Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0186900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:4388233:4391751:-1 gene:Os06g0186900 gene_biotype:protein_coding transcript_biotype:protein_coding description:TIP49, C-terminal domain containing protein. (Os06t0186900-01)
Sequence	ATGGCGGAGCTGAAGCGGCTGTCGGAGAGCCGCGACCTGACGCGGATCGAGCGCATCGGG GCGCACTCCCACATCCGGGGGCTGGGGCTGGACTCCTCGCTGGAGGCCCGCGGCTCGTCG GAGGGGATGGTCGGGCAGCTCCCCGCGCGGCGCGCCGCGGGGCTCATCCTGCAGCTCATC CGCCAGGGGAAGATCGCCGGCCGCGCCGTGCTCCTCGCCGGCCAGCCCGGGACCGGGAAG ACCGCCCTCGCCATGGGCATCGCCAAGTCCCTCGGCGCCGAGACGCCCTTCGCCTCCGTC GCCGCGTCCGAGCTCTTCTCCCTCGACCTCTCCAAGACCGAGGCGCTCACCCAGGCCTTC CGCCGCTCCATCGGCGTCCGCATCAAGGAGGAGGCGGAGATCATCGAGGGCGAGGTCGTT GAGATCTCGATCGACCGCCCCGTCTCCGCCGCAGCCGCCGCCGGCAGCTCCGCGCCTTCC GGTGTCGCCGCGGCTGGCAAGACCGGGCGCCTCACGCTCAAGACCACGGACATGGAGACC GTGTACGAGCTCGGCGGCAAGATGATTGAGGCCCTGGGGAAGGAGAAGGTGCAGAGCGGG GATGTGGTTGCGCTCGACAAGGCCTCCGGGAAGGTGACCAAGCTTGGCCGCTCAATCGGG AGGTCGCGGGATTACGATGCTGTTGGTCCTCACACCAAGTTCGTCAAGTGCCCCGAGGGC GAGCTCCAGAAGCGCAAGGAGGTCGTGCATTGTGTCACCTTACATGAAATTGATGTCATC AATAGCCGGACACAAGGTTTTCTTGCACTTTTCACTGGTGACACTGGTGAAATTCGTGCA GAGGTTCGAGAGCAGATTGATACAAAAGTTGCTGAGTGGAGGGAGGAAGGGAAGGCTGAG ATTGTCCCTGGTGTTCTGTTTATTGATGAAGTCCACATGCTAGATATCGAATGCTTCTCC TTCCTAAACCGTGCATTGGAAAATGACATGGCTCCAATTCTAGTCATTGCAACTAACCGA GGGATCACATCCATACGTGGGACAAACTACCGATCACCACATGGGATACCACCTGATTTC CTTGATCGTCTGTTAATCATCACGACACAGCCTTACACCGAGGATGATATCCGGAAGATC CTAGACATCAGGTGCGATGAAGAAGATGTGGAAATGTCTGCAGATGCTAAGGTTTTGCTC ACAAAGATAGGAGTGGAGACGTCCCTGAGGTATGCTATCCACCTGATCACTTCGGCTGCA TTAGCTTGCCAGAAACGCAAGGGTAAGGTTGTGGAGATGGAGGATATAAGCAGGGTCTAC CAGCTGTTCCTGGACGTCAAGAGATCGACGCAGTACTTGATGGAGTATCAGAGCCAGTAC ATGTTCAATGAAGTGCCGGGTGAAGCAGGAGATGATGCCATGCAGTCTTAG

Peptide Sequence

PEP ID	Os06t0186900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:4388233:4391751:-1 gene:Os06g0186900 transcript:Os06t0186900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:TIP49, C-terminal domain containing protein. (Os06t0186900-01)
Sequence	MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSLEARGSSEGMVGQLPARRAAGLILQLI RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF RRSIGVRIKEEAEIIEGEVVEISIDRPVSAAAAAGSSAPSGVAAAGKTGRLTLKTTDMET VYELGGKMIEALGKEKVQSGDVVALDKASGKVTKLGRSIGRSRDYDAVGPHTKFVKCPEG ELQKRKEVVHCVTLHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAE IVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVIATNRGITSIRGTNYRSPHGIPPDF LDRLLIITTQPYTEDDIRKILDIRCDEEDVEMSADAKVLLTKIGVETSLRYAIHLITSAA LACQKRKGKVVEMEDISRVYQLFLDVKRSTQYLMEYQSQYMFNEVPGEAGDDAMQS

Transcript Sequence

Transcript ID	Os06t0186900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4388233:4391751:-1 gene:Os06g0186900 gene_biotype:protein_coding transcript_biotype:protein_coding description:TIP49, C-terminal domain containing protein. (Os06t0186900-01)
Sequence	ATATCCATCCACTCAACCCAACCCAAGCTGGCTGGCAAAACCCTAGAACTCGTTCCCCCC CTTTCGCCTTAAACCTTCTTCTCTTTTAGTACCCTCGGGAAGCCAAAAGCACCTCGTCGG CGGCGGCGGCGGGTGGTGGCCATGGCGGAGCTGAAGCGGCTGTCGGAGAGCCGCGACCTG ACGCGGATCGAGCGCATCGGGGCGCACTCCCACATCCGGGGGCTGGGGCTGGACTCCTCG CTGGAGGCCCGCGGCTCGTCGGAGGGGATGGTCGGGCAGCTCCCCGCGCGGCGCGCCGCG GGGCTCATCCTGCAGCTCATCCGCCAGGGGAAGATCGCCGGCCGCGCCGTGCTCCTCGCC GGCCAGCCCGGGACCGGGAAGACCGCCCTCGCCATGGGCATCGCCAAGTCCCTCGGCGCC GAGACGCCCTTCGCCTCCGTCGCCGCGTCCGAGCTCTTCTCCCTCGACCTCTCCAAGACC GAGGCGCTCACCCAGGCCTTCCGCCGCTCCATCGGCGTCCGCATCAAGGAGGAGGCGGAG ATCATCGAGGGCGAGGTCGTTGAGATCTCGATCGACCGCCCCGTCTCCGCCGCAGCCGCC GCCGGCAGCTCCGCGCCTTCCGGTGTCGCCGCGGCTGGCAAGACCGGGCGCCTCACGCTC AAGACCACGGACATGGAGACCGTGTACGAGCTCGGCGGCAAGATGATTGAGGCCCTGGGG AAGGAGAAGGTGCAGAGCGGGGATGTGGTTGCGCTCGACAAGGCCTCCGGGAAGGTGACC AAGCTTGGCCGCTCAATCGGGAGGTCGCGGGATTACGATGCTGTTGGTCCTCACACCAAG TTCGTCAAGTGCCCCGAGGGCGAGCTCCAGAAGCGCAAGGAGGTCGTGCATTGTGTCACC TTACATGAAATTGATGTCATCAATAGCCGGACACAAGGTTTTCTTGCACTTTTCACTGGT GACACTGGTGAAATTCGTGCAGAGGTTCGAGAGCAGATTGATACAAAAGTTGCTGAGTGG AGGGAGGAAGGGAAGGCTGAGATTGTCCCTGGTGTTCTGTTTATTGATGAAGTCCACATG CTAGATATCGAATGCTTCTCCTTCCTAAACCGTGCATTGGAAAATGACATGGCTCCAATT CTAGTCATTGCAACTAACCGAGGGATCACATCCATACGTGGGACAAACTACCGATCACCA CATGGGATACCACCTGATTTCCTTGATCGTCTGTTAATCATCACGACACAGCCTTACACC GAGGATGATATCCGGAAGATCCTAGACATCAGGTGCGATGAAGAAGATGTGGAAATGTCT GCAGATGCTAAGGTTTTGCTCACAAAGATAGGAGTGGAGACGTCCCTGAGGTATGCTATC CACCTGATCACTTCGGCTGCATTAGCTTGCCAGAAACGCAAGGGTAAGGTTGTGGAGATG GAGGATATAAGCAGGGTCTACCAGCTGTTCCTGGACGTCAAGAGATCGACGCAGTACTTG ATGGAGTATCAGAGCCAGTACATGTTCAATGAAGTGCCGGGTGAAGCAGGAGATGATGCC ATGCAGTCTTAGTGGGATATTGGTTACAGACTTTACGGTTGGGTTGGTTTTACGGTTCAT TATGGATACCCATTGGTCTTCTAGATGAATAGGGGTAAGCGTAAGATGACTTACCCTGAC AAACATTGCTCTGTGGGTGCAGTAAATTGTGTTAGTGCTGTAGCTAGATTTAAGAATTGA ATGTATCTTGTCTTCATCCCGGTTTGGAGCAGTC