Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0171800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:3598466:3605188:-1 gene:Os06g0171800 gene_biotype:protein_coding transcript_biotype:protein_coding description:VRR-NUC domain containing protein. (Os06t0171800-01)
Sequence	ATGCTGACCGGGCGGGAGAGCCTTGTCCGCCTCATCGGGCGGCGCCGCCGCTCCCCTCTC CCCGCCGCCCTCGCCCTCGCCGTGCCCCCCTCCCGCTCCCTTCAGGATGATGCGGCCGAT GCGGAGAGGGAAGCCGCGGCGGGTGGTTCTTCGTCGGGAGGGGGCGACGCCGCCGGCGCG GCGGGGTGGGTGGCGTGCCCCGTCTGCGGCGAGTCCATCCGCGGCACGGATTACTGCGTC AACACGCACCTCGATATATGCCTTACAAGAGGAACAAAACGGAAGTTAACTCAGAGCACC CTTCTTGATTTCAGTTTCAGTAGAAAAGCCACAGATGATTACGCTTTGAACAATTTGAAC ACCAGTGATGAGGCAGAGCATATGGAACCGACCGATGGAAATGTATCTAGCGATGGAGCT TTCTTCTCGTTGAATAATGACAAGGTCAATTCAAAGGGAAGTGCTAATGCTTCATCACCT GGCTGCCTGCATGGCTCTCCTGACATCTCGGAGACATGTGATACCTGTCTACCACCCAAT GTATTATTACCATATACAGAAAATACTGCAAACAATGGTGTAGTCAAGAAGTGCTTGTCC CACATGCCTTCAACTGATGCAACTTCGAGTACTATTGGTTTGCTTTCAGTGACAGATTCT AGCAATTCGGTAGTAGTTGACACTGTCATAGTGGGCAGGAGGTTCCATGAAAACATAGAA TTGCAAGAAGGTGCGAGCATTACTCTTCTCCGAGATCCTCAGAATGCAAAGGACCCTGAC GCTATCAAGGTGCTTTATGCAGGCTATGAATGTGAACAGATGCTTGGATACTTACCTCGA GAGCTGGCTAAAGTTTTGGCTCCTCTACTGGACAGACACTACATTGAATGCGAGGGATGT GTGGTTGGCGTGCCTGAACAACAACTTGATCATGTTCCCATCCAGCTTAAGTGCCAGAAA TATACAGATGAAAATGAGACATATGATGATCTGAAGCATCCACAGTTCTTATGGGAAAAT TTCATATGTGCTGTTGGAAATGGAAATTTGCTGCAACCTAGCAGTACGAGATACCAGACA AATTTTAGTTCGATGATAACAGATGTGATGGCAAACCATTCACACCTTTTTAGTGACAAG GAAAAGTCATTTTTAGACTCTTTTCAGTTGTTACCAGATGATGGACAAAGGCTCTTTGTT AGGATCTACACTCGAAAAGGGCCATGGTTTCGAATGAGCAGTATCTCATATCGTGAGATA TCAGATCTGGGGCAGGCAGCCATGGAACTTAAGTTGGCAGGTTATATTGACATGATATCC TGCATGGATGATCTATCTAACTATGATTTGAAGGAGGTTATTGACGTGCTAAGTGTTCCT GAAATGAAAGAAATTCTAAAAGAGCTCCAAAAGAATAACGTCAGCTGCACACGCCGACAT GAGCTTCTTAGCACCCTTCTGTATTTATATCGTAATGGAACCTGCACAATTCTACCAAAG CGAATTCTGAAGTGGACAGGAACATGCATAAGAACTTCTGATGTGGCTGATGAACTTCTG TGGCGTGTCCAGAGACTCTTTTTTCTAAATGGTGATCAAGATCTCTCATTCTTTCTGTTA GTGGATCTTGGTCTGGTGAGGTTTCCAGTCTATGCCTGCACCATTTCTCACCGCGTTTTT CAGGAAATAAGTGATCTACTACAGTATGAAGAGGCTATTCAAGTGGCACAGGTAATGGAT CAATCTCTTGATAATAGTAACATGGAAATGGTGACAAGATGCATTGAGTTATCTGAGAAT CGACTAAGCACAGCACCAAAAGAAGAAAATGCAACTAGGGCTGAACCTCCCCCATCATTC TTCTCACGTTTTTCAGCTTCCTCGGTCTATTCGAAGATACTTACGTTAGGTGTATCTGTT TATGAACGAGACCGTAGGTATACTGATGCAATAAGAGTTCTAAAGAGACTACTCAGTACT GTTGCTTCGGATAGAAAGCGAGGATATTGGGCTTTGAGACTATCTGTTGATTTGGAGCAC ATGAATCGTTCCAATGAGAGCCTGTCAATAGCTGAAGCAGGGGTAATTGATCCATGGGTC CGTGCTGGTTCAAAGATTGCACTGCAAAGGAGAGTTGTGCGTTTAAGCAAACCTCCACGG CGCTGGAAAGTTCCCAGTTATGCCAATGCTGTTACGACAAATATAAAAGAGGTAAATATA GAAGGAAGACCGTTAAATTGTGAAACAGGTGCAAAGAATGTATTTTACGGATACGATGGT GAGCTTTGTGGGGTAGAACAATTGGCTTTACAATATTACGCAGATGAAGGAGGGGGTTGG CGAGGTACCCATTCAGAAGGTGGCATTTGGATGACTATCTTTGGCCTTCTAATGTGGGAT GCAATATTTTCAGACGTACCAGATGTTTTCCAGACTAAATTTCAGACAGCCCCTCTGGAC CTGGAAACTGATGAATTCTACAGATCAAGAAAGGACCTTATAGAGTCCCAGCTGAAAAAG ATTCAAGATGGCATTGCTGAAGAGATTCTTATCAGCTCCTGGGAGCTACACCAGGGGACA TCCTGCAGGGGTGTTAACTGGGACCGGCATTCCTTGACAGATCTACGAGCTGCCGTCGTA TGCACCGGTGGCCATCGCTTGGCATCTCTGCTCCGGCATCTAGCCCTCGATTACAGAAGC TGGTCCAGTGGAATGCCTGATCTGCTGCTATGGCGTTTCCTTGATGAAAGAGGAGGCGGT GAAGCTAAACTTGTGGAGGTCAAAGGGCCAAGGGACCAGCTGTCTGAGCAACAGCGTGCC TGGATACTTGTTCTCATGGACTTTGGTTTTGATGTGGAAGTTTGCAAGGTAAGCCCAGTT TCTAAGAGGAGATAG

Peptide Sequence

PEP ID	Os06t0171800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:3598466:3605188:-1 gene:Os06g0171800 transcript:Os06t0171800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:VRR-NUC domain containing protein. (Os06t0171800-01)
Sequence	MLTGRESLVRLIGRRRRSPLPAALALAVPPSRSLQDDAADAEREAAAGGSSSGGGDAAGA AGWVACPVCGESIRGTDYCVNTHLDICLTRGTKRKLTQSTLLDFSFSRKATDDYALNNLN TSDEAEHMEPTDGNVSSDGAFFSLNNDKVNSKGSANASSPGCLHGSPDISETCDTCLPPN VLLPYTENTANNGVVKKCLSHMPSTDATSSTIGLLSVTDSSNSVVVDTVIVGRRFHENIE LQEGASITLLRDPQNAKDPDAIKVLYAGYECEQMLGYLPRELAKVLAPLLDRHYIECEGC VVGVPEQQLDHVPIQLKCQKYTDENETYDDLKHPQFLWENFICAVGNGNLLQPSSTRYQT NFSSMITDVMANHSHLFSDKEKSFLDSFQLLPDDGQRLFVRIYTRKGPWFRMSSISYREI SDLGQAAMELKLAGYIDMISCMDDLSNYDLKEVIDVLSVPEMKEILKELQKNNVSCTRRH ELLSTLLYLYRNGTCTILPKRILKWTGTCIRTSDVADELLWRVQRLFFLNGDQDLSFFLL VDLGLVRFPVYACTISHRVFQEISDLLQYEEAIQVAQVMDQSLDNSNMEMVTRCIELSEN RLSTAPKEENATRAEPPPSFFSRFSASSVYSKILTLGVSVYERDRRYTDAIRVLKRLLST VASDRKRGYWALRLSVDLEHMNRSNESLSIAEAGVIDPWVRAGSKIALQRRVVRLSKPPR RWKVPSYANAVTTNIKEVNIEGRPLNCETGAKNVFYGYDGELCGVEQLALQYYADEGGGW RGTHSEGGIWMTIFGLLMWDAIFSDVPDVFQTKFQTAPLDLETDEFYRSRKDLIESQLKK IQDGIAEEILISSWELHQGTSCRGVNWDRHSLTDLRAAVVCTGGHRLASLLRHLALDYRS WSSGMPDLLLWRFLDERGGGEAKLVEVKGPRDQLSEQQRAWILVLMDFGFDVEVCKVSPV SKRR

Transcript Sequence

Transcript ID	Os06t0171800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3598466:3605188:-1 gene:Os06g0171800 gene_biotype:protein_coding transcript_biotype:protein_coding description:VRR-NUC domain containing protein. (Os06t0171800-01)
Sequence	GCGCGCCGCGGCTCTCTCGACCACTTCCATTCCTTCCCGGGCTCGCCGCGCCGCCACCTC GTCTCCCCCGCGGCGGCGGCGAAGGAGGCCATGCTGACCGGGCGGGAGAGCCTTGTCCGC CTCATCGGGCGGCGCCGCCGCTCCCCTCTCCCCGCCGCCCTCGCCCTCGCCGTGCCCCCC TCCCGCTCCCTTCAGGATGATGCGGCCGATGCGGAGAGGGAAGCCGCGGCGGGTGGTTCT TCGTCGGGAGGGGGCGACGCCGCCGGCGCGGCGGGGTGGGTGGCGTGCCCCGTCTGCGGC GAGTCCATCCGCGGCACGGATTACTGCGTCAACACGCACCTCGATATATGCCTTACAAGA GGAACAAAACGGAAGTTAACTCAGAGCACCCTTCTTGATTTCAGTTTCAGTAGAAAAGCC ACAGATGATTACGCTTTGAACAATTTGAACACCAGTGATGAGGCAGAGCATATGGAACCG ACCGATGGAAATGTATCTAGCGATGGAGCTTTCTTCTCGTTGAATAATGACAAGGTCAAT TCAAAGGGAAGTGCTAATGCTTCATCACCTGGCTGCCTGCATGGCTCTCCTGACATCTCG GAGACATGTGATACCTGTCTACCACCCAATGTATTATTACCATATACAGAAAATACTGCA AACAATGGTGTAGTCAAGAAGTGCTTGTCCCACATGCCTTCAACTGATGCAACTTCGAGT ACTATTGGTTTGCTTTCAGTGACAGATTCTAGCAATTCGGTAGTAGTTGACACTGTCATA GTGGGCAGGAGGTTCCATGAAAACATAGAATTGCAAGAAGGTGCGAGCATTACTCTTCTC CGAGATCCTCAGAATGCAAAGGACCCTGACGCTATCAAGGTGCTTTATGCAGGCTATGAA TGTGAACAGATGCTTGGATACTTACCTCGAGAGCTGGCTAAAGTTTTGGCTCCTCTACTG GACAGACACTACATTGAATGCGAGGGATGTGTGGTTGGCGTGCCTGAACAACAACTTGAT CATGTTCCCATCCAGCTTAAGTGCCAGAAATATACAGATGAAAATGAGACATATGATGAT CTGAAGCATCCACAGTTCTTATGGGAAAATTTCATATGTGCTGTTGGAAATGGAAATTTG CTGCAACCTAGCAGTACGAGATACCAGACAAATTTTAGTTCGATGATAACAGATGTGATG GCAAACCATTCACACCTTTTTAGTGACAAGGAAAAGTCATTTTTAGACTCTTTTCAGTTG TTACCAGATGATGGACAAAGGCTCTTTGTTAGGATCTACACTCGAAAAGGGCCATGGTTT CGAATGAGCAGTATCTCATATCGTGAGATATCAGATCTGGGGCAGGCAGCCATGGAACTT AAGTTGGCAGGTTATATTGACATGATATCCTGCATGGATGATCTATCTAACTATGATTTG AAGGAGGTTATTGACGTGCTAAGTGTTCCTGAAATGAAAGAAATTCTAAAAGAGCTCCAA AAGAATAACGTCAGCTGCACACGCCGACATGAGCTTCTTAGCACCCTTCTGTATTTATAT CGTAATGGAACCTGCACAATTCTACCAAAGCGAATTCTGAAGTGGACAGGAACATGCATA AGAACTTCTGATGTGGCTGATGAACTTCTGTGGCGTGTCCAGAGACTCTTTTTTCTAAAT GGTGATCAAGATCTCTCATTCTTTCTGTTAGTGGATCTTGGTCTGGTGAGGTTTCCAGTC TATGCCTGCACCATTTCTCACCGCGTTTTTCAGGAAATAAGTGATCTACTACAGTATGAA GAGGCTATTCAAGTGGCACAGGTAATGGATCAATCTCTTGATAATAGTAACATGGAAATG GTGACAAGATGCATTGAGTTATCTGAGAATCGACTAAGCACAGCACCAAAAGAAGAAAAT GCAACTAGGGCTGAACCTCCCCCATCATTCTTCTCACGTTTTTCAGCTTCCTCGGTCTAT TCGAAGATACTTACGTTAGGTGTATCTGTTTATGAACGAGACCGTAGGTATACTGATGCA ATAAGAGTTCTAAAGAGACTACTCAGTACTGTTGCTTCGGATAGAAAGCGAGGATATTGG GCTTTGAGACTATCTGTTGATTTGGAGCACATGAATCGTTCCAATGAGAGCCTGTCAATA GCTGAAGCAGGGGTAATTGATCCATGGGTCCGTGCTGGTTCAAAGATTGCACTGCAAAGG AGAGTTGTGCGTTTAAGCAAACCTCCACGGCGCTGGAAAGTTCCCAGTTATGCCAATGCT GTTACGACAAATATAAAAGAGGTAAATATAGAAGGAAGACCGTTAAATTGTGAAACAGGT GCAAAGAATGTATTTTACGGATACGATGGTGAGCTTTGTGGGGTAGAACAATTGGCTTTA CAATATTACGCAGATGAAGGAGGGGGTTGGCGAGGTACCCATTCAGAAGGTGGCATTTGG ATGACTATCTTTGGCCTTCTAATGTGGGATGCAATATTTTCAGACGTACCAGATGTTTTC CAGACTAAATTTCAGACAGCCCCTCTGGACCTGGAAACTGATGAATTCTACAGATCAAGA AAGGACCTTATAGAGTCCCAGCTGAAAAAGATTCAAGATGGCATTGCTGAAGAGATTCTT ATCAGCTCCTGGGAGCTACACCAGGGGACATCCTGCAGGGGTGTTAACTGGGACCGGCAT TCCTTGACAGATCTACGAGCTGCCGTCGTATGCACCGGTGGCCATCGCTTGGCATCTCTG CTCCGGCATCTAGCCCTCGATTACAGAAGCTGGTCCAGTGGAATGCCTGATCTGCTGCTA TGGCGTTTCCTTGATGAAAGAGGAGGCGGTGAAGCTAAACTTGTGGAGGTCAAAGGGCCA AGGGACCAGCTGTCTGAGCAACAGCGTGCCTGGATACTTGTTCTCATGGACTTTGGTTTT GATGTGGAAGTTTGCAAGGTAAGCCCAGTTTCTAAGAGGAGATAGGATAGGTTCCTGAAT GTAAGTTATAACTGTGTAACAATTTCATTTTATTGACCATGAATGCATGAAGTATTCGAT TGATTAGAGGGCCAACAATTGTAACATGTAAAACCAATGTTGTTACAAATAATCTACTAG TAGATTTTACAAGAGCTGAAGGATGTG