Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0171900-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:3635515:3639434:1 gene:Os06g0171900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SALT RESPONSIVE WD40 PROTEIN 3 description:WD40 subfamily protein, Salt stress (Os06t0171900-01);Similar to GAMYB-binding protein (Fragment). (Os06t0171900-02)
Sequence	TTATGGGCAACGTCGAAGCATGATGTCTACTTCATGTCAAATTCCACAGTAGGCCACTGG TCATCATTGTCTCACAATCTATCAGAGGTTCTTGATTTCTCCGGGCATGTTGCTCCTGCG CAGAAACACCCTGGCAGTTTACTGGAAGGGTTTAGCGGGGTTCAAGTTAGCACACTTTCA GTGAATGAGGGTTTATTGGTTGCTGGTGGTTTTCAGGGAGAACTAATTTGCAAGGTTGTG GGAGACCGTGATGTTAAGTTCTGCACAAGGACAACTTTAAGCGACAATGCTATCACAAAT GCGATAGATATACACAGATCTGCAAGTGGAAGCTTGCGTGTTACCGTGTCCAACAATGAT TGTGGTGTTCGTGAATTTGACATGGAAACATTTCAGCTCTTGAACCACTTCAGTTATAAC TGGCCAGTAAATCACACATCTGTGAGCCCTGATAGGAAACTTCTGGCAGTAGTTGGAGAT GATCGGGATGCTCTTCTTGTTGATTCAAGAAATGGAAAGGTAACCTCTACCCTAGTTGGC CATCTGGACTATTCGTTTGCTTCGGCATGGCACCCTGATGGCCGCACCTTCGCAACCGGT AACCAAGACAAGACCTGCCGCGTCTGGGACGTACGAAACCTGTCAACCTCCCTCTCAGTA CTTAGGGGCAACATTGGCGCTATCCGTTGCATCCGCTACTCCTCGGATGGCCAGTTCATG CTCTTCTCGGAGCCCGCTGACTTCGTGCACGTCTACAGCGCCGCTGCGGACTACAAGAAG AGGCAGGAGATAGATTTCTTCGGCGAGATCTCCGGCATCTCGCTTAGCCCAGACGACGAG TCACTGTTCGTCGGAGTGTGCGACCGTGTGTACGCCAGCTTGCTGCACTACAGAATGGTC CACTCCTTTGGATACCTCGACTCGTTCATGTAG

Peptide Sequence

PEP ID	Os06t0171900-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:3635515:3639434:1 gene:Os06g0171900 transcript:Os06t0171900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SALT RESPONSIVE WD40 PROTEIN 3 description:WD40 subfamily protein, Salt stress (Os06t0171900-01);Similar to GAMYB-binding protein (Fragment). (Os06t0171900-02)
Sequence	LWATSKHDVYFMSNSTVGHWSSLSHNLSEVLDFSGHVAPAQKHPGSLLEGFSGVQVSTLS VNEGLLVAGGFQGELICKVVGDRDVKFCTRTTLSDNAITNAIDIHRSASGSLRVTVSNND CGVREFDMETFQLLNHFSYNWPVNHTSVSPDRKLLAVVGDDRDALLVDSRNGKVTSTLVG HLDYSFASAWHPDGRTFATGNQDKTCRVWDVRNLSTSLSVLRGNIGAIRCIRYSSDGQFM LFSEPADFVHVYSAAADYKKRQEIDFFGEISGISLSPDDESLFVGVCDRVYASLLHYRMV HSFGYLDSFM

Transcript Sequence

Transcript ID	Os06t0171900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3635515:3639434:1 gene:Os06g0171900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SALT RESPONSIVE WD40 PROTEIN 3 description:WD40 subfamily protein, Salt stress (Os06t0171900-01);Similar to GAMYB-binding protein (Fragment). (Os06t0171900-02)
Sequence	TGTTATGGGCAACGTCGAAGCATGATGTCTACTTCATGTCAAATTCCACAGTAGGCCACT GGTCATCATTGTCTCACAATCTATCAGAGGTTCTTGATTTCTCCGGGCATGTTGCTCCTG CGCAGAAACACCCTGGCAGTTTACTGGAAGGGTTTAGCGGGGTTCAAGTTAGCACACTTT CAGTGAATGAGGGTTTATTGGTTGCTGGTGGTTTTCAGGGAGAACTAATTTGCAAGGTTG TGGGAGACCGTGATGTTAAGTTCTGCACAAGGACAACTTTAAGCGACAATGCTATCACAA ATGCGATAGATATACACAGATCTGCAAGTGGAAGCTTGCGTGTTACCGTGTCCAACAATG ATTGTGGTGTTCGTGAATTTGACATGGAAACATTTCAGCTCTTGAACCACTTCAGTTATA ACTGGCCAGTAAATCACACATCTGTGAGCCCTGATAGGAAACTTCTGGCAGTAGTTGGAG ATGATCGGGATGCTCTTCTTGTTGATTCAAGAAATGGAAAGGTAACCTCTACCCTAGTTG GCCATCTGGACTATTCGTTTGCTTCGGCATGGCACCCTGATGGCCGCACCTTCGCAACCG GTAACCAAGACAAGACCTGCCGCGTCTGGGACGTACGAAACCTGTCAACCTCCCTCTCAG TACTTAGGGGCAACATTGGCGCTATCCGTTGCATCCGCTACTCCTCGGATGGCCAGTTCA TGCTCTTCTCGGAGCCCGCTGACTTCGTGCACGTCTACAGCGCCGCTGCGGACTACAAGA AGAGGCAGGAGATAGATTTCTTCGGCGAGATCTCCGGCATCTCGCTTAGCCCAGACGACG AGTCACTGTTCGTCGGAGTGTGCGACCGTGTGTACGCCAGCTTGCTGCACTACAGAATGG TCCACTCCTTTGGATACCTCGACTCGTTCATGTAGAGAGGGAATAAAAGTGGTGTTTCTG TATGTGATAGGCCACCCATCTCGGTGGCGATTCTGATGTGCGTGTTCAGGGAATGTATCT GCCTGTTCAAGTGCATGTTTAGTCAAAGGCTCAAGCGTGCAGCGTGATCCTTGCCTTGTG AATAGTTAGCTAGTAAATCATAGACTGTATGGACCAATACTCTCTCTGGGCAATAATGCA GAAGTAATCTAT