Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0153600-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:2766134:2770398:-1 gene:Os06g0153600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0153600-01);Conserved hypothetical protein. (Os06t0153600-02)
Sequence

ATGCGGCGGCGCCACCGCGAGCAGCTGCCTCCCGGGGCCGACCGCGAACGCCTCCTCGCC
GAGGAGGTCCTCTACCTCCACTCCCTCTGGCGCCGCGCCGCCCCCGCTCCCATCCCTCCT
CGTGGCTCCGGTTCCGTCGCCACCCTCCGCCGCGTCGACCGCCGGAGGCGCAGGAGGCTC
GAGCGCCGCGCCCAGGAGCAGCAGCGGGAGGAATCCGGCCCGGAGTGGCCCCTCGCGCCG
TCTCCGCCCGCCTCCCCGACAACCTGGCACGACAACAAGGCCGCCTCCTCCCCCGCGCAG
CGCCCGCCGCAGCAGAAGCAGCCTTCGCCTGGATCGCTCTCGCAGCGAGCCGCGCTCCGC
GCCGCCGAGGAGTTCTTCTCCAACCGCGGGTCGGACGACGACGACGAGGTGGTGGAGGAG
GAAGGGTCTGAATCGGAGGGCGAGGAGGCGGCGGGGTTCTTCATGGGGCTGTTCGAGCGG
GACGCGGCGCTGCGGGGGCACTACGAGCGGGGGTGGGAGGGAGGGGAGTTCGTGTGCATG
GCGTGCGTGGGGAGGAAGGGGAAGGCCAGGAGGTTCGCCGGCTGCGTCGGCCTCGTCCAG
CACGCCCGCGCCGCCACCCGCTGCGGGAGGCCCCGGGCGCACCGCGCCTTCGCCGCCGCC
ATCTGCCGCGTGCTCGGCTGGGACATCGACAGGATGCCCAGCGTCGTCATCGACCCCCGC
GGCACGCTCGGCCAGGCACTCGCCGCCGCCGAGGCCGCTGCCGCCGTCGCTGCCCAAGAG
AACAATGTTGATGCTGTTGAGAAGACGATCTCTTCTGAAGATCAGGTTGCAGAGAAGGAA
GATGTTGAGACTGGAAAAAATGACGGATCTTTGAGTGATGTGGATGCGATGAAGGAAAAT
TCCAATGTGGGGAAGAACAGCTCTTCAATTAATGACAATAATGGAGATGTTCATGAGAAA
GGGAATGGTGGAGCTTATGAAAAGGACATAATCTGCTGCATACACGTGAACTGA

Peptide Sequence

PEP ID

Os06t0153600-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:2766134:2770398:-1 gene:Os06g0153600 transcript:Os06t0153600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0153600-01);Conserved hypothetical protein. (Os06t0153600-02)
Sequence

MRRRHREQLPPGADRERLLAEEVLYLHSLWRRAAPAPIPPRGSGSVATLRRVDRRRRRRL
ERRAQEQQREESGPEWPLAPSPPASPTTWHDNKAASSPAQRPPQQKQPSPGSLSQRAALR
AAEEFFSNRGSDDDDEVVEEEGSESEGEEAAGFFMGLFERDAALRGHYERGWEGGEFVCM
ACVGRKGKARRFAGCVGLVQHARAATRCGRPRAHRAFAAAICRVLGWDIDRMPSVVIDPR
GTLGQALAAAEAAAAVAAQENNVDAVEKTISSEDQVAEKEDVETGKNDGSLSDVDAMKEN
SNVGKNSSSINDNNGDVHEKGNGGAYEKDIICCIHVN

Transcript Sequence

Transcript ID

Os06t0153600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2766134:2770398:-1 gene:Os06g0153600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0153600-01);Conserved hypothetical protein. (Os06t0153600-02)
Sequence

GATGCGGCGGCGCCACCGCGAGCAGCTGCCTCCCGGGGCCGACCGCGAACGCCTCCTCGC
CGAGGAGGTCCTCTACCTCCACTCCCTCTGGCGCCGCGCCGCCCCCGCTCCCATCCCTCC
TCGTGGCTCCGGTTCCGTCGCCACCCTCCGCCGCGTCGACCGCCGGAGGCGCAGGAGGCT
CGAGCGCCGCGCCCAGGAGCAGCAGCGGGAGGAATCCGGCCCGGAGTGGCCCCTCGCGCC
GTCTCCGCCCGCCTCCCCGACAACCTGGCACGACAACAAGGCCGCCTCCTCCCCCGCGCA
GCGCCCGCCGCAGCAGAAGCAGCCTTCGCCTGGATCGCTCTCGCAGCGAGCCGCGCTCCG
CGCCGCCGAGGAGTTCTTCTCCAACCGCGGGTCGGACGACGACGACGAGGTGGTGGAGGA
GGAAGGGTCTGAATCGGAGGGCGAGGAGGCGGCGGGGTTCTTCATGGGGCTGTTCGAGCG
GGACGCGGCGCTGCGGGGGCACTACGAGCGGGGGTGGGAGGGAGGGGAGTTCGTGTGCAT
GGCGTGCGTGGGGAGGAAGGGGAAGGCCAGGAGGTTCGCCGGCTGCGTCGGCCTCGTCCA
GCACGCCCGCGCCGCCACCCGCTGCGGGAGGCCCCGGGCGCACCGCGCCTTCGCCGCCGC
CATCTGCCGCGTGCTCGGCTGGGACATCGACAGGATGCCCAGCGTCGTCATCGACCCCCG
CGGCACGCTCGGCCAGGCACTCGCCGCCGCCGAGGCCGCTGCCGCCGTCGCTGCCCAAGA
GAACAATGTTGATGCTGTTGAGAAGACGATCTCTTCTGAAGATCAGGTTGCAGAGAAGGA
AGATGTTGAGACTGGAAAAAATGACGGATCTTTGAGTGATGTGGATGCGATGAAGGAAAA
TTCCAATGTGGGGAAGAACAGCTCTTCAATTAATGACAATAATGGAGATGTTCATGAGAA
AGGGAATGGTGGAGCTTATGAAAAGGACATAATCTGCTGCATACACGTGAACTGAAGAAA
AAGGCTTCTGTACTATCCAAGCAGGCATGCTCATCACAGTCTGTCCATGTGATGAGAAGG
AACTGATTAGCGACTATCTGATCGGACAAGCCGAAGAGTCTTTGATCTTGTAGTACATTG
GAAGGAGGCAATATCATAGTCACTAGTCAGCTATAGACAATGTTAGTTTTTAAGGGGAAA
ATGATGTATATCCTATCAATATGCTTATTAACAATCATGCATGGGATGTTAGTCCAGTTT
ACTCCCCTTGAAACATTTCATTGGATCACTTGGTTAATAGTATTTCTTTTTCTTT