Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0194000-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:4731370:4733911:1 gene:Os06g0194000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 71 description:AP2/ERF transcription factor, Drought resistance, Control of lignin biosynthesis (Os06t0194000-01);Similar to Ethylene-responsive transcription factor 3 (Ethylene-responsive element binding factor 3 homolog) (EREBP-5) (NtERF5). (Os06t0194000-02)
Sequence	ATGTGCGGCGGCGCCATCCTCTCCGACCTCATCCCGCCGCCGCGGCGGGTCACCGCCGGC GACCTCTGGCTGGAGAAGACCAAGAAGCAGCAGCAGCAGAAGAAGAAGAACAAGGGCGCG AGGAGGCTGCCACTGCGCCAAGAGGAGGAGGATGATTTCGAGGCCGACTTCGAGGAGTTC GAGGTGGATTCCGGCGAGTGGGAGGTGGAGTCCGACGCCGACGAGGCCAAGCCGCTCGCC GCGCCCCGGAGCGGCTTCGCTAAAGGTGGATTGAAAAACACTACTGTTGCTGGTGCTGAT GGGCCTGCAGCAAGGTCTGCTAAAAGGAAGAGAAAGAACCAATTCAGGGGTATCCGCCAG CGGCCATGGGGCAAATGGGCTGCGGAAATCAGAGATCCTCGCAAAGGTGTCCGCGTCTGG CTTGGCACCTTCAACTCTCCTGAGGAAGCTGCCAGAGCTTATGATGCTGAAGCACGAAGG ATTCGAGGCAAGAAGGCCAAGGTCAATTTCCCAGATGGGGCTCCAGTGGCTTCTCAGAGG AGTCATGCTGAGCCCTCCTCCATGAACATGCCTGCTTTCAGCATCGAAGAGAAGCCGGCC GTCATGTCAGCAGGCAACAAAACCATGTACAACACAAATGCTTATGCCTACCCTGCTGTT GAGTACACCTTACAGGAGCCATTTGTGCAGATTCAGAATGTCTCATTTGTTCCTGCAATG AACGCGATTGAGGATACTTTCGTGAACCTGTCCTCTGATCAAGGGAGCAACTCCTTTGGT TGCTCGGACTTTAGCCAGGAGAATGATATCAAGACCCCTGACATAACTTCCATGCTTGCA CCGACCATGACAGGTGTTGATGACTCCGCATTCCTCCAGAACAATGCCAGTGATGCAATG GTACCTCCTGTGATGGGGAATGCTAGCATTGATCTTGCTGACCTGGAGCCGTACATGAAA TTTCTGATCGATGGTGGTTCGGATGAGTCGATTGACACCCTTCTGAGCTCTGATGGATCT CAGGATGTGGCCAGTAGCATGGACCTTTGGAGCTTCGATGACATGCCCGTGTCGGCCGAG TTCTACTGA

Peptide Sequence

PEP ID	Os06t0194000-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:4731370:4733911:1 gene:Os06g0194000 transcript:Os06t0194000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 71 description:AP2/ERF transcription factor, Drought resistance, Control of lignin biosynthesis (Os06t0194000-01);Similar to Ethylene-responsive transcription factor 3 (Ethylene-responsive element binding factor 3 homolog) (EREBP-5) (NtERF5). (Os06t0194000-02)
Sequence	MCGGAILSDLIPPPRRVTAGDLWLEKTKKQQQQKKKNKGARRLPLRQEEEDDFEADFEEF EVDSGEWEVESDADEAKPLAAPRSGFAKGGLKNTTVAGADGPAARSAKRKRKNQFRGIRQ RPWGKWAAEIRDPRKGVRVWLGTFNSPEEAARAYDAEARRIRGKKAKVNFPDGAPVASQR SHAEPSSMNMPAFSIEEKPAVMSAGNKTMYNTNAYAYPAVEYTLQEPFVQIQNVSFVPAM NAIEDTFVNLSSDQGSNSFGCSDFSQENDIKTPDITSMLAPTMTGVDDSAFLQNNASDAM VPPVMGNASIDLADLEPYMKFLIDGGSDESIDTLLSSDGSQDVASSMDLWSFDDMPVSAE FY

Transcript Sequence

Transcript ID	Os06t0194000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4731370:4733911:1 gene:Os06g0194000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 71 description:AP2/ERF transcription factor, Drought resistance, Control of lignin biosynthesis (Os06t0194000-01);Similar to Ethylene-responsive transcription factor 3 (Ethylene-responsive element binding factor 3 homolog) (EREBP-5) (NtERF5). (Os06t0194000-02)
Sequence	ACAAATCTCACGCACTGTCTCTCGTTCGCGCAAAGCACGCTGCTTTTCTCCGCTTTGCGA GCACCATAGCCTAGCCCACCATGTGCGGCGGCGCCATCCTCTCCGACCTCATCCCGCCGC CGCGGCGGGTCACCGCCGGCGACCTCTGGCTGGAGAAGACCAAGAAGCAGCAGCAGCAGA AGAAGAAGAACAAGGGCGCGAGGAGGCTGCCACTGCGCCAAGAGGAGGAGGATGATTTCG AGGCCGACTTCGAGGAGTTCGAGGTGGATTCCGGCGAGTGGGAGGTGGAGTCCGACGCCG ACGAGGCCAAGCCGCTCGCCGCGCCCCGGAGCGGCTTCGCTAAAGGTGGATTGAAAAACA CTACTGTTGCTGGTGCTGATGGGCCTGCAGCAAGGTCTGCTAAAAGGAAGAGAAAGAACC AATTCAGGGGTATCCGCCAGCGGCCATGGGGCAAATGGGCTGCGGAAATCAGAGATCCTC GCAAAGGTGTCCGCGTCTGGCTTGGCACCTTCAACTCTCCTGAGGAAGCTGCCAGAGCTT ATGATGCTGAAGCACGAAGGATTCGAGGCAAGAAGGCCAAGGTCAATTTCCCAGATGGGG CTCCAGTGGCTTCTCAGAGGAGTCATGCTGAGCCCTCCTCCATGAACATGCCTGCTTTCA GCATCGAAGAGAAGCCGGCCGTCATGTCAGCAGGCAACAAAACCATGTACAACACAAATG CTTATGCCTACCCTGCTGTTGAGTACACCTTACAGGAGCCATTTGTGCAGATTCAGAATG TCTCATTTGTTCCTGCAATGAACGCGATTGAGGATACTTTCGTGAACCTGTCCTCTGATC AAGGGAGCAACTCCTTTGGTTGCTCGGACTTTAGCCAGGAGAATGATATCAAGACCCCTG ACATAACTTCCATGCTTGCACCGACCATGACAGGTGTTGATGACTCCGCATTCCTCCAGA ACAATGCCAGTGATGCAATGGTACCTCCTGTGATGGGGAATGCTAGCATTGATCTTGCTG ACCTGGAGCCGTACATGAAATTTCTGATCGATGGTGGTTCGGATGAGTCGATTGACACCC TTCTGAGCTCTGATGGATCTCAGGATGTGGCCAGTAGCATGGACCTTTGGAGCTTCGATG ACATGCCCGTGTCGGCCGAGTTCTACTGAGGGGTTTGGGGTGTAGCAACTGGTGCCTGTA TATATAAGGACAAATGGAATAAACATTCTGGACATCCAAGAAGCGGCATGTGTCTGTCGG GCGCTTCTAGTTGCGCTATATAGCTATGTTAGTATGTTAGTATGTGCTGTGTCTAGCTTA GATGCTGAAGTCTCAAGTACTATTTGGCAGTGAAACTATCTATCTGTAACTGCTATATGA GGCTGGAACAAGTTACTTAGCTTCTACCTTATCTGTACTTGCTATAGTGGCTGTGAACCT TGTGGATCTGAACTCTGAAGCCAATGTTTACTATATAATGTGGTTGGTTTTATAAACTCT AGTTGATTTGGACCCCTGTCAATGGTCATGCTATGGCTGGGGATAAGAACCATTGATGAT CATATTTGACTAGAAACGCTGCTTCCAAAATATCCCATAAAGTAAAGCTGAACTTGTACT AATGTTCTTGCACAAGTTGCAATAATGTTGCCTTATGGAAAAACAGTTTCCGGACC