Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0177300-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:3878788:3882766:1 gene:Os06g0177300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 protein. (Os06t0177300-01)
Sequence

ATGGAGACGCTGGCGAGCGCCATGCGGCGGGAGAACCGCCGCTTCAAGCCCCCCTCCTCC
TCCTCCGCCTCCGCCTCCGCCGCCCTCTCCTCGGGGAGGGTCCCCCTCGTCATGGCCTTC
CTCTCCTGCCTCGCGTGGCTCTACGTCGCCGGCCGGCTGTGGCAGGACGCGCAGACGCGG
ATGATCCTGTCTGGTCTCCTCGAGAAGAGCTCCGGCAATCTTCCGAAGGTGCTGTCGGTG
GAGGACAAGCTGAGGAATCTAGGATGCATTGGAATTGGGAGGAAGATTGCGGAGGCAGAA
ATGGACCTTACAAAGGCGAAGAGCGAGGGGTATCTGTGGGGGAATGGAACTGCTACTGGT
AGTTCTGACAAGAAGAAGCTCCTTGCTGTTATTGGAGTTTACACTGGTTTTGGTTCCCGG
CTCAAGAGGAACACCTTCCGTGGCTCATGGATGCCGAGAGGTGATGCTCTGAAGAAGCTT
GAGGAGAAGGGTGTGGTCATTCGTTTTGTCATTGGTCGGAGTGCAAATCGAGGTGATAGC
TTGGACCGCAACATCGATGATGAAAATCGTCGGACGAAAGATTTCTTGATTCTTGAAAGT
CATGAGGAAGCTGCAGAGGAGTTACCAAGCAAAGTTAAGTTTTTCTTCAGTGCAGCAATT
GAAGCTTGGGACGCAGAGTTCTATGTGAAAGTCGATGACAACATTAACCTTGACCTGGCT
GGATTAATTGAGATGCTTGAAGCCCGTCGAGGTAGCCAAGGACTGTACATGGGTTGCATG
AAATCAGGAGGTGTTGTAAGTGAAGAGGGTCAACAATGGTATGAACCTGAATGGTGGAAG
TTTGGAGATTCAAAAACGTATTTTCGCCATGCTTCCGGTGCTTTGTTTATCCTCTCTAAC
AATTTGGCACGCTACATTAACATAAACAGTGCATCGCTACAGAGCTATGCCCATGATGAC
ATATCAGTAGGTTCATGGATGATGGGGCTGAATACTACTTATGTTGATGACGACCGTTTG
TGCTGCGGCAGTTCTAGACAAGAGAAAGTATGTTCCCACGCATGA

Peptide Sequence

PEP ID

Os06t0177300-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:3878788:3882766:1 gene:Os06g0177300 transcript:Os06t0177300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 protein. (Os06t0177300-01)
Sequence

METLASAMRRENRRFKPPSSSSASASAALSSGRVPLVMAFLSCLAWLYVAGRLWQDAQTR
MILSGLLEKSSGNLPKVLSVEDKLRNLGCIGIGRKIAEAEMDLTKAKSEGYLWGNGTATG
SSDKKKLLAVIGVYTGFGSRLKRNTFRGSWMPRGDALKKLEEKGVVIRFVIGRSANRGDS
LDRNIDDENRRTKDFLILESHEEAAEELPSKVKFFFSAAIEAWDAEFYVKVDDNINLDLA
GLIEMLEARRGSQGLYMGCMKSGGVVSEEGQQWYEPEWWKFGDSKTYFRHASGALFILSN
NLARYININSASLQSYAHDDISVGSWMMGLNTTYVDDDRLCCGSSRQEKVCSHA

Transcript Sequence

Transcript ID

Os06t0177300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:3878788:3882766:1 gene:Os06g0177300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 protein. (Os06t0177300-01)
Sequence

GAGCTGCAGTGTGTCCGAAGCTTTTCTTCTCTACCAGCGGCAGCGGCGGCTGGTAGGGAG
GAGGAGATCGCCACCAGATCGCCATGGAGACGCTGGCGAGCGCCATGCGGCGGGAGAACC
GCCGCTTCAAGCCCCCCTCCTCCTCCTCCGCCTCCGCCTCCGCCGCCCTCTCCTCGGGGA
GGGTCCCCCTCGTCATGGCCTTCCTCTCCTGCCTCGCGTGGCTCTACGTCGCCGGCCGGC
TGTGGCAGGACGCGCAGACGCGGATGATCCTGTCTGGTCTCCTCGAGAAGAGCTCCGGCA
ATCTTCCGAAGGTGCTGTCGGTGGAGGACAAGCTGAGGAATCTAGGATGCATTGGAATTG
GGAGGAAGATTGCGGAGGCAGAAATGGACCTTACAAAGGCGAAGAGCGAGGGGTATCTGT
GGGGGAATGGAACTGCTACTGGTAGTTCTGACAAGAAGAAGCTCCTTGCTGTTATTGGAG
TTTACACTGGTTTTGGTTCCCGGCTCAAGAGGAACACCTTCCGTGGCTCATGGATGCCGA
GAGGTGATGCTCTGAAGAAGCTTGAGGAGAAGGGTGTGGTCATTCGTTTTGTCATTGGTC
GGAGTGCAAATCGAGGTGATAGCTTGGACCGCAACATCGATGATGAAAATCGTCGGACGA
AAGATTTCTTGATTCTTGAAAGTCATGAGGAAGCTGCAGAGGAGTTACCAAGCAAAGTTA
AGTTTTTCTTCAGTGCAGCAATTGAAGCTTGGGACGCAGAGTTCTATGTGAAAGTCGATG
ACAACATTAACCTTGACCTGGCTGGATTAATTGAGATGCTTGAAGCCCGTCGAGGTAGCC
AAGGACTGTACATGGGTTGCATGAAATCAGGAGGTGTTGTAAGTGAAGAGGGTCAACAAT
GGTATGAACCTGAATGGTGGAAGTTTGGAGATTCAAAAACGTATTTTCGCCATGCTTCCG
GTGCTTTGTTTATCCTCTCTAACAATTTGGCACGCTACATTAACATAAACAGTGCATCGC
TACAGAGCTATGCCCATGATGACATATCAGTAGGTTCATGGATGATGGGGCTGAATACTA
CTTATGTTGATGACGACCGTTTGTGCTGCGGCAGTTCTAGACAAGAGAAAGTATGTTCCC
ACGCATGAGTTAGCAGCACGCATGGTTATGACGGTGGTGTCCTGATGAAGAGGTGACGCT
GTATATTTTGCCATTTTGTATACACCAAGCGGCTTCTGGAATGAAAAATAGATACATCAT
TTCAAACGCTGCTTTATCCGATCAGTATACTTAAATACAAGTGTAGGGGAACTAGTTGAC
AAAAACTATAAAAGCGCTGAGCTTATTTTTGGTGGAGCTTCCTGTT