Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0145200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:2380595:2382936:1 gene:Os06g0145200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os06t0145200-01)
Sequence	ATGACCTCCCAATCAGTGCGAGTTGTCAACGTAACTCACGTCCTCCCCGGCGGCGCATCA GCGGCAGCGCCACCGCACGCCGGCGGCGGCGACGTCGACGTCATCGAGCTCTCCTTCCTC GACACCATGTTCTTCGCCCTCACGCCGCTCAAACGCCTCTTCTTCTACGAGGCAGCAGAG CCGTCGTTCCCGGCCATGGTCAGCTCCCTCCAGTCCTCCCTCGCCGCCACCCTCGCCGTC TTCGCGCCCCTCGCCGGCAAGCTCGCCTACCGCCCCTCCCACGACGACGTCGTCATCGAC TGCTCCGTCGCCGCCGTCTCCCCCGGCGTCGTGTTCATCGAGGCCGAGTACCACGACGAC GACGACGCCGTCGTCGACATGCGCCGCCTCGCCGGCGACGAGGAGCACCACACGGAGGCC TTCAAGCGGCTCGTGCCGGAGATGGACGTGGGGCGGCTTCCCGCCCCTCTGCTGTCCGTG CAGGTCACGAGGCCAGCCGCCGCCGCCGCCGGCGGCAGCGGTGGCGTCGTTGCCGTGGGC GTGTCCATCCACCACGTGGTCGGCGACGGCCAGGCCGTGTGGCAGTTTATGAGGGCGTGG TCCACGGCGTCGCGGGAGGGATCGCCGGCGGCGGCGGCGGCGGCCACAATTCCGGTGGTG TTTGACCGGAAACCGGTGCTCCGCCATCCCAACGATGAAGAGATCGCCCGCGTGTTCCTC CGCGTGTTCGCGCCGGCGCTGCCATTAGTGGATTGCTCATTATTTCCAGAGCCAGACGTG ACGCGTCAATGGAGGAAGACCTACCTGCTCCGGCCTCACCAAATCCAATCGCTGAAGCAG CGGATGCTCGCCAAGACGAAGGAGCAGCTAATGTTAATGGCGGCGCCAACCACCCACGTT GCTGTCCTGTCTCTCTACTGGACGTCGCTCGTTCGCGCCAAGTTCACGAGCACCGGCGGG GGCGGCGCCGGCGACGGTGACGTCTACTTCATGATTCCCGGCGACTTGCGCCGCCGCCTG AGGCCGCCGGTCGGCGACGGCTACTTCGGCAACTGCGTGAAACCATGCTACGCGAGCGCC GCCGTCGGGGACCTCCGCGGCGGCAACGGCCTGGTGCACGCCGCCGCCGCGTTCCAGAGC GCGATCCGCGGGAGCCTGGAGTGCGACGACCCGCTCGCCGACGACGTCGAGCGGTGGAGC GAGCTCGAGAGGAAGGTGCCCAAGGAGAGGATCGCGCAGGCCAGCGCGTCGCACCGGTTC ATGGCGTACGAGACGGACTTCGGGTGGGGCGCGCCGCGCCGCGTCGAGCTCGTGTCCGTG TACCGCATGGACGTGGTAGCGCTCGTGGCGGCGCCGCCGGCCGCCGGCGGCGGTGTGCAG GTCTCCGTCGCGCTCGACCGTGCCCACATGGAGGCGTTCGACAGCTACTTCCTGCAGAAT TCGGACACCAAATCCGACTCGCCATCAATCTAG

Peptide Sequence

PEP ID	Os06t0145200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:2380595:2382936:1 gene:Os06g0145200 transcript:Os06t0145200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os06t0145200-01)
Sequence	MTSQSVRVVNVTHVLPGGASAAAPPHAGGGDVDVIELSFLDTMFFALTPLKRLFFYEAAE PSFPAMVSSLQSSLAATLAVFAPLAGKLAYRPSHDDVVIDCSVAAVSPGVVFIEAEYHDD DDAVVDMRRLAGDEEHHTEAFKRLVPEMDVGRLPAPLLSVQVTRPAAAAAGGSGGVVAVG VSIHHVVGDGQAVWQFMRAWSTASREGSPAAAAAATIPVVFDRKPVLRHPNDEEIARVFL RVFAPALPLVDCSLFPEPDVTRQWRKTYLLRPHQIQSLKQRMLAKTKEQLMLMAAPTTHV AVLSLYWTSLVRAKFTSTGGGGAGDGDVYFMIPGDLRRRLRPPVGDGYFGNCVKPCYASA AVGDLRGGNGLVHAAAAFQSAIRGSLECDDPLADDVERWSELERKVPKERIAQASASHRF MAYETDFGWGAPRRVELVSVYRMDVVALVAAPPAAGGGVQVSVALDRAHMEAFDSYFLQN SDTKSDSPSI

Transcript Sequence

Transcript ID	Os06t0145200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:2380595:2382936:1 gene:Os06g0145200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os06t0145200-01)
Sequence	AATCAATCAGAAGCGGTTGCAGGATGACCTCCCAATCAGTGCGAGTTGTCAACGTAACTC ACGTCCTCCCCGGCGGCGCATCAGCGGCAGCGCCACCGCACGCCGGCGGCGGCGACGTCG ACGTCATCGAGCTCTCCTTCCTCGACACCATGTTCTTCGCCCTCACGCCGCTCAAACGCC TCTTCTTCTACGAGGCAGCAGAGCCGTCGTTCCCGGCCATGGTCAGCTCCCTCCAGTCCT CCCTCGCCGCCACCCTCGCCGTCTTCGCGCCCCTCGCCGGCAAGCTCGCCTACCGCCCCT CCCACGACGACGTCGTCATCGACTGCTCCGTCGCCGCCGTCTCCCCCGGCGTCGTGTTCA TCGAGGCCGAGTACCACGACGACGACGACGCCGTCGTCGACATGCGCCGCCTCGCCGGCG ACGAGGAGCACCACACGGAGGCCTTCAAGCGGCTCGTGCCGGAGATGGACGTGGGGCGGC TTCCCGCCCCTCTGCTGTCCGTGCAGGTCACGAGGCCAGCCGCCGCCGCCGCCGGCGGCA GCGGTGGCGTCGTTGCCGTGGGCGTGTCCATCCACCACGTGGTCGGCGACGGCCAGGCCG TGTGGCAGTTTATGAGGGCGTGGTCCACGGCGTCGCGGGAGGGATCGCCGGCGGCGGCGG CGGCGGCCACAATTCCGGTGGTGTTTGACCGGAAACCGGTGCTCCGCCATCCCAACGATG AAGAGATCGCCCGCGTGTTCCTCCGCGTGTTCGCGCCGGCGCTGCCATTAGTGGATTGCT CATTATTTCCAGAGCCAGACGTGACGCGTCAATGGAGGAAGACCTACCTGCTCCGGCCTC ACCAAATCCAATCGCTGAAGCAGCGGATGCTCGCCAAGACGAAGGAGCAGCTAATGTTAA TGGCGGCGCCAACCACCCACGTTGCTGTCCTGTCTCTCTACTGGACGTCGCTCGTTCGCG CCAAGTTCACGAGCACCGGCGGGGGCGGCGCCGGCGACGGTGACGTCTACTTCATGATTC CCGGCGACTTGCGCCGCCGCCTGAGGCCGCCGGTCGGCGACGGCTACTTCGGCAACTGCG TGAAACCATGCTACGCGAGCGCCGCCGTCGGGGACCTCCGCGGCGGCAACGGCCTGGTGC ACGCCGCCGCCGCGTTCCAGAGCGCGATCCGCGGGAGCCTGGAGTGCGACGACCCGCTCG CCGACGACGTCGAGCGGTGGAGCGAGCTCGAGAGGAAGGTGCCCAAGGAGAGGATCGCGC AGGCCAGCGCGTCGCACCGGTTCATGGCGTACGAGACGGACTTCGGGTGGGGCGCGCCGC GCCGCGTCGAGCTCGTGTCCGTGTACCGCATGGACGTGGTAGCGCTCGTGGCGGCGCCGC CGGCCGCCGGCGGCGGTGTGCAGGTCTCCGTCGCGCTCGACCGTGCCCACATGGAGGCGT TCGACAGCTACTTCCTGCAGAATTCGGACACCAAATCCGACTCGCCATCAATCTAGCTAA GCTACAGTCTTAACAGCATCAGTATATACCAATGTCTTCCTCCTCGTCGTCGTCGTCTTC GCTTGCCATGGATCGGGGAGAAGATAATCACGAGCTACCGCGTCAAGATCACCACAACGA CATGGCGACGTCGAGCGAGTCGGTGAACCAGTTGAAGGACGATGGTACGGAGGAGATGGA CGTCGACGACTACATCGGCGGCGGCAGCGGCGGTGGCGGCGAGGCGTTGATCGGGATGAA GACGGTGGAGGCGCCGGACGACGGCAGCAACTGCCCGATTTGCTTGGACGGCGGCGGCGG CGGTGGGGAGAAGACGACGACGGAGGCGTGGGTGGAGACGCCGTGCGCGCACCGCTTCCA CTCGCGGTGCCTCGAGTCTTGGGCTCGGGTGAAGCTAGGGACCTGCCCCATGTGCCGGCG CGAGCTGACGGCGGCGGCGGCAGCGGCGACGACGACGGCCGGAGAGGATGTGCATGTGCT GGTGGCCGATCCGATGGTGGCGGATCCGCTGCAGGCGAGGTGGAATTTGTTTGTTCAACG GTCAACTGATGGTTTCTAGTTCTACTACTACGTCGACAATGTTGACTATGCTTTTTTTTT TCTCATTGATTTAACTTGTTATCACTATTCGAGTGTACAAACGAATTAATTGTATATGAA GTTGAAGATTTTCTTAAGAAATTGATATGTGTGTGTGTATATATTATAAAAGTCATATTG TTT