Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0195600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:4844553:4854690:-1 gene:Os06g0195600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAC domain protein 3. (Os06t0195600-01)
Sequence	ATGGCGGTGGAGGCGGAGGCGGAGGTGGAGGTGGAGGTGGAGGCGGGGGGATGCCTCCTG CAGAGCTTCGAGCTCTACGAGGCCGAGTCGAAATTCTATATTCTCGGAACTAACACTGAC AAAACATCATGGAAACTACTCAAGATTGATAGAATCGAACCATCAGAGCTCAACATTGAT GAGAGTTCAACTGTGTACTCACATAGTGGATATCTTGATCTGCTAAAGGTTCTTGATGAA GACCACAGGTCAACTGGTGGAGTAAAATTTGTTACAAAATGTTTTGGAATCATCGGTTTC ATTAAGTTCCTCGGACCTTATTACATGCTAATCATCACCGAGCAGAGAAAAATTGGGGCT ATATTTGGCCATCCAGTTTACCAAGTTACTAGGACTGCAATGATTGAGCTGTCAAATTCC GAGTCGAGGGCAAAATTTCTAAATTCCAAGGATGAAGACAGATACAAGAAGCTCTTGCAG ACAATTGATCTTAGAAAGGACTTCTTTTTTAGCCACTCGTATAATATCATGAGAAGTTTC CAGAAGAATTTTAATGATCCAAAGGAAGGATGGGACCTGTATGACACAATGTTTGTATGG AATGAGTTTCTAACACGAGGGGTTCGCAACATTCTAAAAAGTACCATATGGACTGTTGCG TTGGTCTATGGCTTTTTTAAACAGGATAAACTCGCAATATCTGGGAAAGACATTATGCTG ACGCTTGTTGCTAGACGCTCGAGGCATTATGCTGGCACCAGGTATTTAAAGAGAGGTGTG AATGACGAGGGTAGTGTAGCAAATGATGTTGAGACTGAGCAAATTATTTTTGAGGACATG CTTGGACCAAAGCAAATAAGCTCTGTTGTGCAGAACAGAGGTTCCATTCCCCTATTCTGG TCTCAGGAGACATCCAAGCTGAATCTTAAGCCTGATATCATATTGCATGAAAAGGACAAG AATTATGAAGCTACCAGACTTCATTTTGAAAATCTTAGGATAAGATATGGAAATCCTATA ATCATCCTAAACTTGATTAAGAAACGTGAGAGGAGGCCACGTGAATCTATACTCCGCAGT GAATTTGATAAAGCAATAAAGATTATAAATAATGATCTACCAGGGGAAAATCATCTGCGA TTTTTACATTGGGATCTTCATAAAAACTCTCAAAGAAAAAGTACAAATGCCCTCCAAATG CTTTTGAAAGTGGCTTTTGAAGCTCTGAACTTGACAGAGTTCTTTTACTATCAAGTTCCT CCAGCTCGAAGGGCTGAGAGTTCCTTCAATTTGCATGCTCCATTGAAGAATGGTTTTGGT CCTCATGAATGTGATGACAGCAACAATGATGATATCACAGACTGTATCGATAATATTGAT GATATGTCCCAAGAAGATACTTGTGGCAGTTCTGATACTTCTGGTAATGGAACTGCAGAA GATATAGCCGAGGGCAATGGATCTATATCAGTAAAGCCTCCAAAATTTCAAAAGGGTGTC CTACGTACGAACTGTATAGACTGTTTGGACCGTACAAATGTTGCTCAGTATGCGTATGGT TTAGCTGCTCTTGGACATCAGTTGCATGCACTTGGTTCTATAGAATCCCCTGAACTTGAT TTGGACTCCCCCTTGGCTCACCATTTGATGCATTTTTATGAGCGGATGGGTGACACACTT GCTGTACAGTATGGCGGTTCAGCTGCTCATAACAAGATATTCTCTGCAAAGAGAGGACAC TTAAAGTTCGCTATCCAGTCGCAAGAGTTCTTCAGGACACTGCAAAGATACTACAGTAAT GCATATATGGATGCTTACAAACAAGCAGCAATAAACTTATTTTTAGGATACTTCCAGCCA TGTGAAGGTGAACCTGCACTTTGGGAGTTAGAACCTGTTGCTGGGGAGGGTGTCCTTGGT GAGAATGCAAGTAAATTGATGAAAAGGGCAAGGTCAGATGGCAGCATTCTTCGGAAAAGC AACGCATCCATGTCCAGCAATGGTCGAAATGGAGTGTTAAAGTCATCATTTATTGATTCT AAAAGTGAGCTTCAATCTCCAAACAGTTCTTCTGATGCAATAAACGAAATTTCATCAGCA CCTGATAATACAGTTACAGTGTCAAAATCAAGGTATACTCCCACGGAACCTCATGTTAAG CATGTAAGCTGTGAGCTTGATTACTGCAATGGTTCTGGTGATTCAAATTTCCTGGACATT GACTGGCTTTCATCTTCAGACAACGAAAGGCCAACAACCATAAGTACTCCTGATGTGAAT GCTTCAGCCGATAGTGTTTCTGCTGGTGTATCCTCTAGGAGAACGGAAGATCATGCTGCA GAGATTCAGGCTCAGGGGTTATCGGAGCATTTTGTTCAGTGGATTGATCAAGGGGAGACC TTTTGGTTCTAA

Peptide Sequence

PEP ID	Os06t0195600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:4844553:4854690:-1 gene:Os06g0195600 transcript:Os06t0195600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAC domain protein 3. (Os06t0195600-01)
Sequence	MAVEAEAEVEVEVEAGGCLLQSFELYEAESKFYILGTNTDKTSWKLLKIDRIEPSELNID ESSTVYSHSGYLDLLKVLDEDHRSTGGVKFVTKCFGIIGFIKFLGPYYMLIITEQRKIGA IFGHPVYQVTRTAMIELSNSESRAKFLNSKDEDRYKKLLQTIDLRKDFFFSHSYNIMRSF QKNFNDPKEGWDLYDTMFVWNEFLTRGVRNILKSTIWTVALVYGFFKQDKLAISGKDIML TLVARRSRHYAGTRYLKRGVNDEGSVANDVETEQIIFEDMLGPKQISSVVQNRGSIPLFW SQETSKLNLKPDIILHEKDKNYEATRLHFENLRIRYGNPIIILNLIKKRERRPRESILRS EFDKAIKIINNDLPGENHLRFLHWDLHKNSQRKSTNALQMLLKVAFEALNLTEFFYYQVP PARRAESSFNLHAPLKNGFGPHECDDSNNDDITDCIDNIDDMSQEDTCGSSDTSGNGTAE DIAEGNGSISVKPPKFQKGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGSIESPELD LDSPLAHHLMHFYERMGDTLAVQYGGSAAHNKIFSAKRGHLKFAIQSQEFFRTLQRYYSN AYMDAYKQAAINLFLGYFQPCEGEPALWELEPVAGEGVLGENASKLMKRARSDGSILRKS NASMSSNGRNGVLKSSFIDSKSELQSPNSSSDAINEISSAPDNTVTVSKSRYTPTEPHVK HVSCELDYCNGSGDSNFLDIDWLSSSDNERPTTISTPDVNASADSVSAGVSSRRTEDHAA EIQAQGLSEHFVQWIDQGETFWF

Transcript Sequence

Transcript ID	Os06t0195600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4844553:4854690:-1 gene:Os06g0195600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAC domain protein 3. (Os06t0195600-01)
Sequence	ATCTCCCTCTCACGGCCTCGCGTCCTCCTCCTCCCAATTTTTTTTCTCCCCAAATTCCTC GCTCTCGAGCTCCCCGGATCCCGAAGGCGCGGCGATTTCTTCGATTCGGCCGCGGGAAGG AGGAGAGGTGCTCCGATTTGATTGCGGCGGGGCGCCGCCCGCCGCGGGGTGATTTTGGGC GGCCGGGGAATGCTCTACCTCAAGCAGCCGGGCGCGGATTTAGGGTTCCGGCCGGCGGCG GCGGCGGGGCTGTGATCTGCTGACCAGGTCGGCGGATGCGAGGTTGAGCCGTGGGTAGTC GGCCGGCCATGGCGGTGGAGGCGGAGGCGGAGGTGGAGGTGGAGGTGGAGGCGGGGGGAT GCCTCCTGCAGAGCTTCGAGCTCTACGAGGCCGAGTCGAAATTCTATATTCTCGGAACTA ACACTGACAAAACATCATGGAAACTACTCAAGATTGATAGAATCGAACCATCAGAGCTCA ACATTGATGAGAGTTCAACTGTGTACTCACATAGTGGATATCTTGATCTGCTAAAGGTTC TTGATGAAGACCACAGGTCAACTGGTGGAGTAAAATTTGTTACAAAATGTTTTGGAATCA TCGGTTTCATTAAGTTCCTCGGACCTTATTACATGCTAATCATCACCGAGCAGAGAAAAA TTGGGGCTATATTTGGCCATCCAGTTTACCAAGTTACTAGGACTGCAATGATTGAGCTGT CAAATTCCGAGTCGAGGGCAAAATTTCTAAATTCCAAGGATGAAGACAGATACAAGAAGC TCTTGCAGACAATTGATCTTAGAAAGGACTTCTTTTTTAGCCACTCGTATAATATCATGA GAAGTTTCCAGAAGAATTTTAATGATCCAAAGGAAGGATGGGACCTGTATGACACAATGT TTGTATGGAATGAGTTTCTAACACGAGGGGTTCGCAACATTCTAAAAAGTACCATATGGA CTGTTGCGTTGGTCTATGGCTTTTTTAAACAGGATAAACTCGCAATATCTGGGAAAGACA TTATGCTGACGCTTGTTGCTAGACGCTCGAGGCATTATGCTGGCACCAGGTATTTAAAGA GAGGTGTGAATGACGAGGGTAGTGTAGCAAATGATGTTGAGACTGAGCAAATTATTTTTG AGGACATGCTTGGACCAAAGCAAATAAGCTCTGTTGTGCAGAACAGAGGTTCCATTCCCC TATTCTGGTCTCAGGAGACATCCAAGCTGAATCTTAAGCCTGATATCATATTGCATGAAA AGGACAAGAATTATGAAGCTACCAGACTTCATTTTGAAAATCTTAGGATAAGATATGGAA ATCCTATAATCATCCTAAACTTGATTAAGAAACGTGAGAGGAGGCCACGTGAATCTATAC TCCGCAGTGAATTTGATAAAGCAATAAAGATTATAAATAATGATCTACCAGGGGAAAATC ATCTGCGATTTTTACATTGGGATCTTCATAAAAACTCTCAAAGAAAAAGTACAAATGCCC TCCAAATGCTTTTGAAAGTGGCTTTTGAAGCTCTGAACTTGACAGAGTTCTTTTACTATC AAGTTCCTCCAGCTCGAAGGGCTGAGAGTTCCTTCAATTTGCATGCTCCATTGAAGAATG GTTTTGGTCCTCATGAATGTGATGACAGCAACAATGATGATATCACAGACTGTATCGATA ATATTGATGATATGTCCCAAGAAGATACTTGTGGCAGTTCTGATACTTCTGGTAATGGAA CTGCAGAAGATATAGCCGAGGGCAATGGATCTATATCAGTAAAGCCTCCAAAATTTCAAA AGGGTGTCCTACGTACGAACTGTATAGACTGTTTGGACCGTACAAATGTTGCTCAGTATG CGTATGGTTTAGCTGCTCTTGGACATCAGTTGCATGCACTTGGTTCTATAGAATCCCCTG AACTTGATTTGGACTCCCCCTTGGCTCACCATTTGATGCATTTTTATGAGCGGATGGGTG ACACACTTGCTGTACAGTATGGCGGTTCAGCTGCTCATAACAAGATATTCTCTGCAAAGA GAGGACACTTAAAGTTCGCTATCCAGTCGCAAGAGTTCTTCAGGACACTGCAAAGATACT ACAGTAATGCATATATGGATGCTTACAAACAAGCAGCAATAAACTTATTTTTAGGATACT TCCAGCCATGTGAAGGTGAACCTGCACTTTGGGAGTTAGAACCTGTTGCTGGGGAGGGTG TCCTTGGTGAGAATGCAAGTAAATTGATGAAAAGGGCAAGGTCAGATGGCAGCATTCTTC GGAAAAGCAACGCATCCATGTCCAGCAATGGTCGAAATGGAGTGTTAAAGTCATCATTTA TTGATTCTAAAAGTGAGCTTCAATCTCCAAACAGTTCTTCTGATGCAATAAACGAAATTT CATCAGCACCTGATAATACAGTTACAGTGTCAAAATCAAGGTATACTCCCACGGAACCTC ATGTTAAGCATGTAAGCTGTGAGCTTGATTACTGCAATGGTTCTGGTGATTCAAATTTCC TGGACATTGACTGGCTTTCATCTTCAGACAACGAAAGGCCAACAACCATAAGTACTCCTG ATGTGAATGCTTCAGCCGATAGTGTTTCTGCTGGTGTATCCTCTAGGAGAACGGAAGATC ATGCTGCAGAGATTCAGGCTCAGGGGTTATCGGAGCATTTTGTTCAGTGGATTGATCAAG GGGAGACCTTTTGGTTCTAATATTGCTAGATGATTTCATCACTCATAGCCAAGCTAGACG ACGGCAGTCGTTATGATACCACTGCAAGGAGGCGTAAGATGTGAGACAATATCGCCCTTA CCATATTCTCCTTGTGACTCATGACTCTCCAAGGGGTCTGACCATCCTCCAGAGTCCTCC AGGGAAGTGTACCATTCTGTTTATTTGTTGAGCTTGATCACCGGTTATACCTCTAGGGGC GAGTAGATAGGCATTGTTCTTATTTTCTTAAAGGAAGGAAAGAAAGAAGGTAGGTAGTAT ATTATTCTTTTGATGTTGTACCATTGTTCAGCCATTCTCATTGTTGTAAATATATATATG ATGACCCAAGTGTTTTCCCTTTTTTCTTGAGTTGAGGTGGACATGAAAGCACCATTTTTC CCTCAACTTGTTTCTTTTCTTTCTTTTGCTGGGATCTTATGAGATCTTATGTACATGTAT TTCATTGCAACAGAAGATATGCTATTGTGTATTTTTGTAC