Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0158600-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:2992144:2995594:-1 gene:Os06g0158600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF652 family protein. (Os06t0158600-01)
Sequence

ATGGGGAGGGCGAAGAGCAAGGGCCCTAAGTTCGCCGCCGTCAAGAAGATCATCACCAAG
AAGACCATCCAGAAGTACAAGGAGGATGTGTTGAACCCCAAGAAGAAGGATAACGAGAAG
GAGAAGCTCGGGCGGAATGTGCCTCAGGTCTCTTCGGCGCTGTTCTTCAGCTACAACACA
GCGCTCGGGCCGCCATACCGGGTTATTGTGGATACAAACTTCATCAATTTCTCCATCCAG
AACAAGTTGGATTTGGAGAAAGGAATGATGGACTGCCTTTATGCAAAATGCACACCATGT
ATCACGGATTGTGTTATGGCGGAGCTTGAAAAGCTGGGACAAAAGTATCGTGTAGCATTG
AGAATTGCAAAGGACCCTAGGTTCCAGAGATTAGCATGCACACACAAGGGAACTTATGCT
GATGACTGTATCGTAGAGAGGGTTACTCAGCACAAGTGCTACATCGTCGCAACATGTGAT
AGAGATTTGAAAAGGAGGATAAGAAAGGTTCCTGGTGTTCCAATCATGTATATCACTCGG
CACAGGTACTCGATAGAACGACTCCCTGAAGCTACAATCGGAGGAGCACCAAGAATCTGA

Peptide Sequence

PEP ID

Os06t0158600-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:2992144:2995594:-1 gene:Os06g0158600 transcript:Os06t0158600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF652 family protein. (Os06t0158600-01)
Sequence

MGRAKSKGPKFAAVKKIITKKTIQKYKEDVLNPKKKDNEKEKLGRNVPQVSSALFFSYNT
ALGPPYRVIVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVAL
RIAKDPRFQRLACTHKGTYADDCIVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITR
HRYSIERLPEATIGGAPRI

Transcript Sequence

Transcript ID

Os06t0158600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2992144:2995594:-1 gene:Os06g0158600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF652 family protein. (Os06t0158600-01)
Sequence

ACTCTCCTCGAACGCGCGACGCCGCCGCCAGAGTCTCCGGCTCGCCGCACTTCCCGCCTC
GCCGTCGCCGTCGCCGTCGCCGTCGCCCCTCCCGCCGGTAGGAGAAGGTAGCTCGGCGCC
TCGGTGACTTGGCGTCGCGCTCTGCGCCCCTGCCGCTCTCGGTCGGTAGGCTCTCGTCTC
ACGCGGCCCCTTCCACCGCTTCACGCCGCCGGCAGTGAGCAGTCAGCTGCGAGGACCCGC
TCCACCGAGAGAGCTAACGCCGCCGCCGCCCGCGGTGCGCGTAGTGCTCGAGACTGCTGC
TGGTGTTGATAGTGTTATCTGGGATTTTTAGTCTGAGGATGGGGAGGGCGAAGAGCAAGG
GCCCTAAGTTCGCCGCCGTCAAGAAGATCATCACCAAGAAGACCATCCAGAAGTACAAGG
AGGATGTGTTGAACCCCAAGAAGAAGGATAACGAGAAGGAGAAGCTCGGGCGGAATGTGC
CTCAGGTCTCTTCGGCGCTGTTCTTCAGCTACAACACAGCGCTCGGGCCGCCATACCGGG
TTATTGTGGATACAAACTTCATCAATTTCTCCATCCAGAACAAGTTGGATTTGGAGAAAG
GAATGATGGACTGCCTTTATGCAAAATGCACACCATGTATCACGGATTGTGTTATGGCGG
AGCTTGAAAAGCTGGGACAAAAGTATCGTGTAGCATTGAGAATTGCAAAGGACCCTAGGT
TCCAGAGATTAGCATGCACACACAAGGGAACTTATGCTGATGACTGTATCGTAGAGAGGG
TTACTCAGCACAAGTGCTACATCGTCGCAACATGTGATAGAGATTTGAAAAGGAGGATAA
GAAAGGTTCCTGGTGTTCCAATCATGTATATCACTCGGCACAGGTACTCGATAGAACGAC
TCCCTGAAGCTACAATCGGAGGAGCACCAAGAATCTGATCGGCACGGACATAAAAAATGG
GGAATGTTTCACTGTTCAACTTGCTGGCCAAGAATACTGCTGTAGTAGCCTTTTGAAACA
AATGCTGTAGTGAGCTGTGCTAATTGTAACCACTTCAAAGTTTTGTACCAACCTCATGAG
GATATTACTGTTATCGAGATCCAAGAGATGTGTTTGCTTCC