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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0157500-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:2926823:2928474:1 gene:Os06g0157500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE FLOWERING-LOCUS T 1 description:Florigen, Flowering time, Long-day promotion (Os06t0157500-01)
Sequence

ATGGCCGGCAGCGGCAGGGACGATCCTCTTGTGGTTGGCAGGATTGTGGGTGATGTGCTG
GATCCATTCGTCCGGATCACTAACCTCAGTGTCAGCTATGGTGCAAGGATCGTCTCCAAT
GGCTGCGAGCTCAAGCCGTCCATGGTGACCCAACAGCCCAGGGTCGTGGTCGGTGGCAAT
GACATGAGGACGTTCTACACACTCGTGATGGTAGACCCGGATGCTCCGAGCCCAAGCAAC
CCTAACCTTAGGGAGTATCTACACTGGCTGGTCACCGATATTCCTGGTACCACTGGAGCA
ACATTTGGGCAAGAGGTGATGTGCTACGAGAGCCCAAGGCCAACCATGGGGATCCACCGG
CTGGTGTTCGTGCTGTTCCAGCAGCTGGGGCGTCAGACGGTGTACGCACCGGGGTGGCGC
CAGAACTTCAGCACCAGGAACTTCGCCGAGCTCTACAACCTCGGCTCGCCGGTCGCCACC
GTCTACTTCAACTGCCAGCGCGAGGCCGGCTCCGGCGGCAGGAGGGTCTACCCCTAG

Peptide Sequence

PEP ID

Os06t0157500-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:2926823:2928474:1 gene:Os06g0157500 transcript:Os06t0157500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE FLOWERING-LOCUS T 1 description:Florigen, Flowering time, Long-day promotion (Os06t0157500-01)
Sequence

MAGSGRDDPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGN
DMRTFYTLVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHR
LVFVLFQQLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGRRVYP

Transcript Sequence

Transcript ID

Os06t0157500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2926823:2928474:1 gene:Os06g0157500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE FLOWERING-LOCUS T 1 description:Florigen, Flowering time, Long-day promotion (Os06t0157500-01)
Sequence

CCTGTCACTGTTTGGCTAGCTTAACCTTCCTGACATCTATCCTCTGGATTGAACGGCAGG
AGATACCTAAGCTAGCTAGCAATCTCTATCGATCTGTTTGTTTACATGTTCAGTTAAAGG
TTACTGAGAAATGCCTAGAGTTTTTCCGGCTAGCTTCATAAGTTAGTGGGTTAGCTGACC
TAGATTCAAAGTCTAATCCTTTTATTTATTTGATATTAGATATCCTAACGTTTTTAGTTA
GAGGTTATTAATTTGACATGGCCGGCAGCGGCAGGGACGATCCTCTTGTGGTTGGCAGGA
TTGTGGGTGATGTGCTGGATCCATTCGTCCGGATCACTAACCTCAGTGTCAGCTATGGTG
CAAGGATCGTCTCCAATGGCTGCGAGCTCAAGCCGTCCATGGTGACCCAACAGCCCAGGG
TCGTGGTCGGTGGCAATGACATGAGGACGTTCTACACACTCGTGATGGTAGACCCGGATG
CTCCGAGCCCAAGCAACCCTAACCTTAGGGAGTATCTACACTGGCTGGTCACCGATATTC
CTGGTACCACTGGAGCAACATTTGGGCAAGAGGTGATGTGCTACGAGAGCCCAAGGCCAA
CCATGGGGATCCACCGGCTGGTGTTCGTGCTGTTCCAGCAGCTGGGGCGTCAGACGGTGT
ACGCACCGGGGTGGCGCCAGAACTTCAGCACCAGGAACTTCGCCGAGCTCTACAACCTCG
GCTCGCCGGTCGCCACCGTCTACTTCAACTGCCAGCGCGAGGCCGGCTCCGGCGGCAGGA
GGGTCTACCCCTAGCTAGCTACGCATGCCACCCGGCCTCCATGCATGCAGCAGCTATAGC
TAAGCTGAGACCTGCCTAGCTGTATA