Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0142700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:2243776:2246692:-1 gene:Os06g0142700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome c oxidase, subunit Vb family protein. (Os06t0142700-01)
Sequence

ATGTGGAAGCGCGCGACCTCCGTCCTCCTCCACCACCGCTCCGCCCTCACCCGCCGCTCC
CCGGCGATCGGCGGCGGCGTCCTTCCCCGTGCTCTCTTCTTCTCCACGCTCGATGCGGCG
CAGGCGAGGACGAGGGTGGAGGACGTGATGCCGATCGCCACCGGGCTCGAGCGCGAGGAG
ATCGCCGCCGAGCTCCAGGGGAAGAAGAGGTTTGATATGGACGCGCCCGTCGGGCCCTTT
GGTACCAAGGAAGCTCCAGCTGTTATTCAGTCATACTACAACAAAAGGATTGTTGGTTGT
CCCGGTGGTGAAGGAGAGGACGAGCATGATGTCGTGTGGTTTTGGTTGGAGAAAGGCAAG
CCACATGAATGCCCTGTCTGCACTCAGTATTTCTCGCTTGAGGTGATAGGAGAAGGAGGA
GATCCTGATGGGCATGACGATGACGACGATCACCACCATCATTAA

Peptide Sequence

PEP ID

Os06t0142700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:2243776:2246692:-1 gene:Os06g0142700 transcript:Os06t0142700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome c oxidase, subunit Vb family protein. (Os06t0142700-01)
Sequence

MWKRATSVLLHHRSALTRRSPAIGGGVLPRALFFSTLDAAQARTRVEDVMPIATGLEREE
IAAELQGKKRFDMDAPVGPFGTKEAPAVIQSYYNKRIVGCPGGEGEDEHDVVWFWLEKGK
PHECPVCTQYFSLEVIGEGGDPDGHDDDDDHHHH

Transcript Sequence

Transcript ID

Os06t0142700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2243776:2246692:-1 gene:Os06g0142700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome c oxidase, subunit Vb family protein. (Os06t0142700-01)
Sequence

CTTTTTCCTCCTCCTAACCACCGCTCCGGCCTCTCCATCTCCCGCCGCTCGCCGTCGCCG
CCGCCGCCCGCCATGTGGAAGCGCGCGACCTCCGTCCTCCTCCACCACCGCTCCGCCCTC
ACCCGCCGCTCCCCGGCGATCGGCGGCGGCGTCCTTCCCCGTGCTCTCTTCTTCTCCACG
CTCGATGCGGCGCAGGCGAGGACGAGGGTGGAGGACGTGATGCCGATCGCCACCGGGCTC
GAGCGCGAGGAGATCGCCGCCGAGCTCCAGGGGAAGAAGAGGTTTGATATGGACGCGCCC
GTCGGGCCCTTTGGTACCAAGGAAGCTCCAGCTGTTATTCAGTCATACTACAACAAAAGG
ATTGTTGGTTGTCCCGGTGGTGAAGGAGAGGACGAGCATGATGTCGTGTGGTTTTGGTTG
GAGAAAGGCAAGCCACATGAATGCCCTGTCTGCACTCAGTATTTCTCGCTTGAGGTGATA
GGAGAAGGAGGAGATCCTGATGGGCATGACGATGACGACGATCACCACCATCATTAAGGT
TGCAGAAGTCACCTCTAGCAATAAAAACACTGGATATGGCCATATCCATGTCAACTCTCA
ATTCAGATGACTTGGAGCAGCAGTGGATTTTGGAAAAACAAAGTTTGTCTTTTTAGAGAT
TTGTTCATGCAAATAACAGGATTCAGTAAACAATGATATGCAATTCTCTTTTTCAGCACA
CCTTAGTCGAATTCAAAATAGGTATGTTTGTTTGTTTGTCTTGATGGATGATTCCATGTT
CAATGGCCACCTGGACCATTTATTTTGGTGTATGATCTGTTATCTGAACATTTCACAAAC
CTTGGTCCTGTTCAATTCAGTTTAAACAAATGAAGTCAGCATTCTG