CAAATCTTGGCCAGAATAGTAAATGTCTTTTCAGGAAGTTCTGAGTTATTCTGCATGTCT TTTCTTTGGGTGAAGCAACTGTTGATTTGACAGCCGGCAACGTTACAATGAACTGGATCT GAGATTAATTCCATTTTAGGCACTCCCATCTTCCATTGAAATTGAGAGCTCTGTATAACG TTGTTTTGCATAATTTGCAATTGATTCTACCTACTTCTGTATAATGGAAAATGTGGGAAT TTCTAGAATTGTCATGTAGAAGCAAAAGTTAGATCTCCTGTTCCATAGAAATGCTTGAGC CAAGGAATTGCTTGTCTGTAATTTGTATCTGGTCTAGAAAAATGTTCTCTTC