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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0152100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:2690219:2693031:1 gene:Os06g0152100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Profilin-2. (Os06t0152100-01)
Sequence

ATGTCGTGGCAGGCGTACGTCGACGACCACCTGATGTGCGAGATTGACGGCAACCACCTC
ACCGCCGCCGCCATCGTCGGCCACGACGGCAGCGTCTGGGCGCAGTCCCCCAACTTCCCG
CAGTACAAGCCTGAGGAGATTACTGGCATCATGAAGGACTTTGATGAACCCGGCAGTCTC
GCACCAACTGGTCTTTTCCTTGGGGGCACAAAATACATGGTGATCCAAGGTGAACCAGGG
GTTGTCATCCGAGGAAAGAAGGGCACTGGAGGCATATGTGTCAAGAAGACTGGCCTGTCG
TTGATTCTTGGAATCTATGATGAGCCGATGACCCCAGGCCAGTGCAACATGATTGTGGAG
AGGCTTGGCGATTATCTGATCGAGCAGGGTTGCTAA

Peptide Sequence

PEP ID

Os06t0152100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:2690219:2693031:1 gene:Os06g0152100 transcript:Os06t0152100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Profilin-2. (Os06t0152100-01)
Sequence

MSWQAYVDDHLMCEIDGNHLTAAAIVGHDGSVWAQSPNFPQYKPEEITGIMKDFDEPGSL
APTGLFLGGTKYMVIQGEPGVVIRGKKGTGGICVKKTGLSLILGIYDEPMTPGQCNMIVE
RLGDYLIEQGC

Transcript Sequence

Transcript ID

Os06t0152100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2690219:2693031:1 gene:Os06g0152100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Profilin-2. (Os06t0152100-01)
Sequence

GTCAAAGACAACGCGTGCGATCCAAGCAGACCGAGTCGACGAAGCAGCGAAGCAAAGCAG
CAGCAGCAGCGAGCGAGCGCGCGCGGCCGCCGCCGGTGAGGCGAAGATGTCGTGGCAGGC
GTACGTCGACGACCACCTGATGTGCGAGATTGACGGCAACCACCTCACCGCCGCCGCCAT
CGTCGGCCACGACGGCAGCGTCTGGGCGCAGTCCCCCAACTTCCCGCAGTACAAGCCTGA
GGAGATTACTGGCATCATGAAGGACTTTGATGAACCCGGCAGTCTCGCACCAACTGGTCT
TTTCCTTGGGGGCACAAAATACATGGTGATCCAAGGTGAACCAGGGGTTGTCATCCGAGG
AAAGAAGGGCACTGGAGGCATATGTGTCAAGAAGACTGGCCTGTCGTTGATTCTTGGAAT
CTATGATGAGCCGATGACCCCAGGCCAGTGCAACATGATTGTGGAGAGGCTTGGCGATTA
TCTGATCGAGCAGGGTTGCTAAGTCCTCAATATGCTATTTTGGTCATTTGGGACTAAGTT
TACTCCCTATTTGGTTCAGTAATGTGAGCTTGCATCTGCTTGCGTATCACATGATATGGA
GTGAATAATTTAGCTCCGGTTTGTTGGTTGGTGAACGTGTTGAAAAATATTTACCTGTGG
TTTATGTTTGGCATCGTGTCGTATCAAACTCAGCTGTCCATTCACTGAGTTCTGTACATT
TACCTGGTCATGGTACCTGTGGGTTCTGCTTTATGAAGATGATTGCATTTTATTG