Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0187300-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:4409926:4411390:1 gene:Os06g0187300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL2C. (Os06t0187300-00)
Sequence	CCGCAATCAGTAGTTTCATTGCATTGCGTACATCAGCATGACGTCATCACCTACCATCTC TTCTTCTCTACGACGTCGCCTCGTATAACAACAAGCTCTTCTTCTTCTCGTGTTACCATT TGTGACAACAATGGACACGTCGGCGTCCACCTCGCCGCCGCCGCCGCGCTCTGTGCTCAG CACCATCGAGGACAAGATGAGCCCGGGCGTCCTCCTCATCATCGCCATCCTCGCCGTCGT CTTCTTCCTCTTCGGCTTGCTCAACCTGCTGATCCAGAACCTGCTCCGGATGCGCCGGGC GCGGCGGCGGCGGCGGCGCGTGGGCGACGGCGGCGGCGGCGTCGGCATGGGCAGCCCGAC GGCACCTTCATCGACGCGCTCCCCGTCTTCGTCTACCGCGCCGTCGTCGGCGCCGGGCTC CGCAAGGACGACCCGTTCGACTGCGCCGTGTGCCTGTGCGAGTTCGCCGGCGACGACAAG CTCCGCCTCCTCCCGACGTGCGGCCACGCGTTCCACGTGCCCTGCATCGACGCCTGGCTG CTGTCGCACTCCACGTGCCCCATCTGCCGCGGCAGCGTCCTCGCCGCCGCCGCCGCCGCC GACGACGACGACGACTCGTCGGCGTCCACCCCGGTAGCGCGGCGCGTGCTCGACTCGGAG AGCCTCGGCGAGACGTTCGCCAACAATGGAGGTGGGGACAGCGAGGGGTCTTCTCCCAAG GCGGCGGCGGCGGAGGAGGAGGAGGTCGTCGAGGTGAAGCTTGGCAAGCTCAAGTGCATC GACGGCAATGGCAATGCCGGCGACCTCGCCGTCGTCAAAGGCACCACCACCAGCAACGAT GGCGACATCGGCGGCGGCGGCAGGGGAGATCTTGGACAGAGACGGTGCTTCTCCATGGGA TCCTACGAGTACGTCATGGACGAGCACGCCGCGCTCCGCGTCGCCGTCAGGACGCCCAAG CGGAGGCCGCCGGCGAGGTCGAGGTCTCGCCGCCGGCTCGCGCTGTCGGAGTGCGACTTC GCGGGCTCCGCCTCCAAGAAGGGCGCGTGGGAAGCGGCGGTGATAGAGGCCGCGTCGGCG GACGCCGCGGCGGCGAGGCTGAACAGGGACAGCTTCTCCGTGTCCAAGATCTGGATGACG TCAGCCACTAGGAAGGAAGATGTCCGGACGGCGGCGGAATTGGCCGGCGGAGGGAGGCGT GCGGCGTCGTTCCGGTGGCCGGCGATGGCCGAGGCCAGCAAGAAGCATGGCGGGATCAAC GACGAGCGCCGCGACGTCGAGGCCGGCGGCAATGGCGACTCGTCTCTCGCCGACGAGCGG CCGTCGTTGGCGAGGACGGCGCTGCAGTACATCGTCGGCGGCGGCGGCGGCGGGCGGCAG CAGAGCAGCCGAGTTGGAAGCCATTCTTGA

Peptide Sequence

PEP ID	Os06t0187300-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:4409926:4411390:1 gene:Os06g0187300 transcript:Os06t0187300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL2C. (Os06t0187300-00)
Sequence	PQSVVSLHCVHQHDVITYHLFFSTTSPRITTSSSSSRVTICDNNGHVGVHLAAAAALCAQ HHRGQDEPGRPPHHRHPRRRLLPLRLAQPADPEPAPDAPGAAAAAARGRRRRRRRHGQPD GTFIDALPVFVYRAVVGAGLRKDDPFDCAVCLCEFAGDDKLRLLPTCGHAFHVPCIDAWL LSHSTCPICRGSVLAAAAAADDDDDSSASTPVARRVLDSESLGETFANNGGGDSEGSSPK AAAAEEEEVVEVKLGKLKCIDGNGNAGDLAVVKGTTTSNDGDIGGGGRGDLGQRRCFSMG SYEYVMDEHAALRVAVRTPKRRPPARSRSRRRLALSECDFAGSASKKGAWEAAVIEAASA DAAAARLNRDSFSVSKIWMTSATRKEDVRTAAELAGGGRRAASFRWPAMAEASKKHGGIN DERRDVEAGGNGDSSLADERPSLARTALQYIVGGGGGGRQQSSRVGSHS

Transcript Sequence

Transcript ID	Os06t0187300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4409926:4411390:1 gene:Os06g0187300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL2C. (Os06t0187300-00)
Sequence	CCGCAATCAGTAGTTTCATTGCATTGCGTACATCAGCATGACGTCATCACCTACCATCTC TTCTTCTCTACGACGTCGCCTCGTATAACAACAAGCTCTTCTTCTTCTCGTGTTACCATT TGTGACAACAATGGACACGTCGGCGTCCACCTCGCCGCCGCCGCCGCGCTCTGTGCTCAG CACCATCGAGGACAAGATGAGCCCGGGCGTCCTCCTCATCATCGCCATCCTCGCCGTCGT CTTCTTCCTCTTCGGCTTGCTCAACCTGCTGATCCAGAACCTGCTCCGGATGCGCCGGGC GCGGCGGCGGCGGCGGCGCGTGGGCGACGGCGGCGGCGGCGTCGGCATGGGCAGCCCGAC GGCACCTTCATCGACGCGCTCCCCGTCTTCGTCTACCGCGCCGTCGTCGGCGCCGGGCTC CGCAAGGACGACCCGTTCGACTGCGCCGTGTGCCTGTGCGAGTTCGCCGGCGACGACAAG CTCCGCCTCCTCCCGACGTGCGGCCACGCGTTCCACGTGCCCTGCATCGACGCCTGGCTG CTGTCGCACTCCACGTGCCCCATCTGCCGCGGCAGCGTCCTCGCCGCCGCCGCCGCCGCC GACGACGACGACGACTCGTCGGCGTCCACCCCGGTAGCGCGGCGCGTGCTCGACTCGGAG AGCCTCGGCGAGACGTTCGCCAACAATGGAGGTGGGGACAGCGAGGGGTCTTCTCCCAAG GCGGCGGCGGCGGAGGAGGAGGAGGTCGTCGAGGTGAAGCTTGGCAAGCTCAAGTGCATC GACGGCAATGGCAATGCCGGCGACCTCGCCGTCGTCAAAGGCACCACCACCAGCAACGAT GGCGACATCGGCGGCGGCGGCAGGGGAGATCTTGGACAGAGACGGTGCTTCTCCATGGGA TCCTACGAGTACGTCATGGACGAGCACGCCGCGCTCCGCGTCGCCGTCAGGACGCCCAAG CGGAGGCCGCCGGCGAGGTCGAGGTCTCGCCGCCGGCTCGCGCTGTCGGAGTGCGACTTC GCGGGCTCCGCCTCCAAGAAGGGCGCGTGGGAAGCGGCGGTGATAGAGGCCGCGTCGGCG GACGCCGCGGCGGCGAGGCTGAACAGGGACAGCTTCTCCGTGTCCAAGATCTGGATGACG TCAGCCACTAGGAAGGAAGATGTCCGGACGGCGGCGGAATTGGCCGGCGGAGGGAGGCGT GCGGCGTCGTTCCGGTGGCCGGCGATGGCCGAGGCCAGCAAGAAGCATGGCGGGATCAAC GACGAGCGCCGCGACGTCGAGGCCGGCGGCAATGGCGACTCGTCTCTCGCCGACGAGCGG CCGTCGTTGGCGAGGACGGCGCTGCAGTACATCGTCGGCGGCGGCGGCGGCGGGCGGCAG CAGAGCAGCCGAGTTGGAAGCCATTCTTGA