Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0183900-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:4189161:4190563:-1 gene:Os06g0183900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF602 family protein. (Os06t0183900-01)
Sequence

ATGGAGAAGCGCGCGACCACCACCAGGGCGGTGGTGCTCCGCCTCGACGACCTCTCCCTT
CCGCCGCGCCGCCTCACCGTGCCGTCCCGCCTCCCGGTCTCCCACCTCCTCCGCGCGCTG
CCGCAGCCGCTGCTCGAGTCGTCGTCGTTCTACCTCACCGCCGATGGCCGCCCGCTCCTG
CTGTCCGCGCCCGTGGCGTCGCTTCCGCCGTCGGGTTCGGTCCAGCTCCGCCTCCGCGCG
CTCCGCGGCGGTGGCGGCGACGGCGGCGCCACGGGCGCCGAGTCCCGCGACTGCTACCTC
TCCATGTACCTCGCGAAGAAGCCCGACAAGGCCGACCCCAACGAGGCGCGGCTCTCCCGC
TTCACCTGCTGCGCGCTCTCCGGCGAGCCGCTTGCCGCGCCCGCCGTCGCCGATCGCCTG
GGTAACCTCTTCAACAAGGAGGCCCTCGTCGAGGCGCTCCTCCACAAGCGCCTCCCCAAG
GCGCTCTCACACATCAGGGGTCTCAAGGACATGATCCCCATCCACCTGCATCCTAAGCCT
GATGCCGATGCGGCTGGTGAGGAGGTCCGGTTCCAGTGCCCGGTCACCGGGCTCGATTTC
AATGGGAAGTACCAATTCCTCGCGCTTCGCAAGTGTGGCCATGTGCTCAGCGTGAAGGCT
CTCAAGGAGGTGAAGACCTCGGCGTGCTTGGTATGCCATAAGGAGTTTGATGAGGCGGAC
AAGATGCCGCTCAACGGAACTGAGGACGAGGTTGCGGCATTGAGGCTGAGGATGGAGGAG
GAGAGGGGGAAGGTGAAGGAAAAGAAGGAGAAGAAGGTGGGAAATGGGCTAAGTGGGAGT
AAGCATGCTGCCGCTGCCGTGATGGCAGGGGGTGCTGAGAAGCTTGAAAATGGGAAGAAG
GGGGAGGCTCCCTCTTTGAAGCGGTTCAAGGCTGGAGACCATGCACCAGCATATGCAAAC
AAAGAAGTGTATGCATCGATTTTTACTTCTTCCAAGAAGTCAGATTTCAAGGAGACATAC
TCATGCCGGTCACTTCCCCTTGGAAGGAACTGA

Peptide Sequence

PEP ID

Os06t0183900-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:4189161:4190563:-1 gene:Os06g0183900 transcript:Os06t0183900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF602 family protein. (Os06t0183900-01)
Sequence

MEKRATTTRAVVLRLDDLSLPPRRLTVPSRLPVSHLLRALPQPLLESSSFYLTADGRPLL
LSAPVASLPPSGSVQLRLRALRGGGGDGGATGAESRDCYLSMYLAKKPDKADPNEARLSR
FTCCALSGEPLAAPAVADRLGNLFNKEALVEALLHKRLPKALSHIRGLKDMIPIHLHPKP
DADAAGEEVRFQCPVTGLDFNGKYQFLALRKCGHVLSVKALKEVKTSACLVCHKEFDEAD
KMPLNGTEDEVAALRLRMEEERGKVKEKKEKKVGNGLSGSKHAAAAVMAGGAEKLENGKK
GEAPSLKRFKAGDHAPAYANKEVYASIFTSSKKSDFKETYSCRSLPLGRN

Transcript Sequence

Transcript ID

Os06t0183900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:4189161:4190563:-1 gene:Os06g0183900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF602 family protein. (Os06t0183900-01)
Sequence

CTCTCTCTCTTTCTCGTCTCCTCCTATCCGCGTCCATCTCTCTCCCCGTCTCGATTCCCC
ACCAGCGGCGAAACCCTAACCCTAGAGCGGCCACCGCCATGGAGAAGCGCGCGACCACCA
CCAGGGCGGTGGTGCTCCGCCTCGACGACCTCTCCCTTCCGCCGCGCCGCCTCACCGTGC
CGTCCCGCCTCCCGGTCTCCCACCTCCTCCGCGCGCTGCCGCAGCCGCTGCTCGAGTCGT
CGTCGTTCTACCTCACCGCCGATGGCCGCCCGCTCCTGCTGTCCGCGCCCGTGGCGTCGC
TTCCGCCGTCGGGTTCGGTCCAGCTCCGCCTCCGCGCGCTCCGCGGCGGTGGCGGCGACG
GCGGCGCCACGGGCGCCGAGTCCCGCGACTGCTACCTCTCCATGTACCTCGCGAAGAAGC
CCGACAAGGCCGACCCCAACGAGGCGCGGCTCTCCCGCTTCACCTGCTGCGCGCTCTCCG
GCGAGCCGCTTGCCGCGCCCGCCGTCGCCGATCGCCTGGGTAACCTCTTCAACAAGGAGG
CCCTCGTCGAGGCGCTCCTCCACAAGCGCCTCCCCAAGGCGCTCTCACACATCAGGGGTC
TCAAGGACATGATCCCCATCCACCTGCATCCTAAGCCTGATGCCGATGCGGCTGGTGAGG
AGGTCCGGTTCCAGTGCCCGGTCACCGGGCTCGATTTCAATGGGAAGTACCAATTCCTCG
CGCTTCGCAAGTGTGGCCATGTGCTCAGCGTGAAGGCTCTCAAGGAGGTGAAGACCTCGG
CGTGCTTGGTATGCCATAAGGAGTTTGATGAGGCGGACAAGATGCCGCTCAACGGAACTG
AGGACGAGGTTGCGGCATTGAGGCTGAGGATGGAGGAGGAGAGGGGGAAGGTGAAGGAAA
AGAAGGAGAAGAAGGTGGGAAATGGGCTAAGTGGGAGTAAGCATGCTGCCGCTGCCGTGA
TGGCAGGGGGTGCTGAGAAGCTTGAAAATGGGAAGAAGGGGGAGGCTCCCTCTTTGAAGC
GGTTCAAGGCTGGAGACCATGCACCAGCATATGCAAACAAAGAAGTGTATGCATCGATTT
TTACTTCTTCCAAGAAGTCAGATTTCAAGGAGACATACTCATGCCGGTCACTTCCCCTTG
GAAGGAACTGAAGCGATCTTCTATTGAGAGATGGTAATGGCTTGGAGGTGAACATCCTGC
ACTGATTTGCTTCATAGCATGGTTCACCTGCAAGTTTCTTCATTGTAATTTTAGTTGTCG
GTGTTCTTCATGCTTTGATTACTGATGTGGGGCTCTGTGTTTCCATTGTCAAGGAAGCAA
AGTGTCGGAGTATTTGAAAGATGTGTGAAATATGTAATAGTTTGATACCATTAACAAGCA
ATACCAGCTCTGAAATCTTCTGT