Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0160700-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:3079296:3086808:-1 gene:Os06g0160700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SOLUBLE STARCH SYNTHASE I description:Starch synthase, Starch biosynthesis (Os06t0160700-01)
Sequence	ATGGCGACGGCGGCGGGGATGGGGATCGGGGCGGCGTGCCTGGTGGCGCCGCAGGTGAGG CCGGGGAGGAGGTTGCGGCTCCAGCGGGTGCGGAGGCGGTGCGTGGCGGAGCTGAGCAGG GACGGTGGGTCGGCGCAGCGCCCGCTGGCACCGGCGCCGCTGGTGAAGCAGCCGGTCCTG CCGACCTTCCTCGTGCCGACGTCGACGCCACCCGCGCCCACGCAGTCGCCGGCGCCGGCG CCGACCCCGCCGCCGTTGCCGGACTCCGGCGTGGGGGAGATCGAGCCCGATCTAGAAGGT CTCACAGAAGATTCCATCGACAAAACAATTTTTGTGGCTAGTGAGCAGGAGTCTGAGATC ATGGATGTGAAGGAGCAAGCTCAAGCTAAAGTAACACGCAGCGTTGTCTTTGTAACCGGT GAAGCTTCTCCTTATGCAAAGTCAGGTGGACTAGGAGATGTTTGTGGTTCACTGCCAATT GCTCTTGCTCTTCGTGGTCATCGTGTGATGGTTGTAATGCCGAGATACATGAACGGGGCC TTGAACAAAAATTTTGCAAACGCATTTTACACTGAGAAGCACATTAAGATTCCATGCTTT GGCGGAGAACATGAAGTTACTTTTTTTCACGAGTATAGGGATTCTGTTGATTGGGTGTTT GTTGATCATCCCTCATATCATAGACCTGGAAATTTGTATGGAGATAATTTTGGTGCTTTT GGCGATAATCAGTTCAGATACACACTCCTGTGCTATGCGGCGTGTGAAGCCCCATTAATT CTTGAACTGGGAGGATATATCTATGGACAGAAATGCATGTTTGTTGTGAATGATTGGCAT GCCAGTCTTGTGCCAGTCCTTCTTGCTGCAAAATATAGACCATATGGTGTTTACAGGGAT GCCCGCAGTGTTCTTGTCATACATAATCTAGCACATCAGGGTGTGGAGCCTGCCAGTACA TATCCTGACCTGGGATTGCCACCTGAATGGTATGGAGCATTAGAATGGGTGTTTCCAGAG TGGGCAAGGCGGCATGCCCTTGACAAGGGTGAGGCAGTCAATTTTTTAAAAGGCGCAGTT GTGACAGCAGATCGAATTGTGACTGTCAGCCAGGGGTATTCATGGGAGGTCACAACTGCT GAAGGTGGGCAAGGCCTCAATGAGCTCTTAAGCTCCCGGAAGAGTGTATTGAATGGAATT GTAAATGGAATTGACATTAATGATTGGAACCCATCCACAGACAAGTTTCTCCCTTATCAT TATTCTGTTGATGACCTGTCCGGAAAGGCCAAGTGTAAAGCTGAATTGCAGAAGGAGCTG GGTTTACCTATAAGGCCCGATGTGCCTCTGATTGGCTTTATTGGAAGATTGGACTATCAA AAAGGCATTGATCTAATTAAACTTGCCATTCCAGATCTCATGCGGGACAATATTCAATTC GTCATGCTTGGATCTGGTGACCCAGGTTTTGAAGGATGGATGAGATCCACAGAATCAGGG TACAGGGATAAATTTCGTGGATGGGTTGGATTTAGTGTTCCAGTTTCCCACCGAATAACT GCAGGTTGCGATATATTGTTGATGCCATCCAGATTCGAACCTTGTGGCCTCAATCAGCTA TATGCTATGCAATATGGTACAGTGCCTGTTGTTCATGGAACTGGAGGCCTCAGAGATACA GTGGAGAATTTTAACCCGTTTGCTGAGAAAGGAGAGCAGGGTACAGGGTGGGCATTCTCG CCACTAACCATTGAAAAAATGCTGTGGGCATTGCGGATGGCAATTTCGACATACAGGGAA CACAAGTCCTCTTGGGAGGGTCTAATGAAGCGAGGCATGTCAAGCGACTTTACATGGGAC CATGCCGCCTCACAGTATGAACAGATCTTCGAATGGGCCTTCATGGATCAACCATATGTC ATGTAA

Peptide Sequence

PEP ID	Os06t0160700-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:3079296:3086808:-1 gene:Os06g0160700 transcript:Os06t0160700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SOLUBLE STARCH SYNTHASE I description:Starch synthase, Starch biosynthesis (Os06t0160700-01)
Sequence	MATAAGMGIGAACLVAPQVRPGRRLRLQRVRRRCVAELSRDGGSAQRPLAPAPLVKQPVL PTFLVPTSTPPAPTQSPAPAPTPPPLPDSGVGEIEPDLEGLTEDSIDKTIFVASEQESEI MDVKEQAQAKVTRSVVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRYMNGA LNKNFANAFYTEKHIKIPCFGGEHEVTFFHEYRDSVDWVFVDHPSYHRPGNLYGDNFGAF GDNQFRYTLLCYAACEAPLILELGGYIYGQKCMFVVNDWHASLVPVLLAAKYRPYGVYRD ARSVLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAV VTADRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYH YSVDDLSGKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQF VMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQL YAMQYGTVPVVHGTGGLRDTVENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTYRE HKSSWEGLMKRGMSSDFTWDHAASQYEQIFEWAFMDQPYVM

Transcript Sequence

Transcript ID	Os06t0160700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:3079296:3086808:-1 gene:Os06g0160700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SOLUBLE STARCH SYNTHASE I description:Starch synthase, Starch biosynthesis (Os06t0160700-01)
Sequence	GTGCCCCACCGCCTCAGCGCCTCTCCCTCGCTTAAAACCAAACCCACACACCCACCTCTT CTCTCTCTCTCATCGTCTCCGCGACTCAGCCCACTCCTCTCTCTCCACCACCACCACCAC CACCACCACCGCCCGCCAAGCGCGGCCCGCCCGACACAGCAGCAGCAGGATCGGCGGAGA GGAGGGGGGATCATGGCGACGGCGGCGGGGATGGGGATCGGGGCGGCGTGCCTGGTGGCG CCGCAGGTGAGGCCGGGGAGGAGGTTGCGGCTCCAGCGGGTGCGGAGGCGGTGCGTGGCG GAGCTGAGCAGGGACGGTGGGTCGGCGCAGCGCCCGCTGGCACCGGCGCCGCTGGTGAAG CAGCCGGTCCTGCCGACCTTCCTCGTGCCGACGTCGACGCCACCCGCGCCCACGCAGTCG CCGGCGCCGGCGCCGACCCCGCCGCCGTTGCCGGACTCCGGCGTGGGGGAGATCGAGCCC GATCTAGAAGGTCTCACAGAAGATTCCATCGACAAAACAATTTTTGTGGCTAGTGAGCAG GAGTCTGAGATCATGGATGTGAAGGAGCAAGCTCAAGCTAAAGTAACACGCAGCGTTGTC TTTGTAACCGGTGAAGCTTCTCCTTATGCAAAGTCAGGTGGACTAGGAGATGTTTGTGGT TCACTGCCAATTGCTCTTGCTCTTCGTGGTCATCGTGTGATGGTTGTAATGCCGAGATAC ATGAACGGGGCCTTGAACAAAAATTTTGCAAACGCATTTTACACTGAGAAGCACATTAAG ATTCCATGCTTTGGCGGAGAACATGAAGTTACTTTTTTTCACGAGTATAGGGATTCTGTT GATTGGGTGTTTGTTGATCATCCCTCATATCATAGACCTGGAAATTTGTATGGAGATAAT TTTGGTGCTTTTGGCGATAATCAGTTCAGATACACACTCCTGTGCTATGCGGCGTGTGAA GCCCCATTAATTCTTGAACTGGGAGGATATATCTATGGACAGAAATGCATGTTTGTTGTG AATGATTGGCATGCCAGTCTTGTGCCAGTCCTTCTTGCTGCAAAATATAGACCATATGGT GTTTACAGGGATGCCCGCAGTGTTCTTGTCATACATAATCTAGCACATCAGGGTGTGGAG CCTGCCAGTACATATCCTGACCTGGGATTGCCACCTGAATGGTATGGAGCATTAGAATGG GTGTTTCCAGAGTGGGCAAGGCGGCATGCCCTTGACAAGGGTGAGGCAGTCAATTTTTTA AAAGGCGCAGTTGTGACAGCAGATCGAATTGTGACTGTCAGCCAGGGGTATTCATGGGAG GTCACAACTGCTGAAGGTGGGCAAGGCCTCAATGAGCTCTTAAGCTCCCGGAAGAGTGTA TTGAATGGAATTGTAAATGGAATTGACATTAATGATTGGAACCCATCCACAGACAAGTTT CTCCCTTATCATTATTCTGTTGATGACCTGTCCGGAAAGGCCAAGTGTAAAGCTGAATTG CAGAAGGAGCTGGGTTTACCTATAAGGCCCGATGTGCCTCTGATTGGCTTTATTGGAAGA TTGGACTATCAAAAAGGCATTGATCTAATTAAACTTGCCATTCCAGATCTCATGCGGGAC AATATTCAATTCGTCATGCTTGGATCTGGTGACCCAGGTTTTGAAGGATGGATGAGATCC ACAGAATCAGGGTACAGGGATAAATTTCGTGGATGGGTTGGATTTAGTGTTCCAGTTTCC CACCGAATAACTGCAGGTTGCGATATATTGTTGATGCCATCCAGATTCGAACCTTGTGGC CTCAATCAGCTATATGCTATGCAATATGGTACAGTGCCTGTTGTTCATGGAACTGGAGGC CTCAGAGATACAGTGGAGAATTTTAACCCGTTTGCTGAGAAAGGAGAGCAGGGTACAGGG TGGGCATTCTCGCCACTAACCATTGAAAAAATGCTGTGGGCATTGCGGATGGCAATTTCG ACATACAGGGAACACAAGTCCTCTTGGGAGGGTCTAATGAAGCGAGGCATGTCAAGCGAC TTTACATGGGACCATGCCGCCTCACAGTATGAACAGATCTTCGAATGGGCCTTCATGGAT CAACCATATGTCATGTAAATGGATTTGAAGGAAGCAGCGAATTTCTCCGAGGACCCTCAA TCTTCCTGTCTTTCATGAGCGGAATGAAAACTTTGTACACTACATGGAAAGGGAACCAGT TATGCAAAGTTGCAAACGATCACTCAAGGTTACCCTTGTAGGCCTGCTACTTGGCCAATA TGGTTCCAGTGACCATATGCAGAGTCAGGTTCAGATGAATGGCACTTGTGAGTAGTGAAG AATAAGATGAGGATGCTTGAAGCGGTTTCACATGTGGCTGATACCACGCAAGCAACCTCT CAATGCATCGAAATGTGAGTCTTGGAATCAATAGGATTTAGCTCCCATCAATTACAGTTG TACCCTTTTTTGCTTAATACTTTGTCGCCTGTGCTGTTCTTATATTTGTGTGAAGATAAA TTTTAGTCCATTAGGTAACTGTATTGTTGAGTCTTAAGGTGAAGACTAAATAGTGTTTGG AAGCTGTAGCTACTGCGATGTCAAGTGTCAAAAGAGATCTTGG