Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0185900-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:4321654:4325071:1 gene:Os06g0185900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTATHIONE PEROXIDASE 4 description:Similar to Glutathione peroxidase. (Os06t0185900-01)
Sequence

ATGGCGTCCACCACCACCACCACGGCGGCGGCCGCGGCCCGCTTCACCTGCCTCGCGCCG
GCCACGCGCCCCGCCTCCGCCTCCGCCTCCGCGGGCCGCTTCCTCCTCCCGGCGCGGCAG
TGGGGGGCGGCGACGACGCACGGGAGCGCGGCGGTGCCCGTCGTCGCGGCGCCGTCGCGG
AGGTGGGCGCCAGGGGTCGCCTACGCCACCGCCGCCACCGGGAAGAGCGTCCACGACTTC
ACCGTCAAGGACATTGATGGAAAAGATGTTGCGCTTAGCAAGTTCAAGGGAAGGGCGCTG
CTAATTGTTAATGTTGCATCTCAGTGTGGGCTGACAACAGCAAATTACACGGAACTATCT
CATCTTTATGAGAAGTACAAGACTCAAGGATTTGAGATTCTTGCATTTCCTTGCAATCAG
TTTGGTGCACAAGAACCTGGGTCAAACCCGCAGATTAAGCAGTTTGCTTGTACAAGGTTT
AAAGCTGAATTTCCTATTTTTGACAAGGTTGATGTCAACGGGCCTAACACAGCCCCTATT
TATAAGTTTCTTAAGTCGAGTGCTGGAGGATTTTTGGGTGATCTTGTGAAATGGAATTTT
GAGAAGTTCTTGGTGGACAAAACTGGAAAAGTTGTTGAGAGATACCCACCTACAACTTCA
CCATTCCAGATTGAGAAGGACATCCAGAAACTCCTTGCGGCATAA

Peptide Sequence

PEP ID

Os06t0185900-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:4321654:4325071:1 gene:Os06g0185900 transcript:Os06t0185900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTATHIONE PEROXIDASE 4 description:Similar to Glutathione peroxidase. (Os06t0185900-01)
Sequence

MASTTTTTAAAAARFTCLAPATRPASASASAGRFLLPARQWGAATTHGSAAVPVVAAPSR
RWAPGVAYATAATGKSVHDFTVKDIDGKDVALSKFKGRALLIVNVASQCGLTTANYTELS
HLYEKYKTQGFEILAFPCNQFGAQEPGSNPQIKQFACTRFKAEFPIFDKVDVNGPNTAPI
YKFLKSSAGGFLGDLVKWNFEKFLVDKTGKVVERYPPTTSPFQIEKDIQKLLAA

Transcript Sequence

Transcript ID

Os06t0185900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:4321654:4325071:1 gene:Os06g0185900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTATHIONE PEROXIDASE 4 description:Similar to Glutathione peroxidase. (Os06t0185900-01)
Sequence

CACTTCCTCTCCTCTCCCCTCGACACAGCCACACGCGGCGCACGCCAGCGCGAGCCACAT
GGCGTCCACCACCACCACCACGGCGGCGGCCGCGGCCCGCTTCACCTGCCTCGCGCCGGC
CACGCGCCCCGCCTCCGCCTCCGCCTCCGCGGGCCGCTTCCTCCTCCCGGCGCGGCAGTG
GGGGGCGGCGACGACGCACGGGAGCGCGGCGGTGCCCGTCGTCGCGGCGCCGTCGCGGAG
GTGGGCGCCAGGGGTCGCCTACGCCACCGCCGCCACCGGGAAGAGCGTCCACGACTTCAC
CGTCAAGGACATTGATGGAAAAGATGTTGCGCTTAGCAAGTTCAAGGGAAGGGCGCTGCT
AATTGTTAATGTTGCATCTCAGTGTGGGCTGACAACAGCAAATTACACGGAACTATCTCA
TCTTTATGAGAAGTACAAGACTCAAGGATTTGAGATTCTTGCATTTCCTTGCAATCAGTT
TGGTGCACAAGAACCTGGGTCAAACCCGCAGATTAAGCAGTTTGCTTGTACAAGGTTTAA
AGCTGAATTTCCTATTTTTGACAAGGTTGATGTCAACGGGCCTAACACAGCCCCTATTTA
TAAGTTTCTTAAGTCGAGTGCTGGAGGATTTTTGGGTGATCTTGTGAAATGGAATTTTGA
GAAGTTCTTGGTGGACAAAACTGGAAAAGTTGTTGAGAGATACCCACCTACAACTTCACC
ATTCCAGATTGAGAAGGACATCCAGAAACTCCTTGCGGCATAAGTACTAGAGGTCACACT
TCAGCTAAGCTCTTCTGTACATATGCCTTGCCTCATAATTAGAGTTTTACTTGATTATAT
ATCATTTTTTTCTTGTGTAAAATTACTCACCGGTTATATATATGTGCACGTATATAGTTG
TAACATGAGACTTATAGGATATCAAATCTGTAAGCTTATCTGGCCCCTGTAACCGTCTCT
GTTGCAGCATCCTTTTTGTTCC