Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0152800-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:2724137:2726538:-1 gene:Os06g0152800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0152800-01)
Sequence

ATGGCCGCCGCCGCCGATGACCTCGCGCGCCGCCTCGCCGCGTTCATACCGCTCCCGCAG
CCGCCGCAGAAGGAGCAGCTCTCCGGCGTGGCCGCGGCGGTGCTCGACGCCGGCGGCCGC
CTCGGACGCGCTGTGGGCGACGTGTTCCGACGCCTGCGCATCGACGAAGGCCTCGACGTC
GCCTTGGCGCAGCGGCACCGCAGGAACGGGGGTTCCAGGATCGCCGCCGCCGCCGCCGCC
GTTGATGCGCGGGTCAGCAAGGACAGCGGCGGCGGCGGCGTCGCCGGGCACGATCCGGTC
GGCGTCTCCGGCCGGTTCGCGCGGTCGCAGGGGAGCATGAACCTGTCGGCGACGTACGAC
AGCCGGACGAGCGACGTGGAGAGCTCGGTGGTGGCGAGGGGGGACCTGTGGCGCGCCGAG
GCGTCGCACAGCAGCGCCGCCGCGGCCGCGCCGCCGCTGTTCATGGTGCAGCTCGGCCCG
GTGCTGTTCGTGCGCGACACCACGCTGCTGTTCCCGGTGCACCTGTCCAAGCGCCATCTC
ATCTGGTACGGCTTCGAGCGCAAGAATGGTGTGCATTCAGTCTGTCCTGCTTACTGGTCA
GCTCACAGAAGATGGTTCTTCATGTCAATGATTTGCCTAAATCCTTTTACTTGTTCATTC
ATGGACATGCAATTTCCAAATGGACAACTAAGATATGTAGCCGGCGATGGGTTCACTACT
CGCGCATTTCTTCCTCTATGTCGCGGGATCTTTCAAGCCCATGCGAAATTCCCAGGAGAG
AAGAAGTTTAGTTACTCATTCAAGAACAGGAGTGGAGGAAGCATCACTCCAATGGTGCAG
TGGCCAGATAAGTCTTTCTCACTGGGGACTATCCAAACACTGTCATGGAAGAGATGTGGC
CTTATGTTGCAACCAGCCCTGCAATTCAGCATATGCCCTACTTTCGGTGGAAGCCGTCCG
GGTTTGTCCATGGAGTTGATCCATTCGGTGAATGAGAATGCTGGTGTTGTTTGTGGCTAC
TCTCACACTGCTTCTCCTTCTGCCTATGCGTCTATATCGATTGGGAGATCAAAGTTGAAC
GGGAGTGCAGCAAGTTCAGGGTTAGTGTTGAGAGTTGACGCTCCCCTCCATAGCTTTGGC
CGGCCCTGGTTCTCTATTCAGATGAACAGCGGTCTGGAGTTCTGA

Peptide Sequence

PEP ID

Os06t0152800-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:2724137:2726538:-1 gene:Os06g0152800 transcript:Os06t0152800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0152800-01)
Sequence

MAAAADDLARRLAAFIPLPQPPQKEQLSGVAAAVLDAGGRLGRAVGDVFRRLRIDEGLDV
ALAQRHRRNGGSRIAAAAAAVDARVSKDSGGGGVAGHDPVGVSGRFARSQGSMNLSATYD
SRTSDVESSVVARGDLWRAEASHSSAAAAAPPLFMVQLGPVLFVRDTTLLFPVHLSKRHL
IWYGFERKNGVHSVCPAYWSAHRRWFFMSMICLNPFTCSFMDMQFPNGQLRYVAGDGFTT
RAFLPLCRGIFQAHAKFPGEKKFSYSFKNRSGGSITPMVQWPDKSFSLGTIQTLSWKRCG
LMLQPALQFSICPTFGGSRPGLSMELIHSVNENAGVVCGYSHTASPSAYASISIGRSKLN
GSAASSGLVLRVDAPLHSFGRPWFSIQMNSGLEF

Transcript Sequence

Transcript ID

Os06t0152800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2724137:2726538:-1 gene:Os06g0152800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0152800-01)
Sequence

GGGCGGCGGCCAACTTCCCACCCCCCAAACCTCACCGCCGCTCGATCCCATCCACCGCCC
ATGGCCGCCGCCGCCGATGACCTCGCGCGCCGCCTCGCCGCGTTCATACCGCTCCCGCAG
CCGCCGCAGAAGGAGCAGCTCTCCGGCGTGGCCGCGGCGGTGCTCGACGCCGGCGGCCGC
CTCGGACGCGCTGTGGGCGACGTGTTCCGACGCCTGCGCATCGACGAAGGCCTCGACGTC
GCCTTGGCGCAGCGGCACCGCAGGAACGGGGGTTCCAGGATCGCCGCCGCCGCCGCCGCC
GTTGATGCGCGGGTCAGCAAGGACAGCGGCGGCGGCGGCGTCGCCGGGCACGATCCGGTC
GGCGTCTCCGGCCGGTTCGCGCGGTCGCAGGGGAGCATGAACCTGTCGGCGACGTACGAC
AGCCGGACGAGCGACGTGGAGAGCTCGGTGGTGGCGAGGGGGGACCTGTGGCGCGCCGAG
GCGTCGCACAGCAGCGCCGCCGCGGCCGCGCCGCCGCTGTTCATGGTGCAGCTCGGCCCG
GTGCTGTTCGTGCGCGACACCACGCTGCTGTTCCCGGTGCACCTGTCCAAGCGCCATCTC
ATCTGGTACGGCTTCGAGCGCAAGAATGGTGTGCATTCAGTCTGTCCTGCTTACTGGTCA
GCTCACAGAAGATGGTTCTTCATGTCAATGATTTGCCTAAATCCTTTTACTTGTTCATTC
ATGGACATGCAATTTCCAAATGGACAACTAAGATATGTAGCCGGCGATGGGTTCACTACT
CGCGCATTTCTTCCTCTATGTCGCGGGATCTTTCAAGCCCATGCGAAATTCCCAGGAGAG
AAGAAGTTTAGTTACTCATTCAAGAACAGGAGTGGAGGAAGCATCACTCCAATGGTGCAG
TGGCCAGATAAGTCTTTCTCACTGGGGACTATCCAAACACTGTCATGGAAGAGATGTGGC
CTTATGTTGCAACCAGCCCTGCAATTCAGCATATGCCCTACTTTCGGTGGAAGCCGTCCG
GGTTTGTCCATGGAGTTGATCCATTCGGTGAATGAGAATGCTGGTGTTGTTTGTGGCTAC
TCTCACACTGCTTCTCCTTCTGCCTATGCGTCTATATCGATTGGGAGATCAAAGTTGAAC
GGGAGTGCAGCAAGTTCAGGGTTAGTGTTGAGAGTTGACGCTCCCCTCCATAGCTTTGGC
CGGCCCTGGTTCTCTATTCAGATGAACAGCGGTCTGGAGTTCTGAACTTCTGGTTGTTCA
GTGTTTTTCTTCAAACTGAACAATGCAGAAAGTATTACATTGAAGAAACACTTGTATAGA
CAGTCAAATGTTGCAGGAACCGATTGCTTCTTTGTTGGTGATCGGTGGAATGCCAGATCT
CCTAGCCAAAATTTACAAAACAAAATTTGTGGACAGTGATGTGTGTATATATGTGTGTCA
GAAAGTATATATATTTTTTAATAATGAAATTCATTTCGACC