Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0178900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:3919532:3924302:1 gene:Os06g0178900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar H+-pyrophosphatase 2, V-PPase 2, class II V-PPase description:Vacuolar H+-pyrophosphatase (EC 3.6.1.1) (Ovp2). (Os06t0178900-01)
Sequence	ATGGCGATCCTCTCGGCGCTCGGGACCGAGGTGTTCATCCCCGTCGCGGCCGCCGTCGGC GTCGCGTTCGCCGTCGCGCAGTGGCTGCTCGTCGCGCGGGTGAAGGTCAACCCGGCGCAC GCGGCGGCGGCCGCGGCGTCGGGGGGGAGCAAGAACGGCGGGTACGGGGACTACCTCATC GAGGAGGAGGAGGGGCTCAACGACCACAACGTCGTCGTCAAGTGCCACGAGATCCAGACC GCCATCTCCGAAGGAGCAACATCATTTCTCTTCACGGAGTACCAATATGTTGGTATCTTC ATGTCAATCTTCGCTGTCGTGATCTTCCTCTTCCTTGGTTCAGTCGAGGGATTCAGTACA AAGAGCCAGCCTTGCACATACAGCAAGGACAAGTACTGCAAGCCTGCCCTTTTCAACGCG CTCTTTAGCACTGCATCTTTCTTGCTGGGAGCGATCACCTCTTTGGTCTCTGGTTACCTT GGAATGAAGATCGCCACATTTGCCAATGCCAGAACTACCCTGGAAGCAAGGAAGGGTGTT GGGAAGGCATTTATCATTGCTTTCCGCTCTGGTGCTGTTATGGGCTTCTTGCTGGCATCA AGTGGTCTTGTGGTTCTTTACATCGCCATTAATGTATTTAAGTTGTATTATGGTGATGAC TGGGAAGGTCTTTTTGAGTCTATCACTGGTTATGGTCTTGGTGGATCTTCCATGGCTCTC TTCGGAAGGGTTGGTGGAGGTATTTACACTAAGGCTGCTGATGTGGGTGCTGATCTTGTT GGCAAGGTTGAGAGGAACATCCCTGAAGATGATCCCAGGAACCCAGCTGTGATTGCTGAC AATGTCGGTGACAATGTTGGTGATATTGCTGGAATGGGATCAGATCTCTTTGGGTCATAC GCCGAATCATCCTGTGCTGCTCTTGTTGTTGCATCTATCTCATCTTTTGGAATCAACCAT GATTTCACTGGGATGTGCTACCCACTGCTTGTCAGCTCTGTTGGCATCATTGTTTGTTTG ATCACCACACTCTTTGCAACTGATTTCTTTGAGATCAAGGCAGTGAAAGAAATTGAACCT GCTCTGAAGAAGCAGCTCATCATCTCCACTGCTTTGATGACTGTTGGTATTGCAATAATC AGCTGGTTGGCCCTTCCAGCAAAGTTCACCATCTTCAATTTTGGTGCTCAGAAGGAAGTT ACCAACTGGGGCTTGTTCTTCTGCGTTGCAATTGGTCTGTGGGCTGGTCTGATCATTGGT TTTGTGACAGAGTACTACACTAGCAATGCATACAGCCCTGTGCAAGATGTTGCAGATTCC TGCAGAACTGGTGCTGCCACTAATGTCATATTTGGTCTTGCTCTGGGATACAAATCAGTT ATCATCCCAATTTTTGCTATTGCTGTCAGCATATATGTTAGTTTCTCTATTGCTGCAATG TACGGCATAGCCGTTGCCGCTCTTGGCATGCTAAGCACCATTGCAACAGGCCTTGCCATT GATGCTTATGGTCCTATCAGTGACAATGCTGGTGGTATTGCCGAGATGGCTGGTATGAGC CACAGAATCCGTGAGAGAACTGATGCCCTTGATGCTGCTGGCAACACAACTGCTGCTATT GGGAAGGGTTTTGCCATTGGATCAGCTGCTCTGGTGTCCCTTGCACTTTTTGGTGCCTTC GTCAGCAGAGCTGGAGTGAAGGTTGTTGATGTCCTGTCTCCAAAGGTCTTCATCGGTTTG ATTGTTGGAGCCATGCTCCCGTACTGGTTCTCTGCCATGACCATGAAGAGTGTTGGAAGT GCCGCCCTCAAGATGGTTGAGGAGGTTCGGAGGCAATTCAACTCCATTCCTGGGCTAATG GAGGGAACTGGCAAGCCTGACTATGCCACCTGCGTCAAGATCTCCACTGATGCTTCCATC AAGGAGATGATTCCCCCTGGTGCTTTGGTGATGCTCACCCCCCTCATCGTCGGAACTCTC TTTGGTGTGGAGACCCTGTCTGGTGTTCTGGCTGGTGCTCTTGTTTCCGGAGTTCAGATC GCCATCTCGGCCTCCAACACTGGTGGCGCATGGGATAACGCAAAGAAGTACATTGAGGCT GGTGCCAGTGAGCATGCTCGGACCCTTGGTCCCAAGGGATCAGACTGCCACAAGGCCGCC GTGATCGGTGACACCATTGGAGACCCCCTCAAGGACACATCAGGCCCGTCGCTCAACATC CTCATCAAGCTCATGGCCGTCGAGTCCCTTGTGTTTGCGCCTTTCTTCGCCACACACGGT GGTCTGCTGTTCAAGTGGTTCTAA

Peptide Sequence

PEP ID	Os06t0178900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:3919532:3924302:1 gene:Os06g0178900 transcript:Os06t0178900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar H+-pyrophosphatase 2, V-PPase 2, class II V-PPase description:Vacuolar H+-pyrophosphatase (EC 3.6.1.1) (Ovp2). (Os06t0178900-01)
Sequence	MAILSALGTEVFIPVAAAVGVAFAVAQWLLVARVKVNPAHAAAAAASGGSKNGGYGDYLI EEEEGLNDHNVVVKCHEIQTAISEGATSFLFTEYQYVGIFMSIFAVVIFLFLGSVEGFST KSQPCTYSKDKYCKPALFNALFSTASFLLGAITSLVSGYLGMKIATFANARTTLEARKGV GKAFIIAFRSGAVMGFLLASSGLVVLYIAINVFKLYYGDDWEGLFESITGYGLGGSSMAL FGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSY AESSCAALVVASISSFGINHDFTGMCYPLLVSSVGIIVCLITTLFATDFFEIKAVKEIEP ALKKQLIISTALMTVGIAIISWLALPAKFTIFNFGAQKEVTNWGLFFCVAIGLWAGLIIG FVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIYVSFSIAAM YGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAI GKGFAIGSAALVSLALFGAFVSRAGVKVVDVLSPKVFIGLIVGAMLPYWFSAMTMKSVGS AALKMVEEVRRQFNSIPGLMEGTGKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTL FGVETLSGVLAGALVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAA VIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKWF

Transcript Sequence

Transcript ID	Os06t0178900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3919532:3924302:1 gene:Os06g0178900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar H+-pyrophosphatase 2, V-PPase 2, class II V-PPase description:Vacuolar H+-pyrophosphatase (EC 3.6.1.1) (Ovp2). (Os06t0178900-01)
Sequence	GAGTGTGCAGAGCGAGAGACGCGTCACCTCCTCCCCGCCGCCGCCGCCGCCGCCTCGCCT CCGTTGCAACCGTAGTAGGGTTAGGGTTTTCGTGGTGGGCGCCGCCGCCATGGCGATCCT CTCGGCGCTCGGGACCGAGGTGTTCATCCCCGTCGCGGCCGCCGTCGGCGTCGCGTTCGC CGTCGCGCAGTGGCTGCTCGTCGCGCGGGTGAAGGTCAACCCGGCGCACGCGGCGGCGGC CGCGGCGTCGGGGGGGAGCAAGAACGGCGGGTACGGGGACTACCTCATCGAGGAGGAGGA GGGGCTCAACGACCACAACGTCGTCGTCAAGTGCCACGAGATCCAGACCGCCATCTCCGA AGGAGCAACATCATTTCTCTTCACGGAGTACCAATATGTTGGTATCTTCATGTCAATCTT CGCTGTCGTGATCTTCCTCTTCCTTGGTTCAGTCGAGGGATTCAGTACAAAGAGCCAGCC TTGCACATACAGCAAGGACAAGTACTGCAAGCCTGCCCTTTTCAACGCGCTCTTTAGCAC TGCATCTTTCTTGCTGGGAGCGATCACCTCTTTGGTCTCTGGTTACCTTGGAATGAAGAT CGCCACATTTGCCAATGCCAGAACTACCCTGGAAGCAAGGAAGGGTGTTGGGAAGGCATT TATCATTGCTTTCCGCTCTGGTGCTGTTATGGGCTTCTTGCTGGCATCAAGTGGTCTTGT GGTTCTTTACATCGCCATTAATGTATTTAAGTTGTATTATGGTGATGACTGGGAAGGTCT TTTTGAGTCTATCACTGGTTATGGTCTTGGTGGATCTTCCATGGCTCTCTTCGGAAGGGT TGGTGGAGGTATTTACACTAAGGCTGCTGATGTGGGTGCTGATCTTGTTGGCAAGGTTGA GAGGAACATCCCTGAAGATGATCCCAGGAACCCAGCTGTGATTGCTGACAATGTCGGTGA CAATGTTGGTGATATTGCTGGAATGGGATCAGATCTCTTTGGGTCATACGCCGAATCATC CTGTGCTGCTCTTGTTGTTGCATCTATCTCATCTTTTGGAATCAACCATGATTTCACTGG GATGTGCTACCCACTGCTTGTCAGCTCTGTTGGCATCATTGTTTGTTTGATCACCACACT CTTTGCAACTGATTTCTTTGAGATCAAGGCAGTGAAAGAAATTGAACCTGCTCTGAAGAA GCAGCTCATCATCTCCACTGCTTTGATGACTGTTGGTATTGCAATAATCAGCTGGTTGGC CCTTCCAGCAAAGTTCACCATCTTCAATTTTGGTGCTCAGAAGGAAGTTACCAACTGGGG CTTGTTCTTCTGCGTTGCAATTGGTCTGTGGGCTGGTCTGATCATTGGTTTTGTGACAGA GTACTACACTAGCAATGCATACAGCCCTGTGCAAGATGTTGCAGATTCCTGCAGAACTGG TGCTGCCACTAATGTCATATTTGGTCTTGCTCTGGGATACAAATCAGTTATCATCCCAAT TTTTGCTATTGCTGTCAGCATATATGTTAGTTTCTCTATTGCTGCAATGTACGGCATAGC CGTTGCCGCTCTTGGCATGCTAAGCACCATTGCAACAGGCCTTGCCATTGATGCTTATGG TCCTATCAGTGACAATGCTGGTGGTATTGCCGAGATGGCTGGTATGAGCCACAGAATCCG TGAGAGAACTGATGCCCTTGATGCTGCTGGCAACACAACTGCTGCTATTGGGAAGGGTTT TGCCATTGGATCAGCTGCTCTGGTGTCCCTTGCACTTTTTGGTGCCTTCGTCAGCAGAGC TGGAGTGAAGGTTGTTGATGTCCTGTCTCCAAAGGTCTTCATCGGTTTGATTGTTGGAGC CATGCTCCCGTACTGGTTCTCTGCCATGACCATGAAGAGTGTTGGAAGTGCCGCCCTCAA GATGGTTGAGGAGGTTCGGAGGCAATTCAACTCCATTCCTGGGCTAATGGAGGGAACTGG CAAGCCTGACTATGCCACCTGCGTCAAGATCTCCACTGATGCTTCCATCAAGGAGATGAT TCCCCCTGGTGCTTTGGTGATGCTCACCCCCCTCATCGTCGGAACTCTCTTTGGTGTGGA GACCCTGTCTGGTGTTCTGGCTGGTGCTCTTGTTTCCGGAGTTCAGATCGCCATCTCGGC CTCCAACACTGGTGGCGCATGGGATAACGCAAAGAAGTACATTGAGGCTGGTGCCAGTGA GCATGCTCGGACCCTTGGTCCCAAGGGATCAGACTGCCACAAGGCCGCCGTGATCGGTGA CACCATTGGAGACCCCCTCAAGGACACATCAGGCCCGTCGCTCAACATCCTCATCAAGCT CATGGCCGTCGAGTCCCTTGTGTTTGCGCCTTTCTTCGCCACACACGGTGGTCTGCTGTT CAAGTGGTTCTAAGAACATAATACCATTGGCAGCAGCGCTGAAATCTTCGACGGACATCA CGAATAACGACTGCCAGTGTACGTTGTGCTTGGGAATCGCCCGCACCGTTTCTTTTTGGG TCTCATGTTGTTTCAGGATTGCTGTTGTCTTATCTTTGGCCTCTTGGGAGTTGTTACCTT AGCCTTACTGTTAGCTTCACTTAGAAGAGACCAGAGTCCAGATGTTCTCCCATCTCTGGT GCGTGTCTGGCAAATTTTCCTCGTCCCATGATGACGACGATAATGTTTGAACTCTTGAAC AATGAGATGATGATTGTTGCATGTTAGTTACTGGTGGT