Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0173100-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:3689676:3694342:1 gene:Os06g0173100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE ATPASE SUBUNIT 5B description:Similar to 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1). (Os06t0173100-01)
Sequence	ATGACGTCATCCGGCGCTCCCCCGCCGGCGGCGATGGCCGTGGACGACGCGGAGGACGAC CAGCTCGCCTCCATGTCCACGGAGGACATCGTCCGTGCCTCCCGCCTACTCGACAACGAG ATCCGCGTCCTCAAGGATGAGCTGCAGCGGACCAACTTGGAGCTGGAATCGTTCAAGGAG AAGATTAAGGAGAACCAGGAGAAGATTAAGCTCAACAAGCAGCTTCCCTACCTCGTCGGC AACATCGTTGAGATTCTGGAAATGAACCCTGAGGATGAAGCTGAGGAGGATGGTGCTAAT ATTGATTTAGACTCACAAAGGAAAGGAAAATGTGTTGTTCTGAAGACTTCCACAAGACAA ACTATATTCCTTCCTGTGGTTGGGCTAGTTGACCCTGATAAACTCAAGCCTGGTGATTTG GTTGGAGTAAACAAAGACAGCTACCTTATACTGGACACACTGCCATCAGAGTATGATTCA CGAGTAAAGGCAATGGAGGTGGATGAAAAACCCACAGAGGACTACAATGATATTGGAGGT CTTGAAAAGCAGATTCAAGAGCTTGTGGAGGCAATTGTTTTGCCAATGACACACAAAGAT CGGTTCCAAAAGTTGGGCATTCGCCCCCCCAAAGGAGTTCTTTTGTATGGACCACCTGGA ACTGGGAAGACATTGATGGCTCGTGCATGTGCTGCACAGACAAATGCGACGTTCCTGAAA TTAGCTGGTCCACAATTAGTCCAGATGTTTATCGGTGATGGAGCAAAGCTGGTTCGGGAT GCTTTTCAGCTTGCTAAGGAGAAAGCTCCCTGCATCATTTTCATTGATGAGATTGATGCC ATTGGGACTAAGAGGTTTGACAGTGAGGTTAGTGGTGACAGAGAAGTTCAGAGGACTATG TTGGAATTGCTGAACCAACTCGATGGATTTAGTAGTGACGAGCGGATAAAGGTCATAGCG GCAACGAATCGTGCTGACATTCTTGATCCTGCTTTGATGCGATCTGGTCGTTTGGACCGA AAGATTGAGTTTCCTCATCCATCTGAAGAAGCAAGAGCTAGAATCTTGCAAATTCACTCA AGAAAAATGAATGTAAACCCAGATGTGAATTTTGAAGAGCTGGCTCGCTCAACAGATGAC TTCAATGGAGCGCAACTGAAAGCTGTTTGTGTCGAAGCTGGTATGCTTGCACTGCGGCGA GATGCTACAGAGGTGACTCATGAGGACTTCAACGAAGGCATAATACAGGTGCAGGCTAAG AAGAAGTCTAGCCTAAATTATTACGCTTAA

Peptide Sequence

PEP ID	Os06t0173100-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:3689676:3694342:1 gene:Os06g0173100 transcript:Os06t0173100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE ATPASE SUBUNIT 5B description:Similar to 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1). (Os06t0173100-01)
Sequence	MTSSGAPPPAAMAVDDAEDDQLASMSTEDIVRASRLLDNEIRVLKDELQRTNLELESFKE KIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ TIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGG LEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK LAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTM LELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHS RKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAK KKSSLNYYA

Transcript Sequence

Transcript ID	Os06t0173100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3689676:3694342:1 gene:Os06g0173100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE ATPASE SUBUNIT 5B description:Similar to 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1). (Os06t0173100-01)
Sequence	ACTAGCTCAGTCGCTCGCCTCCGCTGCTGGTGTCGAGCCGCTTCCGATCCCCCCCCCTCC CGACGCGAGGCCGAAACCCTACCGCCGATGACGTCATCCGGCGCTCCCCCGCCGGCGGCG ATGGCCGTGGACGACGCGGAGGACGACCAGCTCGCCTCCATGTCCACGGAGGACATCGTC CGTGCCTCCCGCCTACTCGACAACGAGATCCGCGTCCTCAAGGATGAGCTGCAGCGGACC AACTTGGAGCTGGAATCGTTCAAGGAGAAGATTAAGGAGAACCAGGAGAAGATTAAGCTC AACAAGCAGCTTCCCTACCTCGTCGGCAACATCGTTGAGATTCTGGAAATGAACCCTGAG GATGAAGCTGAGGAGGATGGTGCTAATATTGATTTAGACTCACAAAGGAAAGGAAAATGT GTTGTTCTGAAGACTTCCACAAGACAAACTATATTCCTTCCTGTGGTTGGGCTAGTTGAC CCTGATAAACTCAAGCCTGGTGATTTGGTTGGAGTAAACAAAGACAGCTACCTTATACTG GACACACTGCCATCAGAGTATGATTCACGAGTAAAGGCAATGGAGGTGGATGAAAAACCC ACAGAGGACTACAATGATATTGGAGGTCTTGAAAAGCAGATTCAAGAGCTTGTGGAGGCA ATTGTTTTGCCAATGACACACAAAGATCGGTTCCAAAAGTTGGGCATTCGCCCCCCCAAA GGAGTTCTTTTGTATGGACCACCTGGAACTGGGAAGACATTGATGGCTCGTGCATGTGCT GCACAGACAAATGCGACGTTCCTGAAATTAGCTGGTCCACAATTAGTCCAGATGTTTATC GGTGATGGAGCAAAGCTGGTTCGGGATGCTTTTCAGCTTGCTAAGGAGAAAGCTCCCTGC ATCATTTTCATTGATGAGATTGATGCCATTGGGACTAAGAGGTTTGACAGTGAGGTTAGT GGTGACAGAGAAGTTCAGAGGACTATGTTGGAATTGCTGAACCAACTCGATGGATTTAGT AGTGACGAGCGGATAAAGGTCATAGCGGCAACGAATCGTGCTGACATTCTTGATCCTGCT TTGATGCGATCTGGTCGTTTGGACCGAAAGATTGAGTTTCCTCATCCATCTGAAGAAGCA AGAGCTAGAATCTTGCAAATTCACTCAAGAAAAATGAATGTAAACCCAGATGTGAATTTT GAAGAGCTGGCTCGCTCAACAGATGACTTCAATGGAGCGCAACTGAAAGCTGTTTGTGTC GAAGCTGGTATGCTTGCACTGCGGCGAGATGCTACAGAGGTGACTCATGAGGACTTCAAC GAAGGCATAATACAGGTGCAGGCTAAGAAGAAGTCTAGCCTAAATTATTACGCTTAACAA GCTATGCTAGAATCATCAGGGCTCTGGAGTTGTTTGTAACCATACTGTTTGGATAATCGA AAATATGGCTTCACGTTTCATTTGAGGTATAACTTTTTTACACTATAAAGTCATCACTTG CTTCTTATGTGATGGAAAGTTGGAAACTGGAAAGCTTCTTATGTGATGGAAACTGGAAAG TTTTTGTTT