Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0149700-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:2574179:2576676:1 gene:Os06g0149700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine synthase (EC 4.2.99.8). (Os06t0149700-00)
Sequence

ATGGAGGAAGGAGGCAGGAGAGGGATCCCTTCTCTGCTAAATTCATCGTCATCAGATGAA
CATATCGCCACTGATATCACTCAGCTTGTAGGATGGACGCCACTGATAGAGCTGAACCGG
ATCGTCCGAAAAGACGGGGTAAATGCCCGGATTGTTGGCAAATTGGAGTCATACCAACCC
CTCTGCTCTGTCAAGGATCGCAGTGCTCTGAGAATGATTGAGGATGCAGAGGAGAAAGGT
CTGATCTCACCAGGCGTTACGACGCTAGTCGAGCCGACAAGTGGTAATCTTGGAATAGGT
GTGGCATACAATGCTCTGCTCAAAGGTTACAGGTTCGTTGCAGTCATGCCTGCTGAGTAT
TCACTTGATAAGCAAATGTTGTTGACGTATCTAGGGGCCGAGGTTATTTTAACTGATCCT
ACACTTGGTTTTCAGGGACAATTAGACAAAGTTGAACAGATCAAGAATGATATGCCTAAC
GTACATCATCTTGATCAGTTTAAAAATGCAGCAAATCCTGAAGCACACTTTGTATGGACA
GGGCCTGAGATTTGGAAGGATACGGCAGGCAAAGTAGATATCTTTGTGGCTGGTTCTGGC
ACAGGAGGAACAATTTCAGGTGTAGGGAAATATTTGAAGATGAAAAACCCAGCAGTTAAA
GTAATTTGTGTTGAGCCTGCGGAAAGCCCTGTAATTTCAGGTGGTAAGCCTTCGCGGCAT
AAAATTCAGGGAATGGGTCCAGGCTTTGTACCAAAAAACCTGGATATCTCAATCGTCGAT
GAGATCATCACAGTAACTGCACAAGATGCAATGGCTAATGCAAAGAGGCTGGCAAGAGAA
GAGGGTTTACTTGTGGGCATATCATCCGGAGCTAATTTGGCAGCTTGTCTGAAGGTGGCA
TCGAGGAAAGAATATGAGGGAAAGATGATTGTAACCATTTTCCCTAGTGGTGGTGAAAGA
TACATGAACTCTGACCTCTTTGCACAAGCAAGGGAGGAGTGCAGCGCCATGACCTTTTGA

Peptide Sequence

PEP ID

Os06t0149700-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:2574179:2576676:1 gene:Os06g0149700 transcript:Os06t0149700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine synthase (EC 4.2.99.8). (Os06t0149700-00)
Sequence

MEEGGRRGIPSLLNSSSSDEHIATDITQLVGWTPLIELNRIVRKDGVNARIVGKLESYQP
LCSVKDRSALRMIEDAEEKGLISPGVTTLVEPTSGNLGIGVAYNALLKGYRFVAVMPAEY
SLDKQMLLTYLGAEVILTDPTLGFQGQLDKVEQIKNDMPNVHHLDQFKNAANPEAHFVWT
GPEIWKDTAGKVDIFVAGSGTGGTISGVGKYLKMKNPAVKVICVEPAESPVISGGKPSRH
KIQGMGPGFVPKNLDISIVDEIITVTAQDAMANAKRLAREEGLLVGISSGANLAACLKVA
SRKEYEGKMIVTIFPSGGERYMNSDLFAQAREECSAMTF

Transcript Sequence

Transcript ID

Os06t0149700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2574179:2576676:1 gene:Os06g0149700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine synthase (EC 4.2.99.8). (Os06t0149700-00)
Sequence

GTGGATCCAGCTGATGGAAATATATATACTGAGATAGTTCTCTGCTCCTTGCTCCGAGCA
AGTGAACAGCATGGAGGAAGGAGGCAGGAGAGGGATCCCTTCTCTGCTAAATTCATCGTC
ATCAGATGAACATATCGCCACTGATATCACTCAGCTTGTAGGATGGACGCCACTGATAGA
GCTGAACCGGATCGTCCGAAAAGACGGGGTAAATGCCCGGATTGTTGGCAAATTGGAGTC
ATACCAACCCCTCTGCTCTGTCAAGGATCGCAGTGCTCTGAGAATGATTGAGGATGCAGA
GGAGAAAGGTCTGATCTCACCAGGCGTTACGACGCTAGTCGAGCCGACAAGTGGTAATCT
TGGAATAGGTGTGGCATACAATGCTCTGCTCAAAGGTTACAGGTTCGTTGCAGTCATGCC
TGCTGAGTATTCACTTGATAAGCAAATGTTGTTGACGTATCTAGGGGCCGAGGTTATTTT
AACTGATCCTACACTTGGTTTTCAGGGACAATTAGACAAAGTTGAACAGATCAAGAATGA
TATGCCTAACGTACATCATCTTGATCAGTTTAAAAATGCAGCAAATCCTGAAGCACACTT
TGTATGGACAGGGCCTGAGATTTGGAAGGATACGGCAGGCAAAGTAGATATCTTTGTGGC
TGGTTCTGGCACAGGAGGAACAATTTCAGGTGTAGGGAAATATTTGAAGATGAAAAACCC
AGCAGTTAAAGTAATTTGTGTTGAGCCTGCGGAAAGCCCTGTAATTTCAGGTGGTAAGCC
TTCGCGGCATAAAATTCAGGGAATGGGTCCAGGCTTTGTACCAAAAAACCTGGATATCTC
AATCGTCGATGAGATCATCACAGTAACTGCACAAGATGCAATGGCTAATGCAAAGAGGCT
GGCAAGAGAAGAGGGTTTACTTGTGGGCATATCATCCGGAGCTAATTTGGCAGCTTGTCT
GAAGGTGGCATCGAGGAAAGAATATGAGGGAAAGATGATTGTAACCATTTTCCCTAGTGG
TGGTGAAAGATACATGAACTCTGACCTCTTTGCACAAGCAAGGGAGGAGTGCAGCGCCAT
GACCTTTTGATCTCATGGCTTTTTCAGTTCTATTCTACTCTGTATGGAAGCCAAGGTGGC
TTGTACACTGATCAGTGAGCAGAGTGTGGGGGAAAATAAAGAAAAGCCGGATGTGTTGTA
CTTGTTTGTTGTATGAAAATATGAAATAAGAGGACAAGCCATTTATTATTTTTTGTAAAG
AAGACT