Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0164900-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:3286611:3296253:-1 gene:Os06g0164900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0147J19.7 protein. (Os06t0164900-00)
Sequence	ATGGGCACAATCTTGATACATATAATAACATATGTACCAGTTTCCCTTGCATTCCATGGA AAGCAGTTGCTTGCCGTGGCCATGAGAGGCGTCAGCATTTTCACCACATCGATCTCCTTC CTTCTCGCGCTCACCATTGCTCTTGCAGAAGATCAGAGAAGCTCCCTTGCAAGGGGTTCC TCAATCTCCACCCAAGATGACACCACCACCATCCTTGTGTCCCCCAATGGCCACTTCTCA TGTGGCTTCTACAAGGTGGCCACCAACGCCTTCACCTTCTCCATCTGGTTCTCCAGGTCG TCGGAGAAGACCGTCGCGTGGACGGCGAACCGCGACGCTCCGGTGAACGGCAAGGGCTCC AAGCTCACCTTCCGGAAGGACGGGAGCCTGGCCCTTGTTGATTACAACGGCACGGTTGTG TGGAGCACCAACACCACGGCCACTGGCGCTAGCCGTGCAGAGCTTGACGACAGCGGCAAC CTCGTCGTCATGGATCCAGCCGGTCATCGCCTCTGGAAGAGCTTCGATTCACCGACCGAC ACGCTCCTCCCATTGCAGCCGATGACTCGAGATACAAAGCTGGTATCTGCATCTGCCAGG GGCTTGCCTTACTCAGGCTTGTACACCTTCTTCTTTGACAGTAACAACATATTGAGTATC ATATACAATGGCCCTAAGACTAGCAGCATATATTGGCCTAATCCTTATGAGCGGTCGTGG GAGAATGGTAGGACTACTTATAACAGCAGCCAATATGGGATTCTCAATCAGGAAGGCATG TTCTTAGCTAGTTATTTTGTATCAAGTGACCTTTTTAAGTTTGAAGCCTCTGATCTTGGC GATCATGTCATGAGGAGGTTGACACTGGATTACGATGGAAATCTTAGGCTGTACAGCCTA AACGAGACCAGTGGCAACTGGTCAGTTTCTTGGATGGCATTCTCTAGAGTATGTCAAATG CATGGAGTGTGTGGCACAAACGCTGTCTGCAATTACATCCCGGAACTCCATTGTTCTTGC CTCCAAGGCTTCGAGGTGATTGATCCGACTGACTGGAGCAAAGGATGCAAGCGCAAGGTG GACATAACAGCAATCTGGGATAAAGGGAATAGACATAATATTACAAACAACTCTACCAGC CAGGACTTCTCAATCAGAAAGATCACTGCAACTGACTTCTGGGGGTATGACACCGCCTAC ACACAGTTAATACCATACTCAAACTGTAGAAATATGTGCCTCACCGCCAATAACTGTCAA GCCTTCGGCTACCGGAAGGGAACTGGTGAATCTTATCCAAAGTACTCTCTTTTCAATGGC TGGCGCTTCCCAGATCCTTACAATGACCTCTATCTGAAAGTTCCCAAGGGGGTGCCGTTT CGCGAAGAATCAGATTCTAGACCAACCCATTCTTGTGGAGTTACAGAAAAGTTAGCCTAC CCTTCATCACAAATGTTTGAGGAAGTCACTTCCAATTTCGAGTTTGGTTACTTCCTTTCT TCTGTGTTAACGTTGCTTTTGATTGAAGTGGTTTTAATCATTGTTGGGTTTTCAGTTGTT AGAAAATGGGAGACAAGGCCTGAGATTACCGATGAAGGTTACGCAATCATTTCTAGTCAG TTCCGAAGATTCAGCTACAAGGAGTTACAAAAGGCAACCAATTGTTTTCAGGAAGAGCTG GGAAGTGGTGGATCGGGTGTGGTTTACAAGGGAGTCCTCGATGATGAAAGGAAGGTTGCA GTGAAAATTTTAAATGATGTGATCTATGGAGAGCAGGAGTTAAGGTCTGAGCTAAGTGTC ATAGGAAGAATATATCATATGAATCTGGTTAGAATTTGGGGGTTTTGTGTGGAGAAGACA AAGAGGCTCTTGGTTTCTGAGTACAGTGAGAACGGTTCTTTAGACAGACTTCTGTTTGAC TACCACAACTTATTTCCTGTCCTAAAATGGAGCCAAAGGTACAATATTGCACTTGGAGTG GCAAAAGGACTGGCATATCTTCACCATGAGTGTCTTGAATGGATCGTGCACTGCGATATC AAACCGGAAAACATATTGTTAGATAAAGACTTTGAGCCAAAGATTGCAGATTTTGGACTG GTGAAACTACTTAAGCCAGAAGCAGCACAAATGCCGTCAAGAGTGCATGGAACTAGAGGG TATATTGCACCAGAATGGGCTCTAAATCTTCCAATCACTGGCAAGGCTGATGTTTACAGC TATGGAGTAGTACTTCTTGAGTTAGTGAAGGGGAGTCGGGTTTCCAGATGGGTGGTTGAT GGCAAGGAGGAGGTAGGTCTGGCTGTTAAACGCAATGTTGACACTCTTAGAGAGAAACTA GCTAGCGAAGATCAATCATGGCTGCTGGAATTTGTTGACAGCAGGCTGGATGGAGAATTC AACTATTCACAGGCGGCCACAGTACTAAAGATAGCAGTGTTATGTCTGGAAGAAGATAGG CGCATGAGACCAAGCATGGATACTGTGGTTGAAGTCCTGCTTTCGCTTGTGGAATAA

Peptide Sequence

PEP ID	Os06t0164900-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:3286611:3296253:-1 gene:Os06g0164900 transcript:Os06t0164900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0147J19.7 protein. (Os06t0164900-00)
Sequence	MGTILIHIITYVPVSLAFHGKQLLAVAMRGVSIFTTSISFLLALTIALAEDQRSSLARGS SISTQDDTTTILVSPNGHFSCGFYKVATNAFTFSIWFSRSSEKTVAWTANRDAPVNGKGS KLTFRKDGSLALVDYNGTVVWSTNTTATGASRAELDDSGNLVVMDPAGHRLWKSFDSPTD TLLPLQPMTRDTKLVSASARGLPYSGLYTFFFDSNNILSIIYNGPKTSSIYWPNPYERSW ENGRTTYNSSQYGILNQEGMFLASYFVSSDLFKFEASDLGDHVMRRLTLDYDGNLRLYSL NETSGNWSVSWMAFSRVCQMHGVCGTNAVCNYIPELHCSCLQGFEVIDPTDWSKGCKRKV DITAIWDKGNRHNITNNSTSQDFSIRKITATDFWGYDTAYTQLIPYSNCRNMCLTANNCQ AFGYRKGTGESYPKYSLFNGWRFPDPYNDLYLKVPKGVPFREESDSRPTHSCGVTEKLAY PSSQMFEEVTSNFEFGYFLSSVLTLLLIEVVLIIVGFSVVRKWETRPEITDEGYAIISSQ FRRFSYKELQKATNCFQEELGSGGSGVVYKGVLDDERKVAVKILNDVIYGEQELRSELSV IGRIYHMNLVRIWGFCVEKTKRLLVSEYSENGSLDRLLFDYHNLFPVLKWSQRYNIALGV AKGLAYLHHECLEWIVHCDIKPENILLDKDFEPKIADFGLVKLLKPEAAQMPSRVHGTRG YIAPEWALNLPITGKADVYSYGVVLLELVKGSRVSRWVVDGKEEVGLAVKRNVDTLREKL ASEDQSWLLEFVDSRLDGEFNYSQAATVLKIAVLCLEEDRRMRPSMDTVVEVLLSLVE

Transcript Sequence

Transcript ID	Os06t0164900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3286611:3296253:-1 gene:Os06g0164900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0147J19.7 protein. (Os06t0164900-00)
Sequence	ATGGGCACAATCTTGATACATATAATAACATATGTACCAGTTTCCCTTGCATTCCATGGA AAGCAGTTGCTTGCCGTGGCCATGAGAGGCGTCAGCATTTTCACCACATCGATCTCCTTC CTTCTCGCGCTCACCATTGCTCTTGCAGAAGATCAGAGAAGCTCCCTTGCAAGGGGTTCC TCAATCTCCACCCAAGATGACACCACCACCATCCTTGTGTCCCCCAATGGCCACTTCTCA TGTGGCTTCTACAAGGTGGCCACCAACGCCTTCACCTTCTCCATCTGGTTCTCCAGGTCG TCGGAGAAGACCGTCGCGTGGACGGCGAACCGCGACGCTCCGGTGAACGGCAAGGGCTCC AAGCTCACCTTCCGGAAGGACGGGAGCCTGGCCCTTGTTGATTACAACGGCACGGTTGTG TGGAGCACCAACACCACGGCCACTGGCGCTAGCCGTGCAGAGCTTGACGACAGCGGCAAC CTCGTCGTCATGGATCCAGCCGGTCATCGCCTCTGGAAGAGCTTCGATTCACCGACCGAC ACGCTCCTCCCATTGCAGCCGATGACTCGAGATACAAAGCTGGTATCTGCATCTGCCAGG GGCTTGCCTTACTCAGGCTTGTACACCTTCTTCTTTGACAGTAACAACATATTGAGTATC ATATACAATGGCCCTAAGACTAGCAGCATATATTGGCCTAATCCTTATGAGCGGTCGTGG GAGAATGGTAGGACTACTTATAACAGCAGCCAATATGGGATTCTCAATCAGGAAGGCATG TTCTTAGCTAGTTATTTTGTATCAAGTGACCTTTTTAAGTTTGAAGCCTCTGATCTTGGC GATCATGTCATGAGGAGGTTGACACTGGATTACGATGGAAATCTTAGGCTGTACAGCCTA AACGAGACCAGTGGCAACTGGTCAGTTTCTTGGATGGCATTCTCTAGAGTATGTCAAATG CATGGAGTGTGTGGCACAAACGCTGTCTGCAATTACATCCCGGAACTCCATTGTTCTTGC CTCCAAGGCTTCGAGGTGATTGATCCGACTGACTGGAGCAAAGGATGCAAGCGCAAGGTG GACATAACAGCAATCTGGGATAAAGGGAATAGACATAATATTACAAACAACTCTACCAGC CAGGACTTCTCAATCAGAAAGATCACTGCAACTGACTTCTGGGGGTATGACACCGCCTAC ACACAGTTAATACCATACTCAAACTGTAGAAATATGTGCCTCACCGCCAATAACTGTCAA GCCTTCGGCTACCGGAAGGGAACTGGTGAATCTTATCCAAAGTACTCTCTTTTCAATGGC TGGCGCTTCCCAGATCCTTACAATGACCTCTATCTGAAAGTTCCCAAGGGGGTGCCGTTT CGCGAAGAATCAGATTCTAGACCAACCCATTCTTGTGGAGTTACAGAAAAGTTAGCCTAC CCTTCATCACAAATGTTTGAGGAAGTCACTTCCAATTTCGAGTTTGGTTACTTCCTTTCT TCTGTGTTAACGTTGCTTTTGATTGAAGTGGTTTTAATCATTGTTGGGTTTTCAGTTGTT AGAAAATGGGAGACAAGGCCTGAGATTACCGATGAAGGTTACGCAATCATTTCTAGTCAG TTCCGAAGATTCAGCTACAAGGAGTTACAAAAGGCAACCAATTGTTTTCAGGAAGAGCTG GGAAGTGGTGGATCGGGTGTGGTTTACAAGGGAGTCCTCGATGATGAAAGGAAGGTTGCA GTGAAAATTTTAAATGATGTGATCTATGGAGAGCAGGAGTTAAGGTCTGAGCTAAGTGTC ATAGGAAGAATATATCATATGAATCTGGTTAGAATTTGGGGGTTTTGTGTGGAGAAGACA AAGAGGCTCTTGGTTTCTGAGTACAGTGAGAACGGTTCTTTAGACAGACTTCTGTTTGAC TACCACAACTTATTTCCTGTCCTAAAATGGAGCCAAAGGTACAATATTGCACTTGGAGTG GCAAAAGGACTGGCATATCTTCACCATGAGTGTCTTGAATGGATCGTGCACTGCGATATC AAACCGGAAAACATATTGTTAGATAAAGACTTTGAGCCAAAGATTGCAGATTTTGGACTG GTGAAACTACTTAAGCCAGAAGCAGCACAAATGCCGTCAAGAGTGCATGGAACTAGAGGG TATATTGCACCAGAATGGGCTCTAAATCTTCCAATCACTGGCAAGGCTGATGTTTACAGC TATGGAGTAGTACTTCTTGAGTTAGTGAAGGGGAGTCGGGTTTCCAGATGGGTGGTTGAT GGCAAGGAGGAGGTAGGTCTGGCTGTTAAACGCAATGTTGACACTCTTAGAGAGAAACTA GCTAGCGAAGATCAATCATGGCTGCTGGAATTTGTTGACAGCAGGCTGGATGGAGAATTC AACTATTCACAGGCGGCCACAGTACTAAAGATAGCAGTGTTATGTCTGGAAGAAGATAGG CGCATGAGACCAAGCATGGATACTGTGGTTGAAGTCCTGCTTTCGCTTGTGGAATAATGT CCACTACTGTGATTGCTGCATTTCTATCTATTGTGAGAAAATGATAAGGTATGTTGTTGC A