Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0151200-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:2635908:2641269:-1 gene:Os06g0151200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os06t0151200-01)
Sequence

ATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTACTACGTGTACGCGCCG
CACCCCTACCCAGATCCGCAGCGGCAGGGGGTACTCACGCTCTTCGTCGCCGGCCTCCCT
GACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGCCCCGGCTTCGACCAC
TGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTCGTGTCATTCGTTAAT
CATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTATTTGATCCAGATACT
GGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAACGTCATGGAGATGGT
GGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGAGCTGCTGACCATGAG
AATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAAT
GATGGAGATGGTGGATCTGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAG
AATGAATTACCAGCAGAACGGAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAA
TCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTA
TTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAG
CAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCT
GATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTA
GCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAAGC
TAG

Peptide Sequence

PEP ID

Os06t0151200-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:2635908:2641269:-1 gene:Os06g0151200 transcript:Os06t0151200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os06t0151200-01)
Sequence

MSLSHHLPPPPGDPYYVYAPHPYPDPQRQGVLTLFVAGLPDDVKPREIHNLFSSRPGFDH
CLLEYTGRGNQVVAFVSFVNHQAALSAMSALNGTVFDPDTGDRLHIELAKSSSRKRHGDG
GVYRVVDKRLKRKERAADHENAGDGGNDDDAWGEDDNGGNDGDGGSDEPLDTENDDSDEK
NELPAERSSGQPGLKQHRGQSLSDDQPDKLSSDIPPCSTLFVANLGHSCTEEELKEVLSK
QPGFHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGTVLASSDADGLQIEYARSKMRKS

Transcript Sequence

Transcript ID

Os06t0151200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2635908:2641269:-1 gene:Os06g0151200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os06t0151200-01)
Sequence

GCTTCTCAATTTATCATTGTTTAACTTTTTTCTTCATCCGATTTTCGGTTCGGACGAGAG
CTCTATTGCCGTAGGAGCAGGAGAAGGGAGCAGGGAGAGCGCCGCCGCCGCCGCCGCCGC
CGCACCGGCGCTGTGCCGACGAGATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAG
ACCCCTACTACGTGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTACTCA
CGCTCTTCGTCGCCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCT
CCAGCCGCCCCGGCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGG
TGGCCTTCGTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATG
GGACTGTATTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTT
CACGTAAACGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAA
AAGAAAGAGCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGG
GCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCTGATGAGCCATTGGACACAG
AAAATGATGATTCCGACGAAAAGAATGAATTACCAGCAGAACGGAGTAGTGGTCAACCAG
GGCTTAAGCAGCATAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTG
ATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAG
AGCTAAAGGAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTG
GTGGAATGCCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGG
ATGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACG
CAAGGTCAAAAATGAGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGC
ACTGACCACCGGGGATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAG
CACATGTAATCGCCAGGCTGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTG
GGCAATCAAACACTTTGTCACAGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTC
AGAAACTTCTCTGTCAGAGTCGGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGG
AGACAACCAGGCGGCTAACCGGCTCTATCAACAATCAATTTGATGTATGTGCTCTTCTTT
GTGCATATTGAACAATTAATTTGATGTGCTCTTCTTGCCGCCATCTTTTG