Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0194400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:4762004:4764420:1 gene:Os06g0194400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os06t0194400-01)
Sequence	ATGATCGAAGCGGAAAGCCAAATGGCGGAGGCGGCATCGTACGAGGAGCAGCGGAGGCGG CAGGTGGAGGCGAACAAGCGGAAGCTGGAGGAGCTCCGCCTCCACCACCTCTCCGCCGCC GTCCGCGAATCCGCCTCCAAGCCGTCGCCGGTGAAGCAGCGGAAGAGGAAGGCGCGTGCG CTGCCGGGCGCCGGCGAGGATGCCCCGCTCCGGCGGTCCGGCCGCGTCGCCAACCTCCCC GAGAAGCCCAAGTACCGCGACGAGTTCCAAGATTTCGAGAAGAGGATAAGGAGGTCTTAT GGCGGCAAGAGGAGGGATTTGTCCAATCGAGTTTACGCGACCGACGAGCAAAGGGACTAC GCCATCAACGCTGCTCAAGAGCTGGAAGAGGAGCTCGGCTCCGACTACCCAATCTTCGTC AAGCCCATGCTTCAGTCCCATGTCACTGGAGGGTTCTGGCTGAGCCTGCCGACGCATTTC AGCCGGAAGTATCTGCCGAAGCGCGACGAGACTATCCGTTTGGTGGATGAGGAGGATGAT GAGTTTGACACCCTCTATCTTGCCAACAAGAGGGGGCTCAGTGGAGGGTGGAGGGGGTTT TCCATTGCTCATAAGCTAGTTGATGGAGATTGTTTGGTGTTCCAACTTATCCAGCGCACG AAGTTCAAGGTCTACATAATCAGAGCAAGTTCCTACTATGAAACTGACGACTGA

Peptide Sequence

PEP ID	Os06t0194400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:4762004:4764420:1 gene:Os06g0194400 transcript:Os06t0194400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os06t0194400-01)
Sequence	MIEAESQMAEAASYEEQRRRQVEANKRKLEELRLHHLSAAVRESASKPSPVKQRKRKARA LPGAGEDAPLRRSGRVANLPEKPKYRDEFQDFEKRIRRSYGGKRRDLSNRVYATDEQRDY AINAAQELEEELGSDYPIFVKPMLQSHVTGGFWLSLPTHFSRKYLPKRDETIRLVDEEDD EFDTLYLANKRGLSGGWRGFSIAHKLVDGDCLVFQLIQRTKFKVYIIRASSYYETDD

Transcript Sequence

Transcript ID	Os06t0194400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4762004:4764420:1 gene:Os06g0194400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os06t0194400-01)
Sequence	ACTTCACCTTCCAATGATCGAAGCGGAAAGCCAAATGGCGGAGGCGGCATCGTACGAGGA GCAGCGGAGGCGGCAGGTGGAGGCGAACAAGCGGAAGCTGGAGGAGCTCCGCCTCCACCA CCTCTCCGCCGCCGTCCGCGAATCCGCCTCCAAGCCGTCGCCGGTGAAGCAGCGGAAGAG GAAGGCGCGTGCGCTGCCGGGCGCCGGCGAGGATGCCCCGCTCCGGCGGTCCGGCCGCGT CGCCAACCTCCCCGAGAAGCCCAAGTACCGCGACGAGTTCCAAGATTTCGAGAAGAGGAT AAGGAGGTCTTATGGCGGCAAGAGGAGGGATTTGTCCAATCGAGTTTACGCGACCGACGA GCAAAGGGACTACGCCATCAACGCTGCTCAAGAGCTGGAAGAGGAGCTCGGCTCCGACTA CCCAATCTTCGTCAAGCCCATGCTTCAGTCCCATGTCACTGGAGGGTTCTGGCTGAGCCT GCCGACGCATTTCAGCCGGAAGTATCTGCCGAAGCGCGACGAGACTATCCGTTTGGTGGA TGAGGAGGATGATGAGTTTGACACCCTCTATCTTGCCAACAAGAGGGGGCTCAGTGGAGG GTGGAGGGGGTTTTCCATTGCTCATAAGCTAGTTGATGGAGATTGTTTGGTGTTCCAACT TATCCAGCGCACGAAGTTCAAGGTCTACATAATCAGAGCAAGTTCCTACTATGAAACTGA CGACTGATGTAGAGGCTCCAAATATCTGTGATTGGGGCACAGGTCTTCTAGTGAATTAGG TTGACCTGAATTGGAGATTGCTAGGCCATCTTCAGTCTTTTGAGTGATGAACAATGTTCA AAATATTAACTACGTATTAGGTTACTTATGGACTAGCCATCCTCAGTCTTTTGATGGCAA ACAATGTCAGAAGTATTAAATTGGCATATAATTTACCAGCTAATAGGCTAAGTTGTTAGA TTTACTTTGAGCTTGCACAGTTCAGAAATCTGCACTATGTAAGGGATATCATTGCAATTG GTAACTGAGGATGCTTTTTT