Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0178700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:3900488:3903056:1 gene:Os06g0178700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Iron/ascorbate-dependent oxidoreductase. (Os06t0178700-01)
Sequence

ATGGCTGACGAGCCATGGAGGCTGCCAAACATAGTGCAAGAACTGGCCGCCGGCGTGCAG
GAGCCACCGAGCCGGTACCTGCAAGACCTCGCCGGCGGTGACCAGCTCGCCGGCGCCGAG
ATACCGGAGCCCATCCCGACCATCGATCTCGGCCGGCTGTCAGGATCGGACGGTGCCGAC
GAGGCTGCCAAGCTGCGGTCGGCTCTGCAGAACTGGGGCCTCTTCCTGGTTTCTAACCAT
GGCGTTGAGACCTCACTGATCGATGCTGTGATCGAGGCTGCGAGGGAATTTTTTCGGCAG
CCAGTTGAAGAGAAGAAGAAACTGAGCAACCTGATTGATGGCAAGCGTTTTCAGATAGAA
GGGTATGGAAATGATCCTGTGCAAACCAAAGATCAGATCCTGGATTGGTCTGATCGGCTG
CATCTCAAGGTTGAGCCAGAGTGTGACAGAAATCTAGCCTTTTGGCCCACACATCCCAAA
TCTTTTAGGGATATTCTACATGAGTACACACTGAAGATCAAGACGGTCAAAAACGATATC
CTCCTCGCATTGGCCAAGCTCTTGGAGCTTGATGAGGATTGCCTCCTCAACCAGTTCAGC
GACAGGGCCATCACTACTGCCAGATTCAACTACTACTCTCCTTGTCCAAGACCTGATCTT
GTGTTAGGCCTGAAGCCTCACTCTGACCTCTGTGCTCTCACCGTTCTTCTCACTGACAAA
GAAGTCGGTGGCCTGCAAGTTCTTAGAGATGGAACATGGTACAGTGTTCCAGCTGTGCGA
GATTACTCTCTTCTGATTAACATTGGTGTTACACTGGAGATAATGACCAATGGGACCTTC
AGGGCTCCATTGCATAGGGTGGTGACAAATGCAGAGAGGGAGAGAATGTCGGTGGCCATG
TTCTACGCTGTGGATGGCGAGAAGGAGATAGAGCCGGTGGCTGAGCTGCTGGGGCTGAAG
CAACAATCAGCACGGTACAGGGGAATCAAGGGCAAGGACTTGTTGATTGGACACTATGAA
CATTTCTCTCGTGGTGGTAGAGTTGTCGATTCATTGAAGATCTAA

Peptide Sequence

PEP ID

Os06t0178700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:3900488:3903056:1 gene:Os06g0178700 transcript:Os06t0178700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Iron/ascorbate-dependent oxidoreductase. (Os06t0178700-01)
Sequence

MADEPWRLPNIVQELAAGVQEPPSRYLQDLAGGDQLAGAEIPEPIPTIDLGRLSGSDGAD
EAAKLRSALQNWGLFLVSNHGVETSLIDAVIEAAREFFRQPVEEKKKLSNLIDGKRFQIE
GYGNDPVQTKDQILDWSDRLHLKVEPECDRNLAFWPTHPKSFRDILHEYTLKIKTVKNDI
LLALAKLLELDEDCLLNQFSDRAITTARFNYYSPCPRPDLVLGLKPHSDLCALTVLLTDK
EVGGLQVLRDGTWYSVPAVRDYSLLINIGVTLEIMTNGTFRAPLHRVVTNAERERMSVAM
FYAVDGEKEIEPVAELLGLKQQSARYRGIKGKDLLIGHYEHFSRGGRVVDSLKI

Transcript Sequence

Transcript ID

Os06t0178700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:3900488:3903056:1 gene:Os06g0178700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Iron/ascorbate-dependent oxidoreductase. (Os06t0178700-01)
Sequence

ATCCATCTTGCCTAGTGCAAGCGTGCAAAGCCAAAATTCAAGAAATCACCTCGCTCCATC
AAGTGAGCAAGCAAAACCGATCGAACAAGTTCCAATGGCTGACGAGCCATGGAGGCTGCC
AAACATAGTGCAAGAACTGGCCGCCGGCGTGCAGGAGCCACCGAGCCGGTACCTGCAAGA
CCTCGCCGGCGGTGACCAGCTCGCCGGCGCCGAGATACCGGAGCCCATCCCGACCATCGA
TCTCGGCCGGCTGTCAGGATCGGACGGTGCCGACGAGGCTGCCAAGCTGCGGTCGGCTCT
GCAGAACTGGGGCCTCTTCCTGGTTTCTAACCATGGCGTTGAGACCTCACTGATCGATGC
TGTGATCGAGGCTGCGAGGGAATTTTTTCGGCAGCCAGTTGAAGAGAAGAAGAAACTGAG
CAACCTGATTGATGGCAAGCGTTTTCAGATAGAAGGGTATGGAAATGATCCTGTGCAAAC
CAAAGATCAGATCCTGGATTGGTCTGATCGGCTGCATCTCAAGGTTGAGCCAGAGTGTGA
CAGAAATCTAGCCTTTTGGCCCACACATCCCAAATCTTTTAGGGATATTCTACATGAGTA
CACACTGAAGATCAAGACGGTCAAAAACGATATCCTCCTCGCATTGGCCAAGCTCTTGGA
GCTTGATGAGGATTGCCTCCTCAACCAGTTCAGCGACAGGGCCATCACTACTGCCAGATT
CAACTACTACTCTCCTTGTCCAAGACCTGATCTTGTGTTAGGCCTGAAGCCTCACTCTGA
CCTCTGTGCTCTCACCGTTCTTCTCACTGACAAAGAAGTCGGTGGCCTGCAAGTTCTTAG
AGATGGAACATGGTACAGTGTTCCAGCTGTGCGAGATTACTCTCTTCTGATTAACATTGG
TGTTACACTGGAGATAATGACCAATGGGACCTTCAGGGCTCCATTGCATAGGGTGGTGAC
AAATGCAGAGAGGGAGAGAATGTCGGTGGCCATGTTCTACGCTGTGGATGGCGAGAAGGA
GATAGAGCCGGTGGCTGAGCTGCTGGGGCTGAAGCAACAATCAGCACGGTACAGGGGAAT
CAAGGGCAAGGACTTGTTGATTGGACACTATGAACATTTCTCTCGTGGTGGTAGAGTTGT
CGATTCATTGAAGATCTAACGAAGGGTAACCGCAAAGAGTGCTATTAGTACTACTGTACT
CTCTACATAGATAATATTATACTACTTGTAAAAACTATATGAGCCATCGATTTAGTAGGC
TATAATGGTACTTTTTCGTCTATACGAATTATGCTATTTTGT