Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0188100-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:4443021:4446510:-1 gene:Os06g0188100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF250 domain containing protein. (Os06t0188100-01)
Sequence	ATGGGGGCGGAGACCGGCGAGCCCAGCTCCTTCCTCAGCTTATCTGCTGCCTTCTCCTAT GGAATTGCATCTATGGCAATGGTATTCGTGAACAAAGCAATTCTTATGCAGTATGCTCAC TCAATGACTCTTCTCACCTTACAGCAAATAGCTACAGCACTTATCATACATTTTGGTCAA ATTCTAGGAGTGTCTAAAAGAAAAGATTTCAGTATGGCAACAGGAAGGAAGCTTCTTCCG CTGTCGATCTTCTACAATGCAAATGTTGCATTTGCGCTGGCAAGCCTAAAAGGGGTTAAC ATTCCTATGTATATTGCAATTAAAAGGCTCACTCCCCTTGCTGTACTGGTGGCTGGGTGT TTACGGGGAAAGGGGAAACCACCAACACAGGTGTCCCTTTCAGTCATCTGCACGGCCGCT GGAGTCCTTATTGCAGCTCTTGGAGATTTTTCCTTTGACTTGTATGGATACTCCATGGCT CTAACATCAGTCTTCTTCCAGACAATGTATTTGATTCTTGTGGAGAAATCAGGAGCAGAG GATGGTCTTTCCTCCGTTGAGTTGATGTTTTATAACAGCGTATTATCACTACCCTTTCTG TTTTTCATCATTATAGCAACAGGAGAATTCCCCTATTCTCTTTCAGTACTCTCTGAAAAG ACGGCCTCGCTAACATTCAGTGCTATTCTTCTTGTTTCGCTGGTGATGGGTATCGTCCTG AATTTCACCATGTTTTGGTGCACGATAGTGAACTCCGCTCTGACGACAACAATAGTAGGA GTTCTCAAGGGTGTTGGATCTACTACCCTGGGTTTCGTTCTGCTGGGAGGTGTGGAAGTG CATACTCTCAACGTTACTGGATTGGTGATCAATACATTTGGAGGTGTCTGGTATTCATAT GCGAAGTATATGCAGAAGAGGAAGATGCCAAAGAGGATTGCACCTGATGTAGAGGCACAT CCTCACAAGTAA

Peptide Sequence

PEP ID	Os06t0188100-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:4443021:4446510:-1 gene:Os06g0188100 transcript:Os06t0188100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF250 domain containing protein. (Os06t0188100-01)
Sequence	MGAETGEPSSFLSLSAAFSYGIASMAMVFVNKAILMQYAHSMTLLTLQQIATALIIHFGQ ILGVSKRKDFSMATGRKLLPLSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGC LRGKGKPPTQVSLSVICTAAGVLIAALGDFSFDLYGYSMALTSVFFQTMYLILVEKSGAE DGLSSVELMFYNSVLSLPFLFFIIIATGEFPYSLSVLSEKTASLTFSAILLVSLVMGIVL NFTMFWCTIVNSALTTTIVGVLKGVGSTTLGFVLLGGVEVHTLNVTGLVINTFGGVWYSY AKYMQKRKMPKRIAPDVEAHPHK

Transcript Sequence

Transcript ID	Os06t0188100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4443021:4446510:-1 gene:Os06g0188100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF250 domain containing protein. (Os06t0188100-01)
Sequence	TCCCCCTCCGTCTCCAGATCTCCCCCCACCCACATTCCCCAGCACCTGTCTTGCTCCGGT CCATGTAGAGCACCCCGCCTTGTCGGAACCGCGAGCTCGAGGAGAGAGAGATGGGGGCGG AGACCGGCGAGCCCAGCTCCTTCCTCAGCTTATCTGCTGCCTTCTCCTATGGAATTGCAT CTATGGCAATGGTATTCGTGAACAAAGCAATTCTTATGCAGTATGCTCACTCAATGACTC TTCTCACCTTACAGCAAATAGCTACAGCACTTATCATACATTTTGGTCAAATTCTAGGAG TGTCTAAAAGAAAAGATTTCAGTATGGCAACAGGAAGGAAGCTTCTTCCGCTGTCGATCT TCTACAATGCAAATGTTGCATTTGCGCTGGCAAGCCTAAAAGGGGTTAACATTCCTATGT ATATTGCAATTAAAAGGCTCACTCCCCTTGCTGTACTGGTGGCTGGGTGTTTACGGGGAA AGGGGAAACCACCAACACAGGTGTCCCTTTCAGTCATCTGCACGGCCGCTGGAGTCCTTA TTGCAGCTCTTGGAGATTTTTCCTTTGACTTGTATGGATACTCCATGGCTCTAACATCAG TCTTCTTCCAGACAATGTATTTGATTCTTGTGGAGAAATCAGGAGCAGAGGATGGTCTTT CCTCCGTTGAGTTGATGTTTTATAACAGCGTATTATCACTACCCTTTCTGTTTTTCATCA TTATAGCAACAGGAGAATTCCCCTATTCTCTTTCAGTACTCTCTGAAAAGACGGCCTCGC TAACATTCAGTGCTATTCTTCTTGTTTCGCTGGTGATGGGTATCGTCCTGAATTTCACCA TGTTTTGGTGCACGATAGTGAACTCCGCTCTGACGACAACAATAGTAGGAGTTCTCAAGG GTGTTGGATCTACTACCCTGGGTTTCGTTCTGCTGGGAGGTGTGGAAGTGCATACTCTCA ACGTTACTGGATTGGTGATCAATACATTTGGAGGTGTCTGGTATTCATATGCGAAGTATA TGCAGAAGAGGAAGATGCCAAAGAGGATTGCACCTGATGTAGAGGCACATCCTCACAAGT AACATCATTCAGTAGCTCTGAAGCATAGATATAGTAGCTATGTAGTTAAGCTTCATTCTT TAAGCAGATAAATTATTGAAATGCCATACCAGTTCCAATCCAATTTTTACCTGAACTCCC ATTCTAACATCAGCAAAATAGCTGGTGCAGTGAAGGAAGCTAATTAACTTTTTTTTTTGT GAAAGACCAGTTGATCACCTGGCTGTAGTGTACTCCAATATCAGTCCCAGTAATTCAATA GTAGTAATACAGGTTTCGCATGG