Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0185300-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:4286708:4287890:1 gene:Os06g0185300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PUTRESCINE HYDROXYCINNAMOYL TRANSFERASE 2 description:Transferase family protein. (Os06t0185300-01)
Sequence

ATGGCCACGGTGGAGGTGTTGACGTCGGAGGTGGTCGCCCCGGCGGAGGAGACGCCGGCG
GGCGCCGTGTGGCTGTCCAACCTCGACCTCGCCGCGCGGCGCGGGTACACGCCGACGGTG
TACTTCTACCGGCGGAACGGCGACGACGAGGCGGCGTTCTTCGCGGCGGACGCCGTGAGG
GACGGCCTCGCCAGGGCTCTGGTGCCGTTCTACCCGCTCGCCGGCCGGCTCGGGCTCGCC
GGCGGCGGCGAAGACGGGCGCGTCCAGATCGACTGCACCGGCGAGGGCGCGGTGTTCGTC
ACGGCGAGGTCCGGGCACTACGCGCTGGACGACCTGATGAACGAGTTCGTGCCGTGCGAC
GAGATGCGCGACCTGTTCGTGCCCCCGACGCCGCCGCCGAACCCGCCGTGCGCGCTGCTG
CTGGTGCAGGTCACGCACCTGCGGTGCGGCGGCGTCGTGCTCGGCATGGCGCTGCACCAC
TCGGTGGTGGACGCGAGGAGCGCGGCGCACTTCGCGGAGACGTGGGCGAGCATCGTGCGC
GGCGCGCCCGCCGGGGACGCGCCCGTGCCGCCGTGCTTCGACCACAAGCTGCTCGCCGCG
CGGCCGGCCCGCGCGGTGCTGTACGACCACCCGGAGTACAAGCCCGAGCCGGCGCCGGCG
CCGGCGCACGCCGCCACGGCGTCCACGTACGCGAGCGCCATCATCACGCTGACGAAGCAG
CAGGTGGGCGCGCTGAAGGCGGCGTGCGCGGGGGCGTCCACGTTCCGCGCGGTGGTGGCG
CTGGTGTGGCAGTGCGCGTGCCGCGCGCGTTCGCTGCCGCCGGACAAGGCAAACCTATTC
CTTCTCTATAAGTACATCTCCGAAGATTGGGTCGACATACAACTTAATATTCAACAAAGG
GATAATTGCATCTATGCCCCTACTTTGAAAGCCAATTGCTGTTTTACCCCCACTTTTTAG

Peptide Sequence

PEP ID

Os06t0185300-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:4286708:4287890:1 gene:Os06g0185300 transcript:Os06t0185300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PUTRESCINE HYDROXYCINNAMOYL TRANSFERASE 2 description:Transferase family protein. (Os06t0185300-01)
Sequence

MATVEVLTSEVVAPAEETPAGAVWLSNLDLAARRGYTPTVYFYRRNGDDEAAFFAADAVR
DGLARALVPFYPLAGRLGLAGGGEDGRVQIDCTGEGAVFVTARSGHYALDDLMNEFVPCD
EMRDLFVPPTPPPNPPCALLLVQVTHLRCGGVVLGMALHHSVVDARSAAHFAETWASIVR
GAPAGDAPVPPCFDHKLLAARPARAVLYDHPEYKPEPAPAPAHAATASTYASAIITLTKQ
QVGALKAACAGASTFRAVVALVWQCACRARSLPPDKANLFLLYKYISEDWVDIQLNIQQR
DNCIYAPTLKANCCFTPTF

Transcript Sequence

Transcript ID

Os06t0185300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:4286708:4287890:1 gene:Os06g0185300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PUTRESCINE HYDROXYCINNAMOYL TRANSFERASE 2 description:Transferase family protein. (Os06t0185300-01)
Sequence

ACCAAAAAAACGTAGCGCGCGGCACACGGATCAACGTGAACGTGAACGAGACCGAGACCT
CGCCGCCGGCGACCAAAAATTTGTACTAACTGTGATGGCCACGGTGGAGGTGTTGACGTC
GGAGGTGGTCGCCCCGGCGGAGGAGACGCCGGCGGGCGCCGTGTGGCTGTCCAACCTCGA
CCTCGCCGCGCGGCGCGGGTACACGCCGACGGTGTACTTCTACCGGCGGAACGGCGACGA
CGAGGCGGCGTTCTTCGCGGCGGACGCCGTGAGGGACGGCCTCGCCAGGGCTCTGGTGCC
GTTCTACCCGCTCGCCGGCCGGCTCGGGCTCGCCGGCGGCGGCGAAGACGGGCGCGTCCA
GATCGACTGCACCGGCGAGGGCGCGGTGTTCGTCACGGCGAGGTCCGGGCACTACGCGCT
GGACGACCTGATGAACGAGTTCGTGCCGTGCGACGAGATGCGCGACCTGTTCGTGCCCCC
GACGCCGCCGCCGAACCCGCCGTGCGCGCTGCTGCTGGTGCAGGTCACGCACCTGCGGTG
CGGCGGCGTCGTGCTCGGCATGGCGCTGCACCACTCGGTGGTGGACGCGAGGAGCGCGGC
GCACTTCGCGGAGACGTGGGCGAGCATCGTGCGCGGCGCGCCCGCCGGGGACGCGCCCGT
GCCGCCGTGCTTCGACCACAAGCTGCTCGCCGCGCGGCCGGCCCGCGCGGTGCTGTACGA
CCACCCGGAGTACAAGCCCGAGCCGGCGCCGGCGCCGGCGCACGCCGCCACGGCGTCCAC
GTACGCGAGCGCCATCATCACGCTGACGAAGCAGCAGGTGGGCGCGCTGAAGGCGGCGTG
CGCGGGGGCGTCCACGTTCCGCGCGGTGGTGGCGCTGGTGTGGCAGTGCGCGTGCCGCGC
GCGTTCGCTGCCGCCGGACAAGGCAAACCTATTCCTTCTCTATAAGTACATCTCCGAAGA
TTGGGTCGACATACAACTTAATATTCAACAAAGGGATAATTGCATCTATGCCCCTACTTT
GAAAGCCAATTGCTGTTTTACCCCCACTTTTTAGGGTTTGCAGTTTTACCCCTATTTTTT
GAATCTGAACCAGCCGTCTACCCTCACTTGTGACAGCCGTTTGGTAGGTCCCACGTTTTA
TGTTAAAGAAATACAAAAGAAAATAAAGAAAAGGTTTTAGGGT