Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0172200-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:3649517:3650686:1 gene:Os06g0172200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 30 description:EF-Hand type domain containing protein. (Os06t0172200-02)
Sequence	ATGGCGCCTCTCCTCCTCCTCTTCCTCCTCGGCGGCCTCTGCGCCCTCTTCTCCCTCGCC TCCTCCTCGCCAGCGACCAAGAAGTGCGGCGATGCCAAGAAGCGGAGAGAGGAGGAGGGG GAGGAGGTGGTGGTGGTGGCCAAGAAGAGGCCGGAGGAGGAGCCGCGGCGGCCTGACCCG GACGCCGACCTCGGGATCGTGTTCTCCACGTTCGACCACGACGGCGACGGCTTCATCACG GCGGCGGAGCTGGAGGAGTCCCTGAAGCGCCTCGGCATCGCCGTGTCGTCCGCCGCCGAG GCCGCCGCCCTGGTGGCCCGCGTCGACGCCAACAGCGACGGGCTCATCGATATCCACGAG TTCCGCGAGCTCTACGACTCCATCCCCAAGCGGCGCAAGAGCCACCAGCAGCACCCGCTC CCCTCCACCGCCGCCGCCGACGAGGAAGCCGCCGCCGCTGACGAGGAGTATGAAGCAGAG GAGGAGGAGAGGGACCTGAGGGAGGCGTTCGACGTGTTCGACGGCAACAAGGACGGCCTC ATCTCCGCCGAGGAGCTCGGCACCGTGCTCGAGTCCCTCGGCCTCCGCCAGCACGGCGGC CGCCCCGCCGTCGCCGAGTGCCGCGACATGATCCGCCTCGTCGACAGCGACGGCGACGGC ATGGTCAGCTTCGAGGAGTTCAAGCGCATGATGACCGTCGTCAAGGCCTAG

Peptide Sequence

PEP ID	Os06t0172200-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:3649517:3650686:1 gene:Os06g0172200 transcript:Os06t0172200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 30 description:EF-Hand type domain containing protein. (Os06t0172200-02)
Sequence	MAPLLLLFLLGGLCALFSLASSSPATKKCGDAKKRREEEGEEVVVVAKKRPEEEPRRPDP DADLGIVFSTFDHDGDGFITAAELEESLKRLGIAVSSAAEAAALVARVDANSDGLIDIHE FRELYDSIPKRRKSHQQHPLPSTAAADEEAAAADEEYEAEEEERDLREAFDVFDGNKDGL ISAEELGTVLESLGLRQHGGRPAVAECRDMIRLVDSDGDGMVSFEEFKRMMTVVKA

Transcript Sequence

Transcript ID	Os06t0172200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3649517:3650686:1 gene:Os06g0172200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 30 description:EF-Hand type domain containing protein. (Os06t0172200-02)
Sequence	ATTCACATTCACTCGCTGCCAACCCCAACCACCACCCATGGCGCCTCTCCTCCTCCTCTT CCTCCTCGGCGGCCTCTGCGCCCTCTTCTCCCTCGCCTCCTCCTCGCCAGCGACCAAGAA GTGCGGCGATGCCAAGAAGCGGAGAGAGGAGGAGGGGGAGGAGGTGGTGGTGGTGGCCAA GAAGAGGCCGGAGGAGGAGCCGCGGCGGCCTGACCCGGACGCCGACCTCGGGATCGTGTT CTCCACGTTCGACCACGACGGCGACGGCTTCATCACGGCGGCGGAGCTGGAGGAGTCCCT GAAGCGCCTCGGCATCGCCGTGTCGTCCGCCGCCGAGGCCGCCGCCCTGGTGGCCCGCGT CGACGCCAACAGCGACGGGCTCATCGATATCCACGAGTTCCGCGAGCTCTACGACTCCAT CCCCAAGCGGCGCAAGAGCCACCAGCAGCACCCGCTCCCCTCCACCGCCGCCGCCGACGA GGAAGCCGCCGCCGCTGACGAGGAGTATGAAGCAGAGGAGGAGGAGAGGGACCTGAGGGA GGCGTTCGACGTGTTCGACGGCAACAAGGACGGCCTCATCTCCGCCGAGGAGCTCGGCAC CGTGCTCGAGTCCCTCGGCCTCCGCCAGCACGGCGGCCGCCCCGCCGTCGCCGAGTGCCG CGACATGATCCGCCTCGTCGACAGCGACGGCGACGGCATGGTCAGCTTCGAGGAGTTCAA GCGCATGATGACCGTCGTCAAGGCCTAGCACCAAGGCGGGCAATCTCCAACTTCTATCAA ATTCAAATTCAAAAACCAAAATTCGGAGCGGATTCGCAAAGGCAAGTAACCTCAATTTGT TCTTGGACACGACGAGGCTCGCAGATCGATCGGCGGGAGAGAGAAATCAAAGCAAAAAAT CAATTGTTTGTGAGTGGAGTTGAAGACTAACCAGCTTCTTCTTCTCGCTCGCTTTGTGTT TCTTCCCACCTGTTCTTGATCACTTTCTTTGGTTTTTTTTCTCTCTTTTTTGCAGTCTAA TTAACCTCGTAATTCAGTGCCTGTTTTGACTGACAAGTTTCAAATATATGCATGTAAATA TTAGTTCCTGCTACCTACTGTCAGGTTATTAATTTGTCCAAAAGAAACAGTGGCTGAAAT GGAAAGGTTTAATTGATATTATTAGCTGTT