Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0185800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:4315723:4319249:-1 gene:Os06g0185800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0185800-01)
Sequence	ATGCCTCCTCCGCGCCGCCGCCCGCCCTCCGCCGCCGACGCCGCCGCCCTCCGCCGCCCC TACCTCCGCCTCGTCGCGCTCTCCTCCACGCTCCGCCACCTCGACCAGATCCTCGCCGTC TCCCTCGCCTCCGGCCACTACCCGCTCGACCCCGCCCCGGCCACCTCCCTCCTCCTCCGC TACGCCTCGCTCCGCGCCCCCACCGGCCACCTCCTCCGCCTCTTCCGCGGCTTCCCCCGC CCCGACCGGTTCCTCCGCAACGCGCTCCTCCGCTCCCTCCCGTCGCTCCGCCCCCGCCTC CTCTTCCCCTGCCCCGACTCCTTCTCCTTCGCGTTCGCCGCCACCTCGCTCGCCGCCTTG TGCTCCCGTGGAGGCGGCGCCGCGTCGTCTTCCGCGGCGCGCGCGCTGCACGCGCTCGCT GTGGCTGCGGGCTACGCGGCGGACACGTTCGTGGCGTCCGCATTGGCCAAGCTGTACTTC GTGCTGTCCAGGGTCGACCATGCACGCAAGGTGTTCGACACGGTGCCTTCGCCGGATACC GTCCTGTGGAACACGCTGCTGGCTGGGCTTTCCGGTTCGGAGGCCGTGGAGTCATTCGCG CGGATGGTGTGTGATGGGTCGGTGCGGCCTGACGCGACCACGCTGGCTTCCGTCCTGCCA GCCGCGGCGGAGGTGGCAGATGTAACAATGGGAAGGTGCGTGCATTCGTTCGCAGAGAAA TGCGGGTTGGCAGAGCATGAGCATGTTCTTACCGGGCTCATCTCGCTGTACTCCAAGTGC GGGGATGTGGAATCAGCACGGTGTCTCTTTGACATGATGGAGAAGCCAGATTTAGTTGCC TACAATGCTTTAATCTCTGGTTATTCTGTGAATGGCATGGTTGGTTCATCAGTTAATCTC TTTACTGAGTTGATGACCCTGGGGTTGTGGCCAAACTCGAGCACACTGGTGGCACTGATT CCAGTGCACAGTCCATTTGGGCATGATCTGCTTGCTCAATGTTTACATGGATTTGTCCTC AAGTCTGGGTTTACTGCCAATTCTCCAGTGTCAACAGCAATTACAACTTTGCACTGTAGG TTAAATGATATGGAGTCTGCAAGAAAGGCCTTTGATACGATGCCAGAGAAGACCATGGAA TCATGGAATGCAATGATATCAGGGTATGCTCAGAATGGCTTGACAGAGATGGCAGTGGCA CTCTTTGAGCAAATGGTGAAGCTTAATGTGCGACCGAATCCAATCACAATCTCAAGCACT CTTTCCGCATGTGCACAGCTTGGAGCTTTGTCCCTGGGGAAGTGGCTGCACAGGATTATC ACTGAGGAGGACTTGGAGCCCAATGTCTATGTCATGACAGCGCTCATCGACATGTATGCA AAATGTGGAAGCATTTCTGAAGCTCGGAGAATCTTCAACACTATGGATAACAAGAATGTG GTCTCGTGGAATGCAATGATAGCTGGATATGGCCTTCATGGCCAAGGTGCTGAAGCTTTG AAGCTCTACAAGGACATGCTGGATGCACATCTTCTTCCAACAAGTGCTACCTTCCTGTCA GTACTCTATGCATGCAGCCATGGAGGGTTGGTTGAGGAAGGGTGGAAAGTTTTCCGGTCA ATGACCGATGATTATGCGATCAATCCAGGTATTGAGCACTGCACATGCATGGTGGACCTC CTTGGCAGAGCTGGCCAGCTCAAGGAGGCTTTTGAGCTCATCTCTGAATTCCCCAAGAGC GCTGTCGGACCTGGCGTATGGGGGGCATTGCTTGGCGCTTGCATGGTTCATAAGGATAGT GATCTTGCAAAATTGGCCTCCCAGAAGTTATTCGAACTTGATCCAGAAAACAGCGGCTAC TATGTTCTGCTCTCTAATCTGCACACATCCAAGAAGCAATACTCTGAAGCAGCTGTGGTA AGGCAGGAGGCAAAGAGCAGGAAGCTGGTAAAAACACCAGGGTATACTCTAATCGAGATA GGCAATAAGCCACATGTTTTCATGGCCGGTGACCGTGCCCACCCACAGTCTGAGGCCATC TATTCGTATTTGGAGAAGCTAACTGCAAAGATGATTGAGGCTGGATACCGACCAGAGACA GAGGCAGCATTGTATGATGTCGAGGAGGAAGAGAAGGAGCACATGGTGAAAGTGCATAGC GAAAAGTTGGCAATTGCCTTTGGATTACTCAGTACTGAACCGGGGACGGAAATCAGGATC ATAAAGAATCTTAGGGTGTGCCTAGACTGCCACAACGCCACCAAGTTCATATCCAAGGTG ACACAGAGGCTGATTGTGGTTAGGGATGCTTCACGGTTTCATCATTTCAGAGATGGGGTT TGCTCCTGTGGAGATTACTGGTGA

Peptide Sequence

PEP ID	Os06t0185800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:4315723:4319249:-1 gene:Os06g0185800 transcript:Os06t0185800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0185800-01)
Sequence	MPPPRRRPPSAADAAALRRPYLRLVALSSTLRHLDQILAVSLASGHYPLDPAPATSLLLR YASLRAPTGHLLRLFRGFPRPDRFLRNALLRSLPSLRPRLLFPCPDSFSFAFAATSLAAL CSRGGGAASSSAARALHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDT VLWNTLLAGLSGSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEK CGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNL FTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCR LNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISST LSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNV VSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRS MTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDS DLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEI GNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHS EKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGV CSCGDYW

Transcript Sequence

Transcript ID	Os06t0185800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4315723:4319249:-1 gene:Os06g0185800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0185800-01)
Sequence	ATCGTCTCCCTCCCTCACCGCCGCGCGTGTCGATGCCTCCTCCGCGCCGCCGCCCGCCCT CCGCCGCCGACGCCGCCGCCCTCCGCCGCCCCTACCTCCGCCTCGTCGCGCTCTCCTCCA CGCTCCGCCACCTCGACCAGATCCTCGCCGTCTCCCTCGCCTCCGGCCACTACCCGCTCG ACCCCGCCCCGGCCACCTCCCTCCTCCTCCGCTACGCCTCGCTCCGCGCCCCCACCGGCC ACCTCCTCCGCCTCTTCCGCGGCTTCCCCCGCCCCGACCGGTTCCTCCGCAACGCGCTCC TCCGCTCCCTCCCGTCGCTCCGCCCCCGCCTCCTCTTCCCCTGCCCCGACTCCTTCTCCT TCGCGTTCGCCGCCACCTCGCTCGCCGCCTTGTGCTCCCGTGGAGGCGGCGCCGCGTCGT CTTCCGCGGCGCGCGCGCTGCACGCGCTCGCTGTGGCTGCGGGCTACGCGGCGGACACGT TCGTGGCGTCCGCATTGGCCAAGCTGTACTTCGTGCTGTCCAGGGTCGACCATGCACGCA AGGTGTTCGACACGGTGCCTTCGCCGGATACCGTCCTGTGGAACACGCTGCTGGCTGGGC TTTCCGGTTCGGAGGCCGTGGAGTCATTCGCGCGGATGGTGTGTGATGGGTCGGTGCGGC CTGACGCGACCACGCTGGCTTCCGTCCTGCCAGCCGCGGCGGAGGTGGCAGATGTAACAA TGGGAAGGTGCGTGCATTCGTTCGCAGAGAAATGCGGGTTGGCAGAGCATGAGCATGTTC TTACCGGGCTCATCTCGCTGTACTCCAAGTGCGGGGATGTGGAATCAGCACGGTGTCTCT TTGACATGATGGAGAAGCCAGATTTAGTTGCCTACAATGCTTTAATCTCTGGTTATTCTG TGAATGGCATGGTTGGTTCATCAGTTAATCTCTTTACTGAGTTGATGACCCTGGGGTTGT GGCCAAACTCGAGCACACTGGTGGCACTGATTCCAGTGCACAGTCCATTTGGGCATGATC TGCTTGCTCAATGTTTACATGGATTTGTCCTCAAGTCTGGGTTTACTGCCAATTCTCCAG TGTCAACAGCAATTACAACTTTGCACTGTAGGTTAAATGATATGGAGTCTGCAAGAAAGG CCTTTGATACGATGCCAGAGAAGACCATGGAATCATGGAATGCAATGATATCAGGGTATG CTCAGAATGGCTTGACAGAGATGGCAGTGGCACTCTTTGAGCAAATGGTGAAGCTTAATG TGCGACCGAATCCAATCACAATCTCAAGCACTCTTTCCGCATGTGCACAGCTTGGAGCTT TGTCCCTGGGGAAGTGGCTGCACAGGATTATCACTGAGGAGGACTTGGAGCCCAATGTCT ATGTCATGACAGCGCTCATCGACATGTATGCAAAATGTGGAAGCATTTCTGAAGCTCGGA GAATCTTCAACACTATGGATAACAAGAATGTGGTCTCGTGGAATGCAATGATAGCTGGAT ATGGCCTTCATGGCCAAGGTGCTGAAGCTTTGAAGCTCTACAAGGACATGCTGGATGCAC ATCTTCTTCCAACAAGTGCTACCTTCCTGTCAGTACTCTATGCATGCAGCCATGGAGGGT TGGTTGAGGAAGGGTGGAAAGTTTTCCGGTCAATGACCGATGATTATGCGATCAATCCAG GTATTGAGCACTGCACATGCATGGTGGACCTCCTTGGCAGAGCTGGCCAGCTCAAGGAGG CTTTTGAGCTCATCTCTGAATTCCCCAAGAGCGCTGTCGGACCTGGCGTATGGGGGGCAT TGCTTGGCGCTTGCATGGTTCATAAGGATAGTGATCTTGCAAAATTGGCCTCCCAGAAGT TATTCGAACTTGATCCAGAAAACAGCGGCTACTATGTTCTGCTCTCTAATCTGCACACAT CCAAGAAGCAATACTCTGAAGCAGCTGTGGTAAGGCAGGAGGCAAAGAGCAGGAAGCTGG TAAAAACACCAGGGTATACTCTAATCGAGATAGGCAATAAGCCACATGTTTTCATGGCCG GTGACCGTGCCCACCCACAGTCTGAGGCCATCTATTCGTATTTGGAGAAGCTAACTGCAA AGATGATTGAGGCTGGATACCGACCAGAGACAGAGGCAGCATTGTATGATGTCGAGGAGG AAGAGAAGGAGCACATGGTGAAAGTGCATAGCGAAAAGTTGGCAATTGCCTTTGGATTAC TCAGTACTGAACCGGGGACGGAAATCAGGATCATAAAGAATCTTAGGGTGTGCCTAGACT GCCACAACGCCACCAAGTTCATATCCAAGGTGACACAGAGGCTGATTGTGGTTAGGGATG CTTCACGGTTTCATCATTTCAGAGATGGGGTTTGCTCCTGTGGAGATTACTGGTGATTCA ATTCAGCTGAATGAAGTGCCTCTGGTCCCGAGCATATGATTGACTTATTCTGGTGATGAA AGAAACGATCGTCTCTTACTCTTTGGAAGAGTATCTGAGCCACTGGGATCAAGAATTGCA ACCATAGAAAGCCAATTTTCATTGGACCAGGAGAATTTCAGAACTGACCGATAAACTAAC ATAGCAGGTTACAGATTCAATTTCGTAGTGTTGGAACAAGCACATTTGTAATGCATCACA AAGTGAATCTTTTGCCAATTGGCCATTGGCGTTGGATTTAAATGGCATAACTTGACTTAG GAAGAGGAAAACAGTATGTCAGTCTATGCCTCTATAAGTGTTTCTCTCGCCAGTAGAATG ATGAGAGAAGTCATCTCACGAACTACGAGGGAAACACAAGCTTTGTAACAGTCTGCAAGT GCCCAATAGGATGGTGAAAGAAGTCACAAAAAAATTACTCCAGGTCAAATGCGATCTATA TCAGTTGCTTGCTTTTCCTTTAACAAATCTACACCTATACATTTTATGCCTAACATGCTG AAAGGACTGCAGTATCTCAGCATCGATTGTGCTCCGTTTGCTTTTGGGGTTTCGTTGTCT TGATCATTTGAAAATTCTTCAGCAGATGGGCGATAAGTGCATCTCCAGTTCTCTATATGC ATGTTCACTTGTGTCAACTATCGGCTTCTATGCCCATTCCAACTGCTTCAAGGTTCACAT GCATCCTGATGAATAGAAGATGGGCAGGTTGCTTCAATGCTTTGAACTTTGAAGCTTTGT ATCAATCTTGAGACAAATTTGATGGTTGTGATAGTGCATGTACATAATCAAACTTGTACA TGTGGGAAAACAGTTCTTGCAGATGGGTGTCATCTTTCCAACTAGAAGCCTTCCTGTTGC AATTGGACACAGTTATATTAGCGTCTTTCAAGCAATATTACTATATTTGTGAAATATAGT CAATTTATATTATTGTGCAGTAGTAGCAGGAGCCAAATATTTATCTTTGAACTGTAAGTA TGAAGAAATGATTGTTTAAGTAGCTTGGTTGATCAAAAGATTAAGAGTAATGTATGAGAA ATGTCGATGACTGTTAGGCTTCCTGAGAGAGGAGATAACTTCCAAAC