Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0179700-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:3947927:3952217:-1 gene:Os06g0179700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C54, protein phosphatase 2C 54, protein phosphatase 84 description:Similar to DNA-binding protein phosphatase 2C. (Os06t0179700-01)
Sequence	ATGTGCGTGGAGGAGTCGGAGGGCGCGGAGAGGCTGGATTTTGGGGAGCCCGCCGCCGCC GCCGCCGACGCCGGGAAGAGCAAGAGCAAGAGCCCCGACGAACTCCCCTCGCCTCGGATG GAAAGAGTTTGTGAGAACACTACAGCTGCTGATTTCAAGCAAAATAAGTCTGGTAATTTT GTCCCAAATATTCGATCTGGGGATTGGTCGGATATTGGAGGTCGTCAATACATGGAAGAT ACCCATGTGTGTATTACTGACCTAGCTAAGAACTTTGGTTATCAATCGGTGGATAATGAA GCTATTTCCTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCTGCCCATTTTGTT CGTGATAATTTACCAAGGATCATTGTGGAAGATGCTGATTTTCCTCTTGAGCTTGAGAAA GTAGTAAGAAGATCCTTTGTTCATGCAGATAATCAGTTTGCAAAGACAACACTGTCTTCT GGCACAACAGCACTTACAGCAATGATTTTCGGAAGGACTCTTCTGATTGCAAATGCTGGA GATTGTAGGGCGGTTCTTTCACGGTGCGGCACTGCAATTGAAATGTCAGTGGACCACAGG CCTTGCAGCCTCAGCGAAAAACTGCGTGTAGAATCACTTGGTGGCTATGTCGACGATGGT TACCTCAACGGTTTGTTAGGAGTCACTAGAGCACTCGGTGACTGGCATCTTGAGGGCATG AAAGAAGCTGGCAATCCAGGAGGTCCACTTAGTGCTGAACCAGAGCTAAAGATGATCACA CTGACAAAGGACGACGAGTTCTTGATAATTGGCAGCGACGGGATCTGGGACGTCTTCTCA AACCAAAACGTGGTGGACTTTGCACGGAGGCGCCTCCAAGAACACAACGATGTGAAGTCC TGCTGCAGGGAGATCGTTGAGGAGGCAATAAAGCGAGGCGCCACCGACAACTTAACCGCG GTGTTGGTCTCCTTCCACCTGGAGGCTCCTCCCCAGGTCAGAGTGAGCCGACCCGGTAGG GTGGCGCGCAGCATTTCGGCTGAGGGGCTGAACAGCTTGAGGACACTCCTGAGAAACCAA TGA

Peptide Sequence

PEP ID	Os06t0179700-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:3947927:3952217:-1 gene:Os06g0179700 transcript:Os06t0179700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C54, protein phosphatase 2C 54, protein phosphatase 84 description:Similar to DNA-binding protein phosphatase 2C. (Os06t0179700-01)
Sequence	MCVEESEGAERLDFGEPAAAAADAGKSKSKSPDELPSPRMERVCENTTAADFKQNKSGNF VPNIRSGDWSDIGGRQYMEDTHVCITDLAKNFGYQSVDNEAISFYGVFDGHGGKDAAHFV RDNLPRIIVEDADFPLELEKVVRRSFVHADNQFAKTTLSSGTTALTAMIFGRTLLIANAG DCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGGYVDDGYLNGLLGVTRALGDWHLEGM KEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWDVFSNQNVVDFARRRLQEHNDVKS CCREIVEEAIKRGATDNLTAVLVSFHLEAPPQVRVSRPGRVARSISAEGLNSLRTLLRNQ

Transcript Sequence

Transcript ID	Os06t0179700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3947927:3952217:-1 gene:Os06g0179700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C54, protein phosphatase 2C 54, protein phosphatase 84 description:Similar to DNA-binding protein phosphatase 2C. (Os06t0179700-01)
Sequence	ACACACCCACCTCCATTTCCCTCCCATTTCTTTCCTTCTCCGCAGATATTCCCCAAGAAT CTCCTCCTCCTCCTCGGATTCCCCTCTCTCTCTCCTCCTACAGAGTAGTAGCTTGTGCTT GCTTTGCTCCGATTCTCTCTCTTCCCTGTCTCTCCTAGCTGCAATATACCACTAGCAGCA GGGCGCCCAGTTGCGCGATCGATCGATCGAGCTCCGTGGTGCCAAGAACGCCCTGTACGG CGCGCCGGTATGTGCGTGGAGGAGTCGGAGGGCGCGGAGAGGCTGGATTTTGGGGAGCCC GCCGCCGCCGCCGCCGACGCCGGGAAGAGCAAGAGCAAGAGCCCCGACGAACTCCCCTCG CCTCGGATGGAAAGAGTTTGTGAGAACACTACAGCTGCTGATTTCAAGCAAAATAAGTCT GGTAATTTTGTCCCAAATATTCGATCTGGGGATTGGTCGGATATTGGAGGTCGTCAATAC ATGGAAGATACCCATGTGTGTATTACTGACCTAGCTAAGAACTTTGGTTATCAATCGGTG GATAATGAAGCTATTTCCTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCTGCC CATTTTGTTCGTGATAATTTACCAAGGATCATTGTGGAAGATGCTGATTTTCCTCTTGAG CTTGAGAAAGTAGTAAGAAGATCCTTTGTTCATGCAGATAATCAGTTTGCAAAGACAACA CTGTCTTCTGGCACAACAGCACTTACAGCAATGATTTTCGGAAGGACTCTTCTGATTGCA AATGCTGGAGATTGTAGGGCGGTTCTTTCACGGTGCGGCACTGCAATTGAAATGTCAGTG GACCACAGGCCTTGCAGCCTCAGCGAAAAACTGCGTGTAGAATCACTTGGTGGCTATGTC GACGATGGTTACCTCAACGGTTTGTTAGGAGTCACTAGAGCACTCGGTGACTGGCATCTT GAGGGCATGAAAGAAGCTGGCAATCCAGGAGGTCCACTTAGTGCTGAACCAGAGCTAAAG ATGATCACACTGACAAAGGACGACGAGTTCTTGATAATTGGCAGCGACGGGATCTGGGAC GTCTTCTCAAACCAAAACGTGGTGGACTTTGCACGGAGGCGCCTCCAAGAACACAACGAT GTGAAGTCCTGCTGCAGGGAGATCGTTGAGGAGGCAATAAAGCGAGGCGCCACCGACAAC TTAACCGCGGTGTTGGTCTCCTTCCACCTGGAGGCTCCTCCCCAGGTCAGAGTGAGCCGA CCCGGTAGGGTGGCGCGCAGCATTTCGGCTGAGGGGCTGAACAGCTTGAGGACACTCCTG AGAAACCAATGATGGCCATCTTCTTTGCATTCTTGCTGCAATTTCTCTAGTATGTTGCAT TGCCGAGTGTTAATTGTATGTAGTGATCTCGGCACCTCATTGTTGTTAGATGTTACCACC ATTGTTGTGATGACACCAGCTATTATTCTTGTTGGTAATTAAGCCAACGAACATGAGTTC TGAGCTCTCAAATTGTGAGAAATTCTAAGCGGCTGTAACAAGTTGAGCTCTGTGAAGAAA GAAGTGAGTGCCCAAGCTCACAGTGTCATATTTTTCTCCTATTCTTGTCTGTAAATAAAA ATGTCAGCTACTCAGCTCCTGGGTAATTGAACGTTGACCATGTAAAAGATACCCCCATTG AGTGAAATTGCCGCCAATTGGCTCATCTTTTC