Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0177100-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:3870074:3871150:1 gene:Os06g0177100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PAC1A description:Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3). (Os06t0177100-01)
Sequence	ATGTCTCGCCGGTACGACAGCCGCACGACGATCTTCTCGCCGGAGGGGCGGCTCTACCAG GTGGAGTACGCGATGGAGGCGATCGGGAACGCAGGGTCGGCCCTGGGCGTCCTGGCGGCC GACGGCGTGGTCCTCGTCGGCGAGAAGAAGGTCACCTCCAAGCTCCTCCAGACCTCGCGC TCCGCCGAGAAGATGTACAAGATCGACTCCCACCTCGCCTGCGCCGTCGCCGGGATCATG TCGGACGCCAACATCCTCCTCAACACGGCGCGCCTCCACGCCCAGCGCTACGCCCTCTCC TACCAGGAGCCCATCCCCGTCGAGCAGCTCGTCCAATCCCTCTGCGACACCAAGCAGGGG TACACCCAGTTCGGCGGCCTCCGCCCCTTCGGCGTCTCCTTCCTCTTCGCCGGCTGGGAC AAGCACCATGGCTTCCAGCTCTACATGAGCGACCCCTCCGGCAACTACAGCGGCTGGAAG GCCGCCGCCGTCGGGGCCAACAGCCAGGCGGCGCAGTCCATGCTCAAGCAGGACTACCGC GACGGGATGACACGGGAGGAGGCCGTCGCCCTCGCCCTCAAGGTGCTTAGCAAGACCATG GATTCGACCAGCTTGACCGCCGAGAAGCTGGAGCTCGCCGAGGTGTTCTTGCAGCCCGGC ACCGGGGAGGTGCAGTACCAGGTGTGCTCGCCTGAGGCGATGGGGAAGCTGCTCGCCAAG GCCGGCCTCTCGCAGCCGGCGCCTGAGGCTTGA

Peptide Sequence

PEP ID	Os06t0177100-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:3870074:3871150:1 gene:Os06g0177100 transcript:Os06t0177100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PAC1A description:Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3). (Os06t0177100-01)
Sequence	MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSR SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQG YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYR DGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLLAK AGLSQPAPEA

Transcript Sequence

Transcript ID	Os06t0177100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3870074:3871150:1 gene:Os06g0177100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PAC1A description:Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3). (Os06t0177100-01)
Sequence	ACATCTCAACTGAATTAGTAATAGTAGATCTCTCGCCGTCGCCGCCTCCGCCTCCGCCGC CGGAATCCCCAGCAACAACCCGCCGCCGCGATGTCTCGCCGGTACGACAGCCGCACGACG ATCTTCTCGCCGGAGGGGCGGCTCTACCAGGTGGAGTACGCGATGGAGGCGATCGGGAAC GCAGGGTCGGCCCTGGGCGTCCTGGCGGCCGACGGCGTGGTCCTCGTCGGCGAGAAGAAG GTCACCTCCAAGCTCCTCCAGACCTCGCGCTCCGCCGAGAAGATGTACAAGATCGACTCC CACCTCGCCTGCGCCGTCGCCGGGATCATGTCGGACGCCAACATCCTCCTCAACACGGCG CGCCTCCACGCCCAGCGCTACGCCCTCTCCTACCAGGAGCCCATCCCCGTCGAGCAGCTC GTCCAATCCCTCTGCGACACCAAGCAGGGGTACACCCAGTTCGGCGGCCTCCGCCCCTTC GGCGTCTCCTTCCTCTTCGCCGGCTGGGACAAGCACCATGGCTTCCAGCTCTACATGAGC GACCCCTCCGGCAACTACAGCGGCTGGAAGGCCGCCGCCGTCGGGGCCAACAGCCAGGCG GCGCAGTCCATGCTCAAGCAGGACTACCGCGACGGGATGACACGGGAGGAGGCCGTCGCC CTCGCCCTCAAGGTGCTTAGCAAGACCATGGATTCGACCAGCTTGACCGCCGAGAAGCTG GAGCTCGCCGAGGTGTTCTTGCAGCCCGGCACCGGGGAGGTGCAGTACCAGGTGTGCTCG CCTGAGGCGATGGGGAAGCTGCTCGCCAAGGCCGGCCTCTCGCAGCCGGCGCCTGAGGCT TGATCTACTGAGATGGTTTGCTTCTTGTTCTCGCAATTCGGTTGGTGTTTAATCCATGTG ATGGTAAACAGTTGATGAATTTAGTATAAATTTTCTTTTAAGAGTTGCCATCAGCTATGG TTTGAAATCAATCCAGATTGTTGTGTGTTATCGTCCTATTTCTTATCAGCAAGAACCCTT CTTAGTGATTATATGGTTATATTGAGTATATTTATAGAGCCCAAATACCTTGGACAT