Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0167200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:3389074:3390445:-1 gene:Os06g0167200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os06t0167200-01)
Sequence	ATGATGGTCGCCGGAGTAATCAGGAGCAACCAGGATGGCGGCGGCGGCGGCGGGACGGTG TCCGGTGCGGCGAGGATTAGCCCGGCGGTGGTGTTCGTCCTGGTGATATTGGCTGTGGTG CTGTTCGTGTCCGGGTTGCTGCATCTTCTTGTCAGATTCTTGCTCAGGCGCGGCCGTGGG CGAGATGGCGGCGGCGGCGGCGACGCGGAGGCGGCGGAGGGTGTGGAGGAGTCGGCGTTG CAACGGCAGCTGCAGCAGCTGTTCCACCTGCACGACGCCGGGCTGGACCAGGACGTCATC GACGCGCTCCCGGTGTTCATGTACCGGGAGGTGGTGGTCGGCGTCGGCGGCGGCGGCGGC GCGGGCGGCGGAGCCAAGGAGCCGTTCGACTGCGCGGTCTGCCTGTGCGAGTTCGCCGGC GACGACCGGCTCCGGCTGCTGCCGGTGTGCGGCCACGCGTTCCACATCGACTGCATCGAC ACGTGGCTGCTCTCCAACTCCACGTGCCCGCTCTGCCGCGCCGCGCTCGGCGCCGACGCC GCCGCTCTGTTCGACGCCGCGTTCGACGAGATGGCCGACGAGGAGGACCGGAAGCAGCAG GAGGACGCCGTGTTCCCCGTCCGCCTCGGCAAGTTCAAGAACCTCTCCAGGGCGGTCGGC CCCGTCCACGACCGCGACGACGCCGCCGCCGCCGCCGCCGGCGTCGGCGTCGGCGGTGGC ATTATCACGCGAGAGGAAGGCGAGTCGAGCAGCAGCAGCTTGGACGCCAGGCGGTGCTTC TCCATGGGCTCCTACCAGTACGTCCTCGCCGAGGCGAGCTTGCAGGTGTCCGTACACCGG AGGCACGGCGACGGCAATGGCAGGGCGAGGCTGAGAGGGCTCGCCGGCGCCAACCCGGCC GGCAACGACGCCGCCGCCGCCGCCGACGGGAAGAAGATCGGCGCCGGCAGCAAGGGCGAC AGCTTCTCGGTGTCCAAGATTTGGCAGTGGCCGCGGCAAGGCAAGGGGAAGCTGCCGGTG CTCGCCTCCGACGACTCGCCGGCGGTGGACGGCCGGCTGCCGTGGCCGAGGAGAAGCCCC GGGGCTTCCTGA

Peptide Sequence

PEP ID	Os06t0167200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:3389074:3390445:-1 gene:Os06g0167200 transcript:Os06t0167200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os06t0167200-01)
Sequence	MMVAGVIRSNQDGGGGGGTVSGAARISPAVVFVLVILAVVLFVSGLLHLLVRFLLRRGRG RDGGGGGDAEAAEGVEESALQRQLQQLFHLHDAGLDQDVIDALPVFMYREVVVGVGGGGG AGGGAKEPFDCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCRAALGADA AALFDAAFDEMADEEDRKQQEDAVFPVRLGKFKNLSRAVGPVHDRDDAAAAAAGVGVGGG IITREEGESSSSSLDARRCFSMGSYQYVLAEASLQVSVHRRHGDGNGRARLRGLAGANPA GNDAAAAADGKKIGAGSKGDSFSVSKIWQWPRQGKGKLPVLASDDSPAVDGRLPWPRRSP GAS

Transcript Sequence

Transcript ID	Os06t0167200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3389074:3390445:-1 gene:Os06g0167200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os06t0167200-01)
Sequence	CCTTTGCTTTGGCCATTTTCTCAAGCACCTAATTTGCTTGGATCCTTCTTGCACTTGCAA CTTGCAAAACAACCAAAGGAAATACTAGTAGCATCATCAAGCGAAGAAGGTCAGCTCAAA AGGGCGTTGTGTGCTTCGCCTCGCGAAATGAGAGTCGCATTGCTCCGGAGATGATGGTCG CCGGAGTAATCAGGAGCAACCAGGATGGCGGCGGCGGCGGCGGGACGGTGTCCGGTGCGG CGAGGATTAGCCCGGCGGTGGTGTTCGTCCTGGTGATATTGGCTGTGGTGCTGTTCGTGT CCGGGTTGCTGCATCTTCTTGTCAGATTCTTGCTCAGGCGCGGCCGTGGGCGAGATGGCG GCGGCGGCGGCGACGCGGAGGCGGCGGAGGGTGTGGAGGAGTCGGCGTTGCAACGGCAGC TGCAGCAGCTGTTCCACCTGCACGACGCCGGGCTGGACCAGGACGTCATCGACGCGCTCC CGGTGTTCATGTACCGGGAGGTGGTGGTCGGCGTCGGCGGCGGCGGCGGCGCGGGCGGCG GAGCCAAGGAGCCGTTCGACTGCGCGGTCTGCCTGTGCGAGTTCGCCGGCGACGACCGGC TCCGGCTGCTGCCGGTGTGCGGCCACGCGTTCCACATCGACTGCATCGACACGTGGCTGC TCTCCAACTCCACGTGCCCGCTCTGCCGCGCCGCGCTCGGCGCCGACGCCGCCGCTCTGT TCGACGCCGCGTTCGACGAGATGGCCGACGAGGAGGACCGGAAGCAGCAGGAGGACGCCG TGTTCCCCGTCCGCCTCGGCAAGTTCAAGAACCTCTCCAGGGCGGTCGGCCCCGTCCACG ACCGCGACGACGCCGCCGCCGCCGCCGCCGGCGTCGGCGTCGGCGGTGGCATTATCACGC GAGAGGAAGGCGAGTCGAGCAGCAGCAGCTTGGACGCCAGGCGGTGCTTCTCCATGGGCT CCTACCAGTACGTCCTCGCCGAGGCGAGCTTGCAGGTGTCCGTACACCGGAGGCACGGCG ACGGCAATGGCAGGGCGAGGCTGAGAGGGCTCGCCGGCGCCAACCCGGCCGGCAACGACG CCGCCGCCGCCGCCGACGGGAAGAAGATCGGCGCCGGCAGCAAGGGCGACAGCTTCTCGG TGTCCAAGATTTGGCAGTGGCCGCGGCAAGGCAAGGGGAAGCTGCCGGTGCTCGCCTCCG ACGACTCGCCGGCGGTGGACGGCCGGCTGCCGTGGCCGAGGAGAAGCCCCGGGGCTTCCT GATGCTGATTTCCATGGTGTGTTTGCAATTTGCAAAACTTTTTCAGAGCTAATTCTGCTC ATCTTTTTAACACCGTATTAATCAATCTGTTCATAGCCAATTCGTTCCATTC