Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0143000-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:2256869:2260898:1 gene:Os06g0143000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUPEROXIDE DISMUTASE B description:Iron-superoxide dismutase (EC 1.15.1.1). (Os06t0143000-01)
Sequence

ATGGCGGCTTTCGCCTCCGCTCTCCGCGTTCTCCCCTCGCCGCCGGCTGCGGTGCCTCGT
CGGCTTCGCTCGAGAGAACAAAGGCAGGGCTGTAGATCTCGAAGGTATTCAAAAGTCGTG
GCTTACTACGCTCTCACTACTCCGCCGTATAAACTTGATGCCCTGGAACCTTATATTAGC
AAGAGGACAGTTGAACTTCACTGGGGTAAGCATCAGCAAGACTATGTGGATAGCTTGAAT
AAGCAGCTTGCTACCAGCATGTTCTATGGGTACACTCTGGAGGAACTAATAAAAGAAGCA
TACAACAACGGCAACCCATTACCAGAATATAATAATGCAGCACAGGTATGGAACCATCAC
TTCTTCTGGGAATCAATGCAGCCAGAAGGTGGTGGGTCACCAGGGCGAGGTGTCCTGCAG
CAGATAGAGAAGGATTTTGGCTCTTTTACTAATTTTAGGGAAGAGTTTATACGCTCAGCA
TTATCACTTTTGGGGTCTGGCTGGGTTTGGCTTGTCTTGAAGAGAAAAGAACGAAAATTT
TCGGTAGTCCATACACAAAATGCCATCAGTCCACTTGCACTTGGTGATATTCCACTCATC
AATCTAGACTTGTGGGAGCATGCTTACTACTTGGATTACAAGGATGACAGGCGAATGTAT
GTTACAAACTTTATCGACCATCTTGTCTCTTGGGATACTGTCACTCTACGCATGATGCGC
GCTGAGGCTTTTGTGAACCTTGGTGAACCAAATATCCCAGTTGCATGA

Peptide Sequence

PEP ID

Os06t0143000-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:2256869:2260898:1 gene:Os06g0143000 transcript:Os06t0143000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUPEROXIDE DISMUTASE B description:Iron-superoxide dismutase (EC 1.15.1.1). (Os06t0143000-01)
Sequence

MAAFASALRVLPSPPAAVPRRLRSREQRQGCRSRRYSKVVAYYALTTPPYKLDALEPYIS
KRTVELHWGKHQQDYVDSLNKQLATSMFYGYTLEELIKEAYNNGNPLPEYNNAAQVWNHH
FFWESMQPEGGGSPGRGVLQQIEKDFGSFTNFREEFIRSALSLLGSGWVWLVLKRKERKF
SVVHTQNAISPLALGDIPLINLDLWEHAYYLDYKDDRRMYVTNFIDHLVSWDTVTLRMMR
AEAFVNLGEPNIPVA

Transcript Sequence

Transcript ID

Os06t0143000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2256869:2260898:1 gene:Os06g0143000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUPEROXIDE DISMUTASE B description:Iron-superoxide dismutase (EC 1.15.1.1). (Os06t0143000-01)
Sequence

AGAGGTGGTGGATAGATAGCGCGGCAGAGGAAAGAGGAGAAGAAAAGATGGCGGCTTTCG
CCTCCGCTCTCCGCGTTCTCCCCTCGCCGCCGGCTGCGGTGCCTCGTCGGCTTCGCTCGA
GAGAACAAAGGCAGGGCTGTAGATCTCGAAGGTATTCAAAAGTCGTGGCTTACTACGCTC
TCACTACTCCGCCGTATAAACTTGATGCCCTGGAACCTTATATTAGCAAGAGGACAGTTG
AACTTCACTGGGGTAAGCATCAGCAAGACTATGTGGATAGCTTGAATAAGCAGCTTGCTA
CCAGCATGTTCTATGGGTACACTCTGGAGGAACTAATAAAAGAAGCATACAACAACGGCA
ACCCATTACCAGAATATAATAATGCAGCACAGGTATGGAACCATCACTTCTTCTGGGAAT
CAATGCAGCCAGAAGGTGGTGGGTCACCAGGGCGAGGTGTCCTGCAGCAGATAGAGAAGG
ATTTTGGCTCTTTTACTAATTTTAGGGAAGAGTTTATACGCTCAGCATTATCACTTTTGG
GGTCTGGCTGGGTTTGGCTTGTCTTGAAGAGAAAAGAACGAAAATTTTCGGTAGTCCATA
CACAAAATGCCATCAGTCCACTTGCACTTGGTGATATTCCACTCATCAATCTAGACTTGT
GGGAGCATGCTTACTACTTGGATTACAAGGATGACAGGCGAATGTATGTTACAAACTTTA
TCGACCATCTTGTCTCTTGGGATACTGTCACTCTACGCATGATGCGCGCTGAGGCTTTTG
TGAACCTTGGTGAACCAAATATCCCAGTTGCATGATATGAGATGATATGGATATGACCTA
GAGATATCTATGCATGTATTCTCATCATGAGCGACGCCGAGGAATTTCTAGATCACATGA
TACCTGATGCTGAGATTCGCATGCATGAGAGACACTTACACCACCTCATGTCCTGCACGG
TGAAATAGTGGAAATCTGCTTGAGGATAAACAGCTTTGGTTTTATCGTCACCTTGGAATT
TTGATATAGCATCAAAGCAACCTTGACACTAGAGCATGATTACAGAGTATGGGCCATCGA
TCTAACTTCTTCTTGAAGCTGCACCACTTCTTGCAAACGTTTATGCTTCAGAACTAGGAC
CCATGGTCCCATTATGCTTTTTAGATTAGATCTTCATCCTAAGTTTCGACAACTCATAGC
TGTAGTTTTTGTCTTTCTTTTGGCACAGAATTCTGTCATTGTTAAGCCTAGCTTTGTTCC
CTCTATTATGTAACCTGACCTTTATGTCCCCATTGCTCATTCCTTTTGTCGACATTGAAT
TATTTGATGCGATATTTTCGCATCCATTACTAAGCTTTTGCTC