Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0171700-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:3596001:3598291:1 gene:Os06g0171700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G1/S-phase gene CAK1, CDK-activating kinase assembly factor, MENAGE A TROIS 1, MAT1 assembly factor description:Cdk-activating kinase assembly factor (MAT1) family protein. (Os06t0171700-01)
Sequence	ATGGTGGTGGCATCCGGTGGAGGGCGGAACGCGTGGGCGAAGGAGATGACCATCCGCCGC AGGATTACCAGCATATTCAACAAGACGCGGGAGCATTTTCCGTCCCTGAAAGATTACAAC GACTATCTTGAGGAAGTCGAGGATATGACTTTCAACCTGATCGAGGGGATAGATGTCGAG GTGATTGAAGCTAAAATTGCCAGATATCAACAGGAAAATGCTGAACAGATATATTTGTCC CGGGCTAAAAGGGCCGAAGATCTTGCTGCCGCACTTAAAGCAAGCAGAATGAACCCTGGC AAGGCTGGTGCCAATGACACGGCTGCTGGAAGCTCTCAGGGCATTAGTAGTGGCGCGGGA GTTCAGGAAGGCCAGTATGCGCCTGCTGCTGTTCCCGGTGGGCTAGCTCAGCCTCGGCCA ACAGGGATGGCCCCTCAACCGATCGGCGGTTCATCGGTTCCTCTTCAAGGAGATGATGAG GAGACCATGAGGCTACGTGCGGAGAGCGGGGCTCGAGCTGGTGGATGGTCCATCGAAATG TGCAAGAGAAGAGCATTGCAGGAAGCGTTCAGTACCATATTCGTCTGA

Peptide Sequence

PEP ID	Os06t0171700-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:3596001:3598291:1 gene:Os06g0171700 transcript:Os06t0171700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G1/S-phase gene CAK1, CDK-activating kinase assembly factor, MENAGE A TROIS 1, MAT1 assembly factor description:Cdk-activating kinase assembly factor (MAT1) family protein. (Os06t0171700-01)
Sequence	MVVASGGGRNAWAKEMTIRRRITSIFNKTREHFPSLKDYNDYLEEVEDMTFNLIEGIDVE VIEAKIARYQQENAEQIYLSRAKRAEDLAAALKASRMNPGKAGANDTAAGSSQGISSGAG VQEGQYAPAAVPGGLAQPRPTGMAPQPIGGSSVPLQGDDEETMRLRAESGARAGGWSIEM CKRRALQEAFSTIFV

Transcript Sequence

Transcript ID	Os06t0171700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3596001:3598291:1 gene:Os06g0171700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G1/S-phase gene CAK1, CDK-activating kinase assembly factor, MENAGE A TROIS 1, MAT1 assembly factor description:Cdk-activating kinase assembly factor (MAT1) family protein. (Os06t0171700-01)
Sequence	AATTCTGGGCCTAGGCATCTCCCCTCTTCTCGGGCAAGAACCCTAGCCACCTTCGCCAGT CTCCGGCTCGAACGCGGCCACGGCGAGGCTGCGCGGCCAGTGATCTTGCGGTCTAGGCGG CGGCGGCGGAGGAGGAGGAGGAGGAGGAGGCGTCGAGATGGTGGTGGCATCCGGTGGAGG GCGGAACGCGTGGGCGAAGGAGATGACCATCCGCCGCAGGATTACCAGCATATTCAACAA GACGCGGGAGCATTTTCCGTCCCTGAAAGATTACAACGACTATCTTGAGGAAGTCGAGGA TATGACTTTCAACCTGATCGAGGGGATAGATGTCGAGGTGATTGAAGCTAAAATTGCCAG ATATCAACAGGAAAATGCTGAACAGATATATTTGTCCCGGGCTAAAAGGGCCGAAGATCT TGCTGCCGCACTTAAAGCAAGCAGAATGAACCCTGGCAAGGCTGGTGCCAATGACACGGC TGCTGGAAGCTCTCAGGGCATTAGTAGTGGCGCGGGAGTTCAGGAAGGCCAGTATGCGCC TGCTGCTGTTCCCGGTGGGCTAGCTCAGCCTCGGCCAACAGGGATGGCCCCTCAACCGAT CGGCGGTTCATCGGTTCCTCTTCAAGGAGATGATGAGGAGACCATGAGGCTACGTGCGGA GAGCGGGGCTCGAGCTGGTGGATGGTCCATCGAAATGTGCAAGAGAAGAGCATTGCAGGA AGCGTTCAGTACCATATTCGTCTGACGGTCAGATTAGACGCAAGAGCACCTAACATGTAG GATGCCTGATAATTTTGTGGACATCCTTTGGATGAGATGATGGGTTTTTACTGACCGATT GACATGGTTGGCTTGGTCCAAACATATGAATTTTGAGCACTTGGGATTGAAGCTCCAATC ATCGTCAAGTGGCCTGGTGATTGGAAAAGACCATCCCTTCTCATTCTCAGCAATCTGGAA AATTGTGCATTTCTGTTTTTGTTCATAGCATATGAATGGTGATTGGAAAAGACCATCCCT TCCCATTCTCAGCAATCTGGAAAATTGCGCATTTCTGCTTTTGTTCATAGCATATGAATG TTGTGTGCTTGCCTGACTAAATTATCAAAAGCATATTGTG