Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0145800-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:2405409:2408049:1 gene:Os06g0145800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Whirly family nucleic acid binding protein. (Os06t0145800-00)
Sequence

ATGCCGCCACCGTCGCCGCCGCTCTTCCTCTCGCTCCCCTCGCCGCCGCCGCCGCCGCTG
CCGCACCTCCTGCCTAGCCACAGGCCGGCGGCTGCACTGACGCTAGCCCCGGCGCTGTCC
AGCAGGAGGGTTTCTTCCGTCTGCCCCGTGGCCTCCCAGCGCCACTCCGACTACTTCGAC
CCCCGTGCCCCGCCGCCTCCGCCGCCGCGCGACGGGTACGGGGGCCCGGCGTACTCGCCT
CCTGCGGCGCAAGGTGGGCAGCAGAATGGGAGGGTGTTCTCTACGTACAGCATCTACAAG
GGCAAGGCGGCGATGTCGCTCGACCCCAGGCCGCCGCAGTTCGTGCCGCTCGATTCTGGG
GCTTACAAGGTTGTGAAGGAGGGATTCGTGCTGCTACAGTTCGCGCCCGCTGTGGCGACT
CGTCAGTATGATTGGACTCGCAAGCAGGTGTTCTCATTATCTGTGTGGGAGATGGGTAGC
TTGCTTACTCTAGGTCCAACTGATTCTTGCGAGTTCTTCCATGACCCTTTCAAGGGGAGG
AGTGATGAAGGTAAAGTGCGGAAGGTTCTAAAAGTTGAGCCAACACCAGATGGCAACAGT
CGCTTTTTCAATCTCAGTGTTCAAAACCGTCTCCTGAACATCGATGAGAATATTTACATC
CCTATAACCAAAGGAGAATTTGCTGTGATTGTATCGACTTTCAATTATATCATACCACAT
CTTATGGGCTGGAGCACATTTACAAATTCTATAAAACCTGAAGATTCACGGGCGTACACT
AGGCCACAATCCGGGCCTGAATATGAATGGCGGAGGTGA

Peptide Sequence

PEP ID

Os06t0145800-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:2405409:2408049:1 gene:Os06g0145800 transcript:Os06t0145800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Whirly family nucleic acid binding protein. (Os06t0145800-00)
Sequence

MPPPSPPLFLSLPSPPPPPLPHLLPSHRPAAALTLAPALSSRRVSSVCPVASQRHSDYFD
PRAPPPPPPRDGYGGPAYSPPAAQGGQQNGRVFSTYSIYKGKAAMSLDPRPPQFVPLDSG
AYKVVKEGFVLLQFAPAVATRQYDWTRKQVFSLSVWEMGSLLTLGPTDSCEFFHDPFKGR
SDEGKVRKVLKVEPTPDGNSRFFNLSVQNRLLNIDENIYIPITKGEFAVIVSTFNYIIPH
LMGWSTFTNSIKPEDSRAYTRPQSGPEYEWRR

Transcript Sequence

Transcript ID

Os06t0145800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2405409:2408049:1 gene:Os06g0145800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Whirly family nucleic acid binding protein. (Os06t0145800-00)
Sequence

CTCTGCTCCTCCCCAATCCAAACCCGCTCCCCCACCACACCACAACCTGTTCGACGAAAT
GCCGCCACCGTCGCCGCCGCTCTTCCTCTCGCTCCCCTCGCCGCCGCCGCCGCCGCTGCC
GCACCTCCTGCCTAGCCACAGGCCGGCGGCTGCACTGACGCTAGCCCCGGCGCTGTCCAG
CAGGAGGGTTTCTTCCGTCTGCCCCGTGGCCTCCCAGCGCCACTCCGACTACTTCGACCC
CCGTGCCCCGCCGCCTCCGCCGCCGCGCGACGGGTACGGGGGCCCGGCGTACTCGCCTCC
TGCGGCGCAAGGTGGGCAGCAGAATGGGAGGGTGTTCTCTACGTACAGCATCTACAAGGG
CAAGGCGGCGATGTCGCTCGACCCCAGGCCGCCGCAGTTCGTGCCGCTCGATTCTGGGGC
TTACAAGGTTGTGAAGGAGGGATTCGTGCTGCTACAGTTCGCGCCCGCTGTGGCGACTCG
TCAGTATGATTGGACTCGCAAGCAGGTGTTCTCATTATCTGTGTGGGAGATGGGTAGCTT
GCTTACTCTAGGTCCAACTGATTCTTGCGAGTTCTTCCATGACCCTTTCAAGGGGAGGAG
TGATGAAGGTAAAGTGCGGAAGGTTCTAAAAGTTGAGCCAACACCAGATGGCAACAGTCG
CTTTTTCAATCTCAGTGTTCAAAACCGTCTCCTGAACATCGATGAGAATATTTACATCCC
TATAACCAAAGGAGAATTTGCTGTGATTGTATCGACTTTCAATTATATCATACCACATCT
TATGGGCTGGAGCACATTTACAAATTCTATAAAACCTGAAGATTCACGGGCGTACACTAG
GCCACAATCCGGGCCTGAATATGAATGGCGGAGGTGACCAAAGGGTGTCTGAAGGGAGAT
GGCAACTGTCCAAAGGATAGTTCTTGGTGGCTTTGTTAGAAAGTACTTGGTCCACAATTT
GGACGGGCAATCTCTGATCTAGTTAGTTAGCGAATGAACTTTCATTTCTTGCCTTTGTTA
CATTTCTTCTTAGAGCAGGTGGGTGGAAGCCGTTTTATGT