Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0148900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:2537903:2539468:1 gene:Os06g0148900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 295 description:Cyclin-like F-box domain containing protein. (Os06t0148900-01)
Sequence	ATGCACCTGTCCCCACAACTCGGCGAGACTATGCCCTCGAAGAAACGGAAGGTAGAGCTC CACGCCGACGATCAGCCTCCGCCAACCCAGGCAATAATGGCCACACCAGAGCCCTGCAGT GGACGCCCATGGCCGGACCTCCCGTCGGAGCTCCTGGGCCTCGTGCTCCTCCGCCTGCCG TCCCACGCCGACCGCGTCCGCCTCCGCGCCGTCTGCCGCCCATGGCGCTCCAGCGCGCGG GTGGAGCTGGATCTTCTTCCGCCGCCCCTCCCGTGGCTCCTCCTCCGCGGCGGCGCCTTC ATCACCCTCCCCGACGGCGCGGCCCACCGCTTGCCCGCCGTCCCCGGCGATGCCACGCAC CTCGCTTCCACGGGAAGCGGCCTCCTCATCGTGCACGGCGACGGCATGCTCTCCCTGATG AACCCGTCCTCCTTGGCAACGACCCCTCTCGCCGCCCTCGCCGCCGTGCTCCCTAAATAC ATCAGCTCCATCGTCGACATTGCATCCTTCCAAGGGAAGCTCTACTACCTAACATCTGAC GTAAGGAAACGTCAGGAGGAGCTCTATATCTTTGGAGTCGATAATGCTAAGCAGATTGGC ATAAGATGCATAAGCAGCACCCTGAAAGATATAGGCGAGGAATCATGGTTTGGCCCTTGC TCCACCGAAAGGTACGCGACGGAGCGATATCTCGTCGCGTCCAACGATCGGCTGCTCATG GTGCGACGGTGGATCAATCTTCCACCAATCTATCCAAGCGACAGTGGCATTGTTAAGCGA ACACGGCGGTTCGAAGTCTTTGAAGCCGCAGACCTGAGCAGTGGCTGTGGAAGGTGGATC AAGGTGGATACATTGATGGGGCATGCTCTCTTTGTTAGCAAGGGCTGCTCCAAGTCGCTC AGTGCCGGAGCTGAAGAAGACTGCATCTACTTCATGCATGAGGACATCAAGAATGGGAAG CCTGAAGATCCTTTTTTGGACTCTGGCGTGTACAACATGAGAGACGGGACAGTGGCGCCA TTGTTGACAGAGACTCTAGTGGCGGAGCCTCTTGCAGTACACGGCGGTCCATGGTGTCCA ACTTGGCTTTTCCCCTCTGAAACTTGA

Peptide Sequence

PEP ID	Os06t0148900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:2537903:2539468:1 gene:Os06g0148900 transcript:Os06t0148900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 295 description:Cyclin-like F-box domain containing protein. (Os06t0148900-01)
Sequence	MHLSPQLGETMPSKKRKVELHADDQPPPTQAIMATPEPCSGRPWPDLPSELLGLVLLRLP SHADRVRLRAVCRPWRSSARVELDLLPPPLPWLLLRGGAFITLPDGAAHRLPAVPGDATH LASTGSGLLIVHGDGMLSLMNPSSLATTPLAALAAVLPKYISSIVDIASFQGKLYYLTSD VRKRQEELYIFGVDNAKQIGIRCISSTLKDIGEESWFGPCSTERYATERYLVASNDRLLM VRRWINLPPIYPSDSGIVKRTRRFEVFEAADLSSGCGRWIKVDTLMGHALFVSKGCSKSL SAGAEEDCIYFMHEDIKNGKPEDPFLDSGVYNMRDGTVAPLLTETLVAEPLAVHGGPWCP TWLFPSET

Transcript Sequence

Transcript ID	Os06t0148900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:2537903:2539468:1 gene:Os06g0148900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 295 description:Cyclin-like F-box domain containing protein. (Os06t0148900-01)
Sequence	AAAAAAAAATAATAAAAAGAGGCAGGAGCAGCTATACGATTTCCTCCTACGCGAGAAACC CCAATTCCCCAACCTCGCCGGCGATCGCCGATTATCGCGGCCTCGCCGCCGGCGGCTCCC ACCGGCGATGCACCTGTCCCCACAACTCGGCGAGACTATGCCCTCGAAGAAACGGAAGGT AGAGCTCCACGCCGACGATCAGCCTCCGCCAACCCAGGCAATAATGGCCACACCAGAGCC CTGCAGTGGACGCCCATGGCCGGACCTCCCGTCGGAGCTCCTGGGCCTCGTGCTCCTCCG CCTGCCGTCCCACGCCGACCGCGTCCGCCTCCGCGCCGTCTGCCGCCCATGGCGCTCCAG CGCGCGGGTGGAGCTGGATCTTCTTCCGCCGCCCCTCCCGTGGCTCCTCCTCCGCGGCGG CGCCTTCATCACCCTCCCCGACGGCGCGGCCCACCGCTTGCCCGCCGTCCCCGGCGATGC CACGCACCTCGCTTCCACGGGAAGCGGCCTCCTCATCGTGCACGGCGACGGCATGCTCTC CCTGATGAACCCGTCCTCCTTGGCAACGACCCCTCTCGCCGCCCTCGCCGCCGTGCTCCC TAAATACATCAGCTCCATCGTCGACATTGCATCCTTCCAAGGGAAGCTCTACTACCTAAC ATCTGACGTAAGGAAACGTCAGGAGGAGCTCTATATCTTTGGAGTCGATAATGCTAAGCA GATTGGCATAAGATGCATAAGCAGCACCCTGAAAGATATAGGCGAGGAATCATGGTTTGG CCCTTGCTCCACCGAAAGGTACGCGACGGAGCGATATCTCGTCGCGTCCAACGATCGGCT GCTCATGGTGCGACGGTGGATCAATCTTCCACCAATCTATCCAAGCGACAGTGGCATTGT TAAGCGAACACGGCGGTTCGAAGTCTTTGAAGCCGCAGACCTGAGCAGTGGCTGTGGAAG GTGGATCAAGGTGGATACATTGATGGGGCATGCTCTCTTTGTTAGCAAGGGCTGCTCCAA GTCGCTCAGTGCCGGAGCTGAAGAAGACTGCATCTACTTCATGCATGAGGACATCAAGAA TGGGAAGCCTGAAGATCCTTTTTTGGACTCTGGCGTGTACAACATGAGAGACGGGACAGT GGCGCCATTGTTGACAGAGACTCTAGTGGCGGAGCCTCTTGCAGTACACGGCGGTCCATG GTGTCCAACTTGGCTTTTCCCCTCTGAAACTTGAACTTAGTTGGATAGTATTCTTGCTTC CAGGTGTTATATTTACGATTTCTCTTCTTGGCATCTCCTGATAGTAGAGTTTTGGCATGA ACATAAGAGAAGTGTCAATTAACTTTTACTGATGGTTCAGATGTAAATGTAATCAGGTTG CTTTTGGTAAGATGAAGGAAACACATTCAGATC