Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0193200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:4700512:4703042:1 gene:Os06g0193200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 19 description:Similar to Pectin methylesterase 8 (Fragment). (Os06t0193200-01)
Sequence	ATGGCGGCGATCTCGCCACGTCTGGTTGTGTTCGTCGCCGTCCTCCTCCTCCTCCTCCTC GCCACGGCGACCACCACGCAATGCCACCGTCACGGCAAGCGACACCGCCACCACGCCGTC GCCGCCAAGGGCGCCGCGGCGGCGGCGGCCACGCCGGGGGTGACAGACGTCCATGCCGTC TGCCGCACGACGCCGCACCAGGACTCCTGCCTCGCGTCGACGGCCGCGCACCTCGACGCC GTCTCCGCGGAGGTGGTGGCAGCGGCGTCGGCCATCTCGGTGCAGCTGCTCCCGCCGAAC ATCCTGTCCGTCGCGCTCGCGTCGCTCCGGGGCGCGCTCGCCGCCGTGTCGTCGCTCTCC CCGGCGCTCTCCTCCGCGCTCTCGCCGCCGTCGTCGGGCGCGTCCCCGCTCCGGCGCGGC GCGGCGCAGGACTGCCTCGAGCTCCACGCCGCCACGCTCGCCTCCCTGTCGCGGTCCGCC TCGCTGCTCGCGTCCCCCGGCGAGGGCCTCCCCGCCGTGCGCGCCCACCTCGCGGCGGCG CTCGCCAACAAGGCCACCTGCCTCGACGGGCTCGACGGCGCCGCGCCGTCGTCCGGCCTC CTCGCGTCCCTCGACGACGCCTACGCCCACGTCACCAACTCCCTCTCCCTCGTCGCCGGC CGCCGCGGCGGGGGCGGATCGGCGGCGAGCTTCGCCGCCGCCGTCGCCAACATCATCCAC CACAACCGCCGCCTCCTCGACGACGACGACAACGACGACTACAACGGCGGGAACGACGAC GACGACAACAGCAACAACTCCGGCGAGAACACGGTGGTGATCACGGTGGCGAAGGACGGG AGCGGGAACTACCGGACGGTGGGGGAGGCGGTGGCGGCGGCGCCGAACAACAGCGCGGCG AGGACGGTGATCCGAGTGAGGGCCGGGACGTACGAGGAGAACGTGGAGGTGCCACCGTAC AAGACGAACATCGCCCTCGTCGGCGACGGCCGCGGCGCCACCGTCATCACCGGCAGCCGC AGCGCCGCCGACGGCTGGACCACCTTCCGCTCCGCCACCTTCGGGGTGTCAGGCGAAGGG TTCATGGCTCGGGACGTGACGTTCCGGAACACGGCGGGGGCGGCGAAGGGGCAGGCGGTG GCGCTGCGGGTGAGCGCGGACATGGCGGCGGCGTACCGGTGCGGCGTCGAGGGCCACCAG GACTCTCTCTACGCGCACTCGTTCCGCCAGTTCTACCGCGAGTGCGCCGTCTCCGGCACC GTCGACCTCGTCTTCGGCGACGCCGCCGCCGTCCTCCAGGCGTGCGAGCTCGTCGCCGGC GCCCCCGTCGCCGGCCAGTCCAACGTCCTCACGGCGCAGGCGCGCGGCGACCCCAACGAG GACACGGGCTTCTCCGTGCACAACTGCACGGTGGTCGCCTCGCCGGAGCTCCTCGCCAGC GGCGTCAGCACGCGCACCTTCCTGGGCCGGCCGTGGCGGCCCTACGCCCGCGCCGTCGTC ATGGACTCCTACCTCGGCCCGCTCGTCGACCGGGCCGGCTGGGTCGAGTGGCCCGGCGCC GAGCCCGGCCGCGCCGAGACGGTGTACTTCGGTGAGTATGGGAATGGCGGGCCGGGCGCC GCCATGGACGGCCGCGTCGGATGGGCCGGGTTCCATGATATGGGCTACGACGAGGCGGCC CAGTTCTCCGTCGACAACCTCATCTCCGGCGACCAGTGGCTCGCCGCCACCTCCTTCCCC TACGACGACGACGTCTAA

Peptide Sequence

PEP ID	Os06t0193200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:4700512:4703042:1 gene:Os06g0193200 transcript:Os06t0193200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 19 description:Similar to Pectin methylesterase 8 (Fragment). (Os06t0193200-01)
Sequence	MAAISPRLVVFVAVLLLLLLATATTTQCHRHGKRHRHHAVAAKGAAAAAATPGVTDVHAV CRTTPHQDSCLASTAAHLDAVSAEVVAAASAISVQLLPPNILSVALASLRGALAAVSSLS PALSSALSPPSSGASPLRRGAAQDCLELHAATLASLSRSASLLASPGEGLPAVRAHLAAA LANKATCLDGLDGAAPSSGLLASLDDAYAHVTNSLSLVAGRRGGGGSAASFAAAVANIIH HNRRLLDDDDNDDYNGGNDDDDNSNNSGENTVVITVAKDGSGNYRTVGEAVAAAPNNSAA RTVIRVRAGTYEENVEVPPYKTNIALVGDGRGATVITGSRSAADGWTTFRSATFGVSGEG FMARDVTFRNTAGAAKGQAVALRVSADMAAAYRCGVEGHQDSLYAHSFRQFYRECAVSGT VDLVFGDAAAVLQACELVAGAPVAGQSNVLTAQARGDPNEDTGFSVHNCTVVASPELLAS GVSTRTFLGRPWRPYARAVVMDSYLGPLVDRAGWVEWPGAEPGRAETVYFGEYGNGGPGA AMDGRVGWAGFHDMGYDEAAQFSVDNLISGDQWLAATSFPYDDDV

Transcript Sequence

Transcript ID	Os06t0193200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4700512:4703042:1 gene:Os06g0193200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 19 description:Similar to Pectin methylesterase 8 (Fragment). (Os06t0193200-01)
Sequence	TCAAGCTCACTCTCAGTCGAGTACTCGAGCTAGCTTAGCCATGGCGGCGATCTCGCCACG TCTGGTTGTGTTCGTCGCCGTCCTCCTCCTCCTCCTCCTCGCCACGGCGACCACCACGCA ATGCCACCGTCACGGCAAGCGACACCGCCACCACGCCGTCGCCGCCAAGGGCGCCGCGGC GGCGGCGGCCACGCCGGGGGTGACAGACGTCCATGCCGTCTGCCGCACGACGCCGCACCA GGACTCCTGCCTCGCGTCGACGGCCGCGCACCTCGACGCCGTCTCCGCGGAGGTGGTGGC AGCGGCGTCGGCCATCTCGGTGCAGCTGCTCCCGCCGAACATCCTGTCCGTCGCGCTCGC GTCGCTCCGGGGCGCGCTCGCCGCCGTGTCGTCGCTCTCCCCGGCGCTCTCCTCCGCGCT CTCGCCGCCGTCGTCGGGCGCGTCCCCGCTCCGGCGCGGCGCGGCGCAGGACTGCCTCGA GCTCCACGCCGCCACGCTCGCCTCCCTGTCGCGGTCCGCCTCGCTGCTCGCGTCCCCCGG CGAGGGCCTCCCCGCCGTGCGCGCCCACCTCGCGGCGGCGCTCGCCAACAAGGCCACCTG CCTCGACGGGCTCGACGGCGCCGCGCCGTCGTCCGGCCTCCTCGCGTCCCTCGACGACGC CTACGCCCACGTCACCAACTCCCTCTCCCTCGTCGCCGGCCGCCGCGGCGGGGGCGGATC GGCGGCGAGCTTCGCCGCCGCCGTCGCCAACATCATCCACCACAACCGCCGCCTCCTCGA CGACGACGACAACGACGACTACAACGGCGGGAACGACGACGACGACAACAGCAACAACTC CGGCGAGAACACGGTGGTGATCACGGTGGCGAAGGACGGGAGCGGGAACTACCGGACGGT GGGGGAGGCGGTGGCGGCGGCGCCGAACAACAGCGCGGCGAGGACGGTGATCCGAGTGAG GGCCGGGACGTACGAGGAGAACGTGGAGGTGCCACCGTACAAGACGAACATCGCCCTCGT CGGCGACGGCCGCGGCGCCACCGTCATCACCGGCAGCCGCAGCGCCGCCGACGGCTGGAC CACCTTCCGCTCCGCCACCTTCGGGGTGTCAGGCGAAGGGTTCATGGCTCGGGACGTGAC GTTCCGGAACACGGCGGGGGCGGCGAAGGGGCAGGCGGTGGCGCTGCGGGTGAGCGCGGA CATGGCGGCGGCGTACCGGTGCGGCGTCGAGGGCCACCAGGACTCTCTCTACGCGCACTC GTTCCGCCAGTTCTACCGCGAGTGCGCCGTCTCCGGCACCGTCGACCTCGTCTTCGGCGA CGCCGCCGCCGTCCTCCAGGCGTGCGAGCTCGTCGCCGGCGCCCCCGTCGCCGGCCAGTC CAACGTCCTCACGGCGCAGGCGCGCGGCGACCCCAACGAGGACACGGGCTTCTCCGTGCA CAACTGCACGGTGGTCGCCTCGCCGGAGCTCCTCGCCAGCGGCGTCAGCACGCGCACCTT CCTGGGCCGGCCGTGGCGGCCCTACGCCCGCGCCGTCGTCATGGACTCCTACCTCGGCCC GCTCGTCGACCGGGCCGGCTGGGTCGAGTGGCCCGGCGCCGAGCCCGGCCGCGCCGAGAC GGTGTACTTCGGTGAGTATGGGAATGGCGGGCCGGGCGCCGCCATGGACGGCCGCGTCGG ATGGGCCGGGTTCCATGATATGGGCTACGACGAGGCGGCCCAGTTCTCCGTCGACAACCT CATCTCCGGCGACCAGTGGCTCGCCGCCACCTCCTTCCCCTACGACGACGACGTCTAACC GTACGAGCATTGTCACCGACGAAATCCATGTCCAATCAATGCATTGTAGTATTGCACTAT TACTACACCTGTATTAATGAATTATTACCACGCG