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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0181700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:4040784:4041763:1 gene:Os06g0181700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 2 description:Pathogenesis-related transcriptional factor and ERF domain containing protein. (Os06t0181700-01)
Sequence

ATGGCGCGGCCGCAGCAGCGGTATCGCGGCGTGCGGCAGCGCCACTGGGGCTCATGGGTC
TCCGAGATCCGCCACCCTCTCCTGAAGACGAGGATCTGGCTGGGCACGTTCGAGACGGCG
GAGGACGCGGCACGCGCGTACGACGAGGCGGCGCGGATCATGTGCGGCCCGCGCGTGCGC
ACCAACTTCCCCCACGACGTCGCCGACGAGGCCGCGCCGCCGCCGCCGCCGCACAGCGCC
GCCGCAGCCTCCTCGTCGTTCCTCTCCGCGGCGCTCGTCGCCAAGCTCCACCGCTTCAAC
CTCGCCTCCGTCCAGGCTGCGCAGCGCGGCAACAGCAACGACGACGACTCCACCACCTCC
TCCTCCGCCGCCGCGTCGTCGCGCGCCGTGATTCCGTCCCTTCCCGCCGCCGCCGGCGCA
TTGGGCAATGCGGCGGCGACGGCGGAGTGGAGCGGCGGGTTCCTCGAGGAGCAGTACGTG
GACCAGATGATCGAGGAGCTCCTCGACTCCAACTTCTCCATGGAGATCTCCTGCTGA

Peptide Sequence

PEP ID

Os06t0181700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:4040784:4041763:1 gene:Os06g0181700 transcript:Os06t0181700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 2 description:Pathogenesis-related transcriptional factor and ERF domain containing protein. (Os06t0181700-01)
Sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCGPRVR
TNFPHDVADEAAPPPPPHSAAAASSSFLSAALVAKLHRFNLASVQAAQRGNSNDDDSTTS
SSAAASSRAVIPSLPAAAGALGNAAATAEWSGGFLEEQYVDQMIEELLDSNFSMEISC

Transcript Sequence

Transcript ID

Os06t0181700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:4040784:4041763:1 gene:Os06g0181700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 2 description:Pathogenesis-related transcriptional factor and ERF domain containing protein. (Os06t0181700-01)
Sequence

ACTGATCACCTCGACCTCACTTCCTCCTCAACCTCGAGCTCACTCCTCGCTCTCCCGCCG
CGAGCGCGCGCTCTCTCTCGCCGCGACCACGCGCAATCCGTCGCCGAGCTCGAGGACGTC
GGCAATGGCGCGGCCGCAGCAGCGGTATCGCGGCGTGCGGCAGCGCCACTGGGGCTCATG
GGTCTCCGAGATCCGCCACCCTCTCCTGAAGACGAGGATCTGGCTGGGCACGTTCGAGAC
GGCGGAGGACGCGGCACGCGCGTACGACGAGGCGGCGCGGATCATGTGCGGCCCGCGCGT
GCGCACCAACTTCCCCCACGACGTCGCCGACGAGGCCGCGCCGCCGCCGCCGCCGCACAG
CGCCGCCGCAGCCTCCTCGTCGTTCCTCTCCGCGGCGCTCGTCGCCAAGCTCCACCGCTT
CAACCTCGCCTCCGTCCAGGCTGCGCAGCGCGGCAACAGCAACGACGACGACTCCACCAC
CTCCTCCTCCGCCGCCGCGTCGTCGCGCGCCGTGATTCCGTCCCTTCCCGCCGCCGCCGG
CGCATTGGGCAATGCGGCGGCGACGGCGGAGTGGAGCGGCGGGTTCCTCGAGGAGCAGTA
CGTGGACCAGATGATCGAGGAGCTCCTCGACTCCAACTTCTCCATGGAGATCTCCTGCTG
ATGTGCCCTGTTCATCTACCTGTTCTTCTCTGCTCCATCTCCTGTTTCTTTCTCTCTCTC
TTTTTTTTCTTTCTTTTTTTTTGTTTTTTTAGTTTAGTAAGCTATGTGAGGAAGAACTCT
GATCGAGGTTAGTTTGGTCACAGTGAGTTCTGGAGCAGCTTGTGTATACGGTAGCATCAT
TTAGAGCATAATAGGGTTGCAGTTGAGACCTTC