Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0150100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:2584171:2586156:-1 gene:Os06g0150100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0150100-01)
Sequence

ATGGACCCCACGCCTCACCGCGGCGGCTCGCCGTCGCCGAGGTTCACGCTGCAGCCGAGC
CGCCTCCCGCCGGAGGACATGCTCTTCTGCGTCGACGTCGACCTGGAGACGCGCTCCGAG
ATGAGGATCGCCCCGGGCCCCGCCGCCGCCGCCGCCGCGTCGCCGGGCGCCGCGGGGGCT
TCCTCGGGGGCCGCGGCTGCTTCCAGGCAGGCCGCTCGGCCGCCGGTGAAGAGGATGGAC
GCCGTCAAGCAGGCGCTCCTGCTCTTCGTCCACAGCAAGCTCACCATGTGCCCCGATCAC
CGCTTCGCCTTCGCCTCCCTCGGCGACACCGTCTCCTTGGTAAAGAAGGATTTCAGCAGT
GATGCTGGTTCTGCAGTGGAGGCAATCCAATCCCTGGATGCGTCGGAAACGAGATATGCG
ATGGCTGATCTCACTCAGCTCTTCAAGATAGCTTACCAGGAAGGGAAAAGAGCAGAATTG
CAAGGCCGCCTACTCAGAGTGGTACTCATCTACTGCCGTTCCTCAACTAAGCCTCAACAT
CAGTGGCCCATCAAGCAAAAGAATTTCACCTTGGACATAATCTATCTTCATGACAAGCCT
ACTGCTGATAACTGTCCACAGAAGGTATATGATGCTTTGGTTGATGCACTTGAGCATGTC
AGCCAGTATGAGGGATACATTCTAGAGACTGGTCAGGGGCTTGCTCGAATCCTGTTCCGT
CAGACTTGCATTCTTCTGTCGCATCCCTTACAGCGTTGCATCCAAGATGACCTTGATATT
CCCAAGCCACTTGCTAAGAAAAATATGGTTACTGAAGCTGCGCAGAACGAAGATGGCATG
CCAGTCTCCACCCAGTAG

Peptide Sequence

PEP ID

Os06t0150100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:2584171:2586156:-1 gene:Os06g0150100 transcript:Os06t0150100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0150100-01)
Sequence

MDPTPHRGGSPSPRFTLQPSRLPPEDMLFCVDVDLETRSEMRIAPGPAAAAAASPGAAGA
SSGAAAASRQAARPPVKRMDAVKQALLLFVHSKLTMCPDHRFAFASLGDTVSLVKKDFSS
DAGSAVEAIQSLDASETRYAMADLTQLFKIAYQEGKRAELQGRLLRVVLIYCRSSTKPQH
QWPIKQKNFTLDIIYLHDKPTADNCPQKVYDALVDALEHVSQYEGYILETGQGLARILFR
QTCILLSHPLQRCIQDDLDIPKPLAKKNMVTEAAQNEDGMPVSTQ

Transcript Sequence

Transcript ID

Os06t0150100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2584171:2586156:-1 gene:Os06g0150100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0150100-01)
Sequence

ACATTTCCCCAACCGCCGAACCCCTCGCCGCCGCTGCCCCACCGGCGGCGATGGACCCCA
CGCCTCACCGCGGCGGCTCGCCGTCGCCGAGGTTCACGCTGCAGCCGAGCCGCCTCCCGC
CGGAGGACATGCTCTTCTGCGTCGACGTCGACCTGGAGACGCGCTCCGAGATGAGGATCG
CCCCGGGCCCCGCCGCCGCCGCCGCCGCGTCGCCGGGCGCCGCGGGGGCTTCCTCGGGGG
CCGCGGCTGCTTCCAGGCAGGCCGCTCGGCCGCCGGTGAAGAGGATGGACGCCGTCAAGC
AGGCGCTCCTGCTCTTCGTCCACAGCAAGCTCACCATGTGCCCCGATCACCGCTTCGCCT
TCGCCTCCCTCGGCGACACCGTCTCCTTGGTAAAGAAGGATTTCAGCAGTGATGCTGGTT
CTGCAGTGGAGGCAATCCAATCCCTGGATGCGTCGGAAACGAGATATGCGATGGCTGATC
TCACTCAGCTCTTCAAGATAGCTTACCAGGAAGGGAAAAGAGCAGAATTGCAAGGCCGCC
TACTCAGAGTGGTACTCATCTACTGCCGTTCCTCAACTAAGCCTCAACATCAGTGGCCCA
TCAAGCAAAAGAATTTCACCTTGGACATAATCTATCTTCATGACAAGCCTACTGCTGATA
ACTGTCCACAGAAGGTATATGATGCTTTGGTTGATGCACTTGAGCATGTCAGCCAGTATG
AGGGATACATTCTAGAGACTGGTCAGGGGCTTGCTCGAATCCTGTTCCGTCAGACTTGCA
TTCTTCTGTCGCATCCCTTACAGCGTTGCATCCAAGATGACCTTGATATTCCCAAGCCAC
TTGCTAAGAAAAATATGGTTACTGAAGCTGCGCAGAACGAAGATGGCATGCCAGTCTCCA
CCCAGTAGGTAGTTAGGCCTTCTAGTTCAGTGGTTTGCATCATGAAGTCAACTCAAGAGC
TTCATTTCGTTTTATTTGTTTGCATTAAGGTTGTTCTGTGTAATGCAAATGACCAATTGA
ATGTCAATTTGTTGCTGTGTC