Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0179200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:3934027:3937229:-1 gene:Os06g0179200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nodulin-like protein. (Os06t0179200-01)
Sequence	ATGAGGGGGGCGGTGGCGGTGAAGGCGGGGAGCAGGCCGCCGTGGGTGGGGCTAGGGGCG GCGGTGTGGGTGCAGGTGGCGGGCGGAGCCAGCTCCACCTTCGCGCTCTACTCCCACGCC CTCAAGGTCGCGCTCGCCGCCGACCAGCGCCGCCTCGCGCTGCTCGGGGTCGCCTGCGAC GTCGGGGAGAACCTCGGCCTCCTCCCGGGCGTCCTCTGCAACCGCCTCCACCCCGCCCTG CTGCTCCTCGTCGGCGCCGCCGCATGCCTCCTCGGCTACGGCTCCACCTGGCTCGCCGTC TCCGCCTCCGGCCCCGCGCTCCCCTACTGGCTGATATGGTTTGCCTTATGCCTTGCTGCA AACAGTGGTGCATGGTTGGGGACCGCTGTTTTGGTAACCAATATGAGGAATTTCCCACTC AGTAGAGGTGCCGTCGCTGGCATCCTTAAAGGGTACGCTGGTTTAAGTGCTGCTGTGTAC ACTGTAATATACACCGGAGTACTTCATGATTCAGCTTCAAACTTTCTGCTTTTTGTCACC CTGGGAGTTCCTGTTGTGTGCCTTGTGACAATGTACTTCGTGCGGCCTTGTGAACCCTCC CTTGTGGAGAACTCTTCGGAGCAAGTGCATTTTCTGTTCACACAACTCTCCAGTGTTCTT CTAGGGGTTTATCTTGTTGCAGCCACGATATTGGACCATTTCGTAACTCTTACTGATGCT GTGAACTATGTTCTGCTTGTCATCATGGTCCTTGTCCTCTTTGTTCCACTTACAGTACCC TTGAAAATGACATTGTTTCCAAGCAACCGAAGAAAAGGGCAATCCGATTCATCAGAGTGC TCTTCTTCTTCTGCTGATCATGATCATACAGAATCATTACTTCCTTCTTCATCAGCATCA AATCTTGGTAATATAGAAGATGATGATTCCATGGATATTGATATTCTCTTAGCTGAGGGA GAAGGGGCTATAAAGCAGAAGAGAAGAAGACCAAAAAGGGGAGAGGACTTTAGATTTCGT GAAGCACTGCTGAAGGCTGATTTCTGGCTTTTATTTGCAGTGTATTTTATTGGGGTTGGA TCTGGAGTCACTGTTCTTAATAATCTAGCACAAGTTGGAATTGCAGCAGGTGTTGCGGAT ACAACCATATCACTCGCCCTCTTCAGTTTCGGCAATTTCTTTGGCCGTTTAGGAGGTGGT GCTGTTTCTGAGTATCTTGTCAGGTCAAGGACCCTTCCACGGACAACATTGATTACATGC ACCCAAGTCATGATGATAATTATATACCTGCTCTTTGCATTGGGCCACCATGCCACACTT CATGTCTCTGTTGCTTTACTTGGTATTTGTTATGGTGCCCAGTTCTCAGTGATGGTGTCA ACTTCATCTGAGTTGTTTGGATTGAAGCACTTCGGAAAGATTTTCAATTTCATCTCCTTG GGGAACCCACTTGGCGCACTCTTGTTTAACAGTCTCGCGGGGTATGTTTACGACCAGGAA GTGGAGAGACAGCATGCCACAACAATGGACACTGACATTGCATGCCATGGCCCTAATTGT TTCAGACTTACATTTTGCGTTCTAGCTGGAGTGGCTAGCTTGGGTACATTGCTGAGCATT GTTTTGACAGTGAGAATCCGACCAGTATATCAGATGCTCTATGCTGGTGGATCCTTCAGC CAGCCGAGGAGCTCTGCTCACTGA

Peptide Sequence

PEP ID	Os06t0179200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:3934027:3937229:-1 gene:Os06g0179200 transcript:Os06t0179200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nodulin-like protein. (Os06t0179200-01)
Sequence	MRGAVAVKAGSRPPWVGLGAAVWVQVAGGASSTFALYSHALKVALAADQRRLALLGVACD VGENLGLLPGVLCNRLHPALLLLVGAAACLLGYGSTWLAVSASGPALPYWLIWFALCLAA NSGAWLGTAVLVTNMRNFPLSRGAVAGILKGYAGLSAAVYTVIYTGVLHDSASNFLLFVT LGVPVVCLVTMYFVRPCEPSLVENSSEQVHFLFTQLSSVLLGVYLVAATILDHFVTLTDA VNYVLLVIMVLVLFVPLTVPLKMTLFPSNRRKGQSDSSECSSSSADHDHTESLLPSSSAS NLGNIEDDDSMDIDILLAEGEGAIKQKRRRPKRGEDFRFREALLKADFWLLFAVYFIGVG SGVTVLNNLAQVGIAAGVADTTISLALFSFGNFFGRLGGGAVSEYLVRSRTLPRTTLITC TQVMMIIIYLLFALGHHATLHVSVALLGICYGAQFSVMVSTSSELFGLKHFGKIFNFISL GNPLGALLFNSLAGYVYDQEVERQHATTMDTDIACHGPNCFRLTFCVLAGVASLGTLLSI VLTVRIRPVYQMLYAGGSFSQPRSSAH

Transcript Sequence

Transcript ID	Os06t0179200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3934027:3937229:-1 gene:Os06g0179200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nodulin-like protein. (Os06t0179200-01)
Sequence	GCTCTCGCTCCCACCACGCTTCGCTGCTGCTGATCAAACCCCGCTTCTCGATCCGACCAG GGAAGGAGGAGGGGAGGATGAGGGGGGCGGTGGCGGTGAAGGCGGGGAGCAGGCCGCCGT GGGTGGGGCTAGGGGCGGCGGTGTGGGTGCAGGTGGCGGGCGGAGCCAGCTCCACCTTCG CGCTCTACTCCCACGCCCTCAAGGTCGCGCTCGCCGCCGACCAGCGCCGCCTCGCGCTGC TCGGGGTCGCCTGCGACGTCGGGGAGAACCTCGGCCTCCTCCCGGGCGTCCTCTGCAACC GCCTCCACCCCGCCCTGCTGCTCCTCGTCGGCGCCGCCGCATGCCTCCTCGGCTACGGCT CCACCTGGCTCGCCGTCTCCGCCTCCGGCCCCGCGCTCCCCTACTGGCTGATATGGTTTG CCTTATGCCTTGCTGCAAACAGTGGTGCATGGTTGGGGACCGCTGTTTTGGTAACCAATA TGAGGAATTTCCCACTCAGTAGAGGTGCCGTCGCTGGCATCCTTAAAGGGTACGCTGGTT TAAGTGCTGCTGTGTACACTGTAATATACACCGGAGTACTTCATGATTCAGCTTCAAACT TTCTGCTTTTTGTCACCCTGGGAGTTCCTGTTGTGTGCCTTGTGACAATGTACTTCGTGC GGCCTTGTGAACCCTCCCTTGTGGAGAACTCTTCGGAGCAAGTGCATTTTCTGTTCACAC AACTCTCCAGTGTTCTTCTAGGGGTTTATCTTGTTGCAGCCACGATATTGGACCATTTCG TAACTCTTACTGATGCTGTGAACTATGTTCTGCTTGTCATCATGGTCCTTGTCCTCTTTG TTCCACTTACAGTACCCTTGAAAATGACATTGTTTCCAAGCAACCGAAGAAAAGGGCAAT CCGATTCATCAGAGTGCTCTTCTTCTTCTGCTGATCATGATCATACAGAATCATTACTTC CTTCTTCATCAGCATCAAATCTTGGTAATATAGAAGATGATGATTCCATGGATATTGATA TTCTCTTAGCTGAGGGAGAAGGGGCTATAAAGCAGAAGAGAAGAAGACCAAAAAGGGGAG AGGACTTTAGATTTCGTGAAGCACTGCTGAAGGCTGATTTCTGGCTTTTATTTGCAGTGT ATTTTATTGGGGTTGGATCTGGAGTCACTGTTCTTAATAATCTAGCACAAGTTGGAATTG CAGCAGGTGTTGCGGATACAACCATATCACTCGCCCTCTTCAGTTTCGGCAATTTCTTTG GCCGTTTAGGAGGTGGTGCTGTTTCTGAGTATCTTGTCAGGTCAAGGACCCTTCCACGGA CAACATTGATTACATGCACCCAAGTCATGATGATAATTATATACCTGCTCTTTGCATTGG GCCACCATGCCACACTTCATGTCTCTGTTGCTTTACTTGGTATTTGTTATGGTGCCCAGT TCTCAGTGATGGTGTCAACTTCATCTGAGTTGTTTGGATTGAAGCACTTCGGAAAGATTT TCAATTTCATCTCCTTGGGGAACCCACTTGGCGCACTCTTGTTTAACAGTCTCGCGGGGT ATGTTTACGACCAGGAAGTGGAGAGACAGCATGCCACAACAATGGACACTGACATTGCAT GCCATGGCCCTAATTGTTTCAGACTTACATTTTGCGTTCTAGCTGGAGTGGCTAGCTTGG GTACATTGCTGAGCATTGTTTTGACAGTGAGAATCCGACCAGTATATCAGATGCTCTATG CTGGTGGATCCTTCAGCCAGCCGAGGAGCTCTGCTCACTGAGAAAGGCTTTTCCGGAATT CACATTGATGTAGCATGAGATCGAGATCTTGTTTGATGATATTCTTGGATCCACTGTATT CAGTTATGAGTATTGGTGCTCTACACTGTTATTTCAGCTATGAGGTTCAGGAATGAGAGA GGTGCTTTTTGTTGAGTTTGTAATGCGATGCTGGTGCTGCTAGTATTAGGCTGATGAGCT AAAGCAAGAAAACGAGAATGTAATAACAGAAATTGCTGCTTTTGTATAATAGAAATTTAT GATTATACTTAGGCACACAAGCTGTGTGATATTCAGGTGTTCTCATGTTCTGATAAAGAA AATATTTCATGCATTGAGCATCTC