Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0182500-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:4093312:4100863:1 gene:Os06g0182500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, LIM-type domain containing protein. (Os06t0182500-01);Zinc finger, LIM-type domain containing protein. (Os06t0182500-02)
Sequence	ATGGGTTGGTTGACCAAATTTTTTAGAGGTTCAACCCACAAAATCTCGGAAGGGCAATAC CACAGCAAACCCGCGGAGGAGACGATATGGAATGGACCCTCTAATTCCGCAGTTGTGACG GATGTCCCGTCAGAATTTGACAATGAAGATATCGCTCGTGCTATATCACTCTCTCTATTA GAGGAGGAACAAAGAAAGGCAAAGGCAATAGAAAAGGACATGCATTTGGAGGAGGATGAA CAACTTGCAAGAGCTATCCAGGAAAGTTTGAATGTTGAATCGCCTCCTCGTGCTCGTGAA AATGGCAACGCCAATGGTGGCAATATGTATCAACCACTGCCATTTATGTTTTCTTCTGGA TTCAGGACTTGTGCCGGATGTCACAGTGAGATTGGTCATGGGCGTTTCCTTAGTTGCATG GGAGCTGTTTGGCATCCAGAATGTTTTCGCTGTCATGCTTGTAATCAACCAATATATGAC TATGAGTTCTCCATGTCGGGAAACCATCCATACCATAAAACATGCTACAAGGAGCGCTTT CACCCAAAATGTGATGTCTGCAAGCAATTTATTCCTACAAATATGAATGGCCTGATTGAA TATAGAGCACATCCTTTCTGGTTACAAAAATACTGTCCATCACATGAGGTGGACGGTACT CCAAGATGCTGTAGTTGTGAAAGAATGGAGCCAAGGGAATCAAGATATGTATTGCTGGAC GATGGTCGCAAACTCTGCCTGGAGTGCCTTGATTCTGCAGTTATGGATACGAGCGAGTGC CAACCTCTTTATCTTGAAATACAGGAATTTTATGAAGGCCTAAATATGAAAGTGGAACAA CAAGTTCCCTTGCTTCTTGTAGAAAGACAGGCTTTAAATGAAGCCATGGAAGGAGAGAAG ACTGGTCACCACCATCTTCCAGAAACAAGAGGTTTATGCTTATCAGAAGAGCAAACTGTC AGCACGATATTGAGGAGACCAAGAATGGCTGGAAATAAAGTTATGGAAATGATAACGGAG CCATATAGGTTGACTCGTCGATGTGAAGTGACTGCAATTCTCATTCTTTATGGTCTCCCA AGATTGTTGACAGGTTCAATTTTAGCTCATGAGATGATGCATGCGTGGTTGCGACTTAAA GGATATCGCACACTTAGTCCAGACGTAGAAGAGGGCATATGCCAAGTTCTTGCTCACATG TGGATTGAGTCAGAGATCATTGCAGGATCAGGCAGTAATGGTGCTTCAACGTCTTCATCC TCATCAGCATCCACATCATCGAAAAAGGGGGGAAGATCTCAGTTTGAGCGAAAGCTTGGT GATTTTTTCAAGCACCAAATTGAGTCAGATACCTCAATGGCCTATGGCGATGGTTTTAGA GCTGGCAACCGAGCTGTTCTTCAGTATGGTCTAAAGCGCACCCTTGAGCATATCCGGTTA ACAGGGACTTTCCCATTTTGA

Peptide Sequence

PEP ID	Os06t0182500-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:4093312:4100863:1 gene:Os06g0182500 transcript:Os06t0182500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, LIM-type domain containing protein. (Os06t0182500-01);Zinc finger, LIM-type domain containing protein. (Os06t0182500-02)
Sequence	MGWLTKFFRGSTHKISEGQYHSKPAEETIWNGPSNSAVVTDVPSEFDNEDIARAISLSLL EEEQRKAKAIEKDMHLEEDEQLARAIQESLNVESPPRARENGNANGGNMYQPLPFMFSSG FRTCAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERF HPKCDVCKQFIPTNMNGLIEYRAHPFWLQKYCPSHEVDGTPRCCSCERMEPRESRYVLLD DGRKLCLECLDSAVMDTSECQPLYLEIQEFYEGLNMKVEQQVPLLLVERQALNEAMEGEK TGHHHLPETRGLCLSEEQTVSTILRRPRMAGNKVMEMITEPYRLTRRCEVTAILILYGLP RLLTGSILAHEMMHAWLRLKGYRTLSPDVEEGICQVLAHMWIESEIIAGSGSNGASTSSS SSASTSSKKGGRSQFERKLGDFFKHQIESDTSMAYGDGFRAGNRAVLQYGLKRTLEHIRL TGTFPF

Transcript Sequence

Transcript ID	Os06t0182500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:4093312:4100863:1 gene:Os06g0182500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, LIM-type domain containing protein. (Os06t0182500-01);Zinc finger, LIM-type domain containing protein. (Os06t0182500-02)
Sequence	GCACAACCCCACCCCGAATCCACCACCCCACGCCAAGCCCGCTCGCCGCCGCCGCCCGAG CGCGCGCGCGTACGGGCACGGCGGGCGTACGACGCCGGAGGTGGGGATCGAGCGTGCCCC CTCCTCCGTCGCGGCGGGCGACGTCGGACGTCGTCGGTCGTAGCTTGCCTTCGTTTCGTT GTCGGGTTTTCGGTGCTGCTGCTGCTGCTGGTGGTGGTCGAGCAAAGGCCGGTGGCGGAT CGCCGGCGGTCCCGTCCGCGGGAGGGGCGCGGGTGACGCGGTGATCAGGTGATCGGAGCC CCACCCTTCGTTTTCTCCGCGCAATTTTAGCACCGACGCGGGTGGTGGTGGTGGTGGTGG TGGTGGGCATTGGCATTTCGTCCCCTTCCCCACGATAGAGACGCGGAGCGTGTGCCCCCC CTCTCGATCTTGCCGCCGCTCGTAATCCCCGCCTGATGCCGGAGAACCTGCATTTTTTTT TGAGCCATTCCAGGCTTACGTTCTAATGCGACGCTGCTAGCGATAGAAAACCCAGTGGGG GGTCTGTGAGAATCATCGCTTGATCTCCGATCTATCCTGTTAACCATTCCTGTGAGGTTA GGAGGTTTCTGGTTTAGGGGCCTGAGTGAGGAGGAGGGTACTCAAACGGCTGGACCTGCA ATCGATCTGCTAACTTGGCTAACTTTGATAAAAGTGTCCCTTCCAACATTGCCATTTGGA GCTCTATGGGTTGGTTGACCAAATTTTTTAGAGGTTCAACCCACAAAATCTCGGAAGGGC AATACCACAGCAAACCCGCGGAGGAGACGATATGGAATGGACCCTCTAATTCCGCAGTTG TGACGGATGTCCCGTCAGAATTTGACAATGAAGATATCGCTCGTGCTATATCACTCTCTC TATTAGAGGAGGAACAAAGAAAGGCAAAGGCAATAGAAAAGGACATGCATTTGGAGGAGG ATGAACAACTTGCAAGAGCTATCCAGGAAAGTTTGAATGTTGAATCGCCTCCTCGTGCTC GTGAAAATGGCAACGCCAATGGTGGCAATATGTATCAACCACTGCCATTTATGTTTTCTT CTGGATTCAGGACTTGTGCCGGATGTCACAGTGAGATTGGTCATGGGCGTTTCCTTAGTT GCATGGGAGCTGTTTGGCATCCAGAATGTTTTCGCTGTCATGCTTGTAATCAACCAATAT ATGACTATGAGTTCTCCATGTCGGGAAACCATCCATACCATAAAACATGCTACAAGGAGC GCTTTCACCCAAAATGTGATGTCTGCAAGCAATTTATTCCTACAAATATGAATGGCCTGA TTGAATATAGAGCACATCCTTTCTGGTTACAAAAATACTGTCCATCACATGAGGTGGACG GTACTCCAAGATGCTGTAGTTGTGAAAGAATGGAGCCAAGGGAATCAAGATATGTATTGC TGGACGATGGTCGCAAACTCTGCCTGGAGTGCCTTGATTCTGCAGTTATGGATACGAGCG AGTGCCAACCTCTTTATCTTGAAATACAGGAATTTTATGAAGGCCTAAATATGAAAGTGG AACAACAAGTTCCCTTGCTTCTTGTAGAAAGACAGGCTTTAAATGAAGCCATGGAAGGAG AGAAGACTGGTCACCACCATCTTCCAGAAACAAGAGGTTTATGCTTATCAGAAGAGCAAA CTGTCAGCACGATATTGAGGAGACCAAGAATGGCTGGAAATAAAGTTATGGAAATGATAA CGGAGCCATATAGGTTGACTCGTCGATGTGAAGTGACTGCAATTCTCATTCTTTATGGTC TCCCAAGATTGTTGACAGGTTCAATTTTAGCTCATGAGATGATGCATGCGTGGTTGCGAC TTAAAGGATATCGCACACTTAGTCCAGACGTAGAAGAGGGCATATGCCAAGTTCTTGCTC ACATGTGGATTGAGTCAGAGATCATTGCAGGATCAGGCAGTAATGGTGCTTCAACGTCTT CATCCTCATCAGCATCCACATCATCGAAAAAGGGGGGAAGATCTCAGTTTGAGCGAAAGC TTGGTGATTTTTTCAAGCACCAAATTGAGTCAGATACCTCAATGGCCTATGGCGATGGTT TTAGAGCTGGCAACCGAGCTGTTCTTCAGTATGGTCTAAAGCGCACCCTTGAGCATATCC GGTTAACAGGGACTTTCCCATTTTGAAATTTCATAGATTCGTCTTTTGATGGAAGTTATA CACGATCGATTTGTCATTAAGCGTCCATTTACAGGAAAAGAAAGCAATTTTGAGATGTGC AATTGTACAAACAATCTTTTCAGTTACTTTTGGAAGGGCTAACTGACGACATTGATTAAA TTGTGATATGGTTAGCCCAACCAATCACACATGTATGGCATTCAGAAATTCTAATGGAAA CAGCGGTATTTTTTATGTGAC