Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0173000-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:3682377:3688555:1 gene:Os06g0173000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os06t0173000-00)
Sequence	ATGCCGCCGCCGCCGGCGCCGCCGTCCGTGGAGCGGCAGGTGGCGGAGATAGCCGCCGAG CCCGACCGCGCCTCCGCGTACGCGCGTCTCCTCCACCTGCAGCGCGCGTGCGCCGATGAC CCCTCCGCGGCCGCCGACCTCGCCGCAGCCTCCCCTTCCATCCTCCTCCCGCTCCTCCTA CGCGACGCCGGTGACCGTGATGAGGCCGTCGCCGCCTCCGCGCTCAAGTGCCTTGGCTTC ACGCTCTACCATCCGGTCCTCGTCTCCACCGTCTCAGGGCAGATGGCTCAGTCAGTATTA GATACCGTGATACAGCTAATCATGACCACTCAGATGAAGGCTATTTGTAATCTGGGTGTG TGGTGCATCTCTGTGCAAGAATTGGAGGCTGTCGTTGTAGATCATCGAGCAACTTCTTTG CTAACTGCTATTGTTCATGCCATTGACAATCCATTTTGTTCTTTGTCTACAACATTTGAG GCTGTTCAGGCTATCATGAAACTTACGAGTCAAAATCCAGAAAAAATGAGGGAACTATCA AGCATATGGGTTCCACCGATATACCGAAGACTCTTGAGTGTTGATAAGGCAGAAAGGGAT ATGGCAGAAAGGTGCCTGATTAAAGTGTCATCTGTTGTTTTACCACCACAATCTCTTCTA TCGAAGGCAATAGCTTCAGACCTTGAGCATTCTCTGCTCTCTTGTATGTTGAATATGATC CATGATCCTGTAAAGAAAGTTCAAGCAGTGAAGTCATGGGGCTGGTACATATCCTTACTT GGCTTACATGTGGTGGATAATAGACATCTACTTAATAAAATCCTTAAGGTCCCTGAGCAG TTGTTCATTGATTCTGATACGCAAGTCCAGATTGCCACAATGGTTGCCTGGAGAAATTTG GTGAATGCATTTCTTCCTCAGGCTTCGGAGACTTTGGTTCCAAAAACTAAAATTTCTCCC ATTGAATCCAGAGCAGATACAAATGCTCAGTTGAAAAAGATAAGGCTAATTATGATGCCT TTGGGTCGAATTCTGTCAAGAAGTCATAGTATTGCTTTAAGTTCTTCCTGCTTGAGCACA TGGCATCACCTCTTATATAAACTTGGTGATTTGATAAATCAGCTACCTATTCTGGAGGCT GCTTTTGGGCCAGTACTCAAAATAGTTTTCTCCATTGGACCAGATATTCAGAATAAGCCG CTTTATTCATTTTGTGTCAATCTGTTTCATGAATATATTTCAACAAAAGTCCGAGACATG GCCTCACATGGAGAGTATTTGCCCATTCCACTGAATCAGAACTTGCTGTCCCAATCCTGT ATACATCTCAAGACCTTGATGGATGGTCAGTGTATCAGATGGTTACCATGGGATGTTACT TGCTTTGATTTTCATTTGGACATCCTGGTCTGTATTGTAAATCCAGAACTACTTCGTAAG ATGACTCTTGAAAGCGTGGTGACTGTTATGGATTCTGCTACGCATATTTTCAGATTGCTT GTTCAGGGAGTTCAAGTTGATTGTAAAGCAAAATGTGCTAATGGCAACGCTCAGATTTGC GTTGCTAAGGTGTGCAAGTTTGTGAAGAAGGTGTTTATGGATCTTGTAGGAAAGCAAAAC AACAACAATTGTTCAGTGTTACTGCAATATGCTTTTCAGTTTGTGAAAGTTATTTTGGAG GAATTGGATCATTGCCTACTGGCTTCTGGAATCTGTGTGATAGGCTTAGACATCGAACAC ATAAAAGAGATGGAATATGCAGATTGCAGCCCAAAGTTATCATATCCAGGAATGAAGTCA TATTCTTACATGGAAATGGTTTCTCCAGAAGTTTACATGATTGTCCTGTCTCTATCAATT GTAGCTGAGTTTACTGGAGAGCTCTCACATGGAGATGCTGAGCAATTGGCTATAATTATT TGCTTATCCAATTTCCAGGACAATTTTCATGCTGCTGTTTCTTTTATGTATAAGCAGATC ATGCTTCTGACAGATAATAGGCTAAGAATGAGATGGTTGATGGTGTGGAACAAAATTGCG AAGCGCTTGAATGGGCAAATTACGCCAAACTTAAAAAAAATTATCTGCGGCGCAGGTGTC CATGATGTACTCTATCAGTTCTTCTGCTATCCATTTTTTGCTTTCCTATTGCCTGGGAGG AAATCTACTCTCTGTGGCTCTGAAAGTTCTTCTGAGTCATACCTTTCTTTGACACATGAC CTAGAGGTGGAAGTGGCTATTGAGGTTTATAGATCCATTTGTGCAAACTCCAATCATGGT CCAGAGGCTGATCACAAGGTTTTCCTGGAGAGCTTTTGTGGATTTGTTGTAAGCATAATT GATGAAAACATCTCCCTGTTCCAAGCCAACATTGAGTACTGTTCAGAGAAGAAGTTTAAA AATTGTGCTATCCTTTCTACTCTTGGCGAACTAGTTAGCGGATTATTAGAGAATGGTCAT ATTTTGAACTACGCTATCAAAGAGCCAACAGAAGCAAGTGAAGAGTCTGCTGGATATAGC CAGCCTAGCATCCTTCTGTGTTGCTTGAGGCTTGTTAGCAGGTTTATGGGACTGTCAACT ATTGTTATCAAAGCAAATCCAACTACCCAACACCAGATCATGAGCAGGGTTTTTTCATCT TTATCTGCGTTCGCTGGGTATCTTCTGTTGAAGAAAGATGTTCTTCTATTCTTTGAGATA ATTGGAGAGCAACTAACTGAATGTCTCTCTTTATCTGGCACATTATACCGTGAAATGCAA CATGGGGAAACCATTAATCAGATTGAGAAACTCTGGCTCAAGATCATCATGTGCCTAAAG ATGAGCAAGCTCATCAATGATTGTTCCTTCCTTCAAAAGCAGCAAATGCTACTTCAAGCG GCAGTCAGTCACCCACATCGTCCCATTTCGGTTGCAACTACACCAGCCTGGAGAGCATCA AGATATGATATCTCAACCTTGCAGCACTCATCATTCTCCCTTTCTAAACTGGATAAATTG CCAATGGAGAGAAGAAAAGATCTTACTGACCCTTGCACTCCTCACAATGCCATCGCGCTC GAAGAAATCGACATTTTGAGGAAGTTCAAACACCCAATTTCTGAGTTGGAGAAGAATGAT GAATCTATTAAGATCTCTGTGGGTCTAGGGAGAAAGAGGTTGAAGATCATGAAGTACTCA ATGAAGCCAAGGGAACCTGGAAAAAGTACAGTTCCTCCTGGTAATTTTAGCTCTAAAAAG GATACTGATGCTGATGCCTTCTCATCGCATTACATGGAAAGCAAAGCGTGTAGGAAACCG GAATTAATACTTGAAATGCTTAAAAGAAAAAGATAG

Peptide Sequence

PEP ID	Os06t0173000-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:3682377:3688555:1 gene:Os06g0173000 transcript:Os06t0173000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os06t0173000-00)
Sequence	MPPPPAPPSVERQVAEIAAEPDRASAYARLLHLQRACADDPSAAADLAAASPSILLPLLL RDAGDRDEAVAASALKCLGFTLYHPVLVSTVSGQMAQSVLDTVIQLIMTTQMKAICNLGV WCISVQELEAVVVDHRATSLLTAIVHAIDNPFCSLSTTFEAVQAIMKLTSQNPEKMRELS SIWVPPIYRRLLSVDKAERDMAERCLIKVSSVVLPPQSLLSKAIASDLEHSLLSCMLNMI HDPVKKVQAVKSWGWYISLLGLHVVDNRHLLNKILKVPEQLFIDSDTQVQIATMVAWRNL VNAFLPQASETLVPKTKISPIESRADTNAQLKKIRLIMMPLGRILSRSHSIALSSSCLST WHHLLYKLGDLINQLPILEAAFGPVLKIVFSIGPDIQNKPLYSFCVNLFHEYISTKVRDM ASHGEYLPIPLNQNLLSQSCIHLKTLMDGQCIRWLPWDVTCFDFHLDILVCIVNPELLRK MTLESVVTVMDSATHIFRLLVQGVQVDCKAKCANGNAQICVAKVCKFVKKVFMDLVGKQN NNNCSVLLQYAFQFVKVILEELDHCLLASGICVIGLDIEHIKEMEYADCSPKLSYPGMKS YSYMEMVSPEVYMIVLSLSIVAEFTGELSHGDAEQLAIIICLSNFQDNFHAAVSFMYKQI MLLTDNRLRMRWLMVWNKIAKRLNGQITPNLKKIICGAGVHDVLYQFFCYPFFAFLLPGR KSTLCGSESSSESYLSLTHDLEVEVAIEVYRSICANSNHGPEADHKVFLESFCGFVVSII DENISLFQANIEYCSEKKFKNCAILSTLGELVSGLLENGHILNYAIKEPTEASEESAGYS QPSILLCCLRLVSRFMGLSTIVIKANPTTQHQIMSRVFSSLSAFAGYLLLKKDVLLFFEI IGEQLTECLSLSGTLYREMQHGETINQIEKLWLKIIMCLKMSKLINDCSFLQKQQMLLQA AVSHPHRPISVATTPAWRASRYDISTLQHSSFSLSKLDKLPMERRKDLTDPCTPHNAIAL EEIDILRKFKHPISELEKNDESIKISVGLGRKRLKIMKYSMKPREPGKSTVPPGNFSSKK DTDADAFSSHYMESKACRKPELILEMLKRKR

Transcript Sequence

Transcript ID	Os06t0173000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3682377:3688555:1 gene:Os06g0173000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os06t0173000-00)
Sequence	ATGCCGCCGCCGCCGGCGCCGCCGTCCGTGGAGCGGCAGGTGGCGGAGATAGCCGCCGAG CCCGACCGCGCCTCCGCGTACGCGCGTCTCCTCCACCTGCAGCGCGCGTGCGCCGATGAC CCCTCCGCGGCCGCCGACCTCGCCGCAGCCTCCCCTTCCATCCTCCTCCCGCTCCTCCTA CGCGACGCCGGTGACCGTGATGAGGCCGTCGCCGCCTCCGCGCTCAAGTGCCTTGGCTTC ACGCTCTACCATCCGGTCCTCGTCTCCACCGTCTCAGGGCAGATGGCTCAGTCAGTATTA GATACCGTGATACAGCTAATCATGACCACTCAGATGAAGGCTATTTGTAATCTGGGTGTG TGGTGCATCTCTGTGCAAGAATTGGAGGCTGTCGTTGTAGATCATCGAGCAACTTCTTTG CTAACTGCTATTGTTCATGCCATTGACAATCCATTTTGTTCTTTGTCTACAACATTTGAG GCTGTTCAGGCTATCATGAAACTTACGAGTCAAAATCCAGAAAAAATGAGGGAACTATCA AGCATATGGGTTCCACCGATATACCGAAGACTCTTGAGTGTTGATAAGGCAGAAAGGGAT ATGGCAGAAAGGTGCCTGATTAAAGTGTCATCTGTTGTTTTACCACCACAATCTCTTCTA TCGAAGGCAATAGCTTCAGACCTTGAGCATTCTCTGCTCTCTTGTATGTTGAATATGATC CATGATCCTGTAAAGAAAGTTCAAGCAGTGAAGTCATGGGGCTGGTACATATCCTTACTT GGCTTACATGTGGTGGATAATAGACATCTACTTAATAAAATCCTTAAGGTCCCTGAGCAG TTGTTCATTGATTCTGATACGCAAGTCCAGATTGCCACAATGGTTGCCTGGAGAAATTTG GTGAATGCATTTCTTCCTCAGGCTTCGGAGACTTTGGTTCCAAAAACTAAAATTTCTCCC ATTGAATCCAGAGCAGATACAAATGCTCAGTTGAAAAAGATAAGGCTAATTATGATGCCT TTGGGTCGAATTCTGTCAAGAAGTCATAGTATTGCTTTAAGTTCTTCCTGCTTGAGCACA TGGCATCACCTCTTATATAAACTTGGTGATTTGATAAATCAGCTACCTATTCTGGAGGCT GCTTTTGGGCCAGTACTCAAAATAGTTTTCTCCATTGGACCAGATATTCAGAATAAGCCG CTTTATTCATTTTGTGTCAATCTGTTTCATGAATATATTTCAACAAAAGTCCGAGACATG GCCTCACATGGAGAGTATTTGCCCATTCCACTGAATCAGAACTTGCTGTCCCAATCCTGT ATACATCTCAAGACCTTGATGGATGGTCAGTGTATCAGATGGTTACCATGGGATGTTACT TGCTTTGATTTTCATTTGGACATCCTGGTCTGTATTGTAAATCCAGAACTACTTCGTAAG ATGACTCTTGAAAGCGTGGTGACTGTTATGGATTCTGCTACGCATATTTTCAGATTGCTT GTTCAGGGAGTTCAAGTTGATTGTAAAGCAAAATGTGCTAATGGCAACGCTCAGATTTGC GTTGCTAAGGTGTGCAAGTTTGTGAAGAAGGTGTTTATGGATCTTGTAGGAAAGCAAAAC AACAACAATTGTTCAGTGTTACTGCAATATGCTTTTCAGTTTGTGAAAGTTATTTTGGAG GAATTGGATCATTGCCTACTGGCTTCTGGAATCTGTGTGATAGGCTTAGACATCGAACAC ATAAAAGAGATGGAATATGCAGATTGCAGCCCAAAGTTATCATATCCAGGAATGAAGTCA TATTCTTACATGGAAATGGTTTCTCCAGAAGTTTACATGATTGTCCTGTCTCTATCAATT GTAGCTGAGTTTACTGGAGAGCTCTCACATGGAGATGCTGAGCAATTGGCTATAATTATT TGCTTATCCAATTTCCAGGACAATTTTCATGCTGCTGTTTCTTTTATGTATAAGCAGATC ATGCTTCTGACAGATAATAGGCTAAGAATGAGATGGTTGATGGTGTGGAACAAAATTGCG AAGCGCTTGAATGGGCAAATTACGCCAAACTTAAAAAAAATTATCTGCGGCGCAGGTGTC CATGATGTACTCTATCAGTTCTTCTGCTATCCATTTTTTGCTTTCCTATTGCCTGGGAGG AAATCTACTCTCTGTGGCTCTGAAAGTTCTTCTGAGTCATACCTTTCTTTGACACATGAC CTAGAGGTGGAAGTGGCTATTGAGGTTTATAGATCCATTTGTGCAAACTCCAATCATGGT CCAGAGGCTGATCACAAGGTTTTCCTGGAGAGCTTTTGTGGATTTGTTGTAAGCATAATT GATGAAAACATCTCCCTGTTCCAAGCCAACATTGAGTACTGTTCAGAGAAGAAGTTTAAA AATTGTGCTATCCTTTCTACTCTTGGCGAACTAGTTAGCGGATTATTAGAGAATGGTCAT ATTTTGAACTACGCTATCAAAGAGCCAACAGAAGCAAGTGAAGAGTCTGCTGGATATAGC CAGCCTAGCATCCTTCTGTGTTGCTTGAGGCTTGTTAGCAGGTTTATGGGACTGTCAACT ATTGTTATCAAAGCAAATCCAACTACCCAACACCAGATCATGAGCAGGGTTTTTTCATCT TTATCTGCGTTCGCTGGGTATCTTCTGTTGAAGAAAGATGTTCTTCTATTCTTTGAGATA ATTGGAGAGCAACTAACTGAATGTCTCTCTTTATCTGGCACATTATACCGTGAAATGCAA CATGGGGAAACCATTAATCAGATTGAGAAACTCTGGCTCAAGATCATCATGTGCCTAAAG ATGAGCAAGCTCATCAATGATTGTTCCTTCCTTCAAAAGCAGCAAATGCTACTTCAAGCG GCAGTCAGTCACCCACATCGTCCCATTTCGGTTGCAACTACACCAGCCTGGAGAGCATCA AGATATGATATCTCAACCTTGCAGCACTCATCATTCTCCCTTTCTAAACTGGATAAATTG CCAATGGAGAGAAGAAAAGATCTTACTGACCCTTGCACTCCTCACAATGCCATCGCGCTC GAAGAAATCGACATTTTGAGGAAGTTCAAACACCCAATTTCTGAGTTGGAGAAGAATGAT GAATCTATTAAGATCTCTGTGGGTCTAGGGAGAAAGAGGTTGAAGATCATGAAGTACTCA ATGAAGCCAAGGGAACCTGGAAAAAGTACAGTTCCTCCTGGTAATTTTAGCTCTAAAAAG GATACTGATGCTGATGCCTTCTCATCGCATTACATGGAAAGCAAAGCGTGTAGGAAACCG GAATTAATACTTGAAATGCTTAAAAGAAAAAGATAG