Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0140100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:2100403:2105394:-1 gene:Os06g0140100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine carboxyl methyltransferase family protein. (Os06t0140100-01)
Sequence

ATGGATGCGGCGGCGGCGGCGGCGGCGGCGGGAGGAGGAGGAGGGGGAGGCGGTAGCGTC
GCGGCGCGGAGCAGCCCGGCGTCCGTGCAGGCCACCAACGACGACGCCGCGGCCAGCAAG
CTGTCATGTGTTAATAAAGGATACATGAAGGATGATTATGTGCACTTCTTTGTCAGACGA
ACAACAAAAAGGGCTCCAATAATAAATCGAGGGTACTATGCACGTTGGTCTGTTCTTAGG
AAGCTTCTGCATCAGTTCCTCGGTGCTGGAAATGGCAGTAATGATCAAAACCGGAAACAA
ATATTATCTCTTGGTGCTGGCTTTGACACGACATTCTTCCAGTTGCAGGACGAAGGCATT
GCTCCATACCTTTATGTTGAGTTGGATTTCAAGGAGGTAACCAGCAAAAAGGCTGCCATC
ATTAACCACTATAGTCAAATGAAGGAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAA
AAAGGTGAAGTGAGAAGTGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGACATACCA
AAACTTGATTCAGTTATTCAGATGGCTGAAATGGACCCTACCTTGCCGACCTTTATAATT
GCAGAGTGTGTGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCA
TCTGATAAGTTCTCCACTGCCATATTTTTCTTATATGAGCAGATCCATCCAGATGATGCA
TTTGGAGAGCAAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCTCCTTGGTATAAAT
GCTACACCAACCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGGATGGCAGAGAGCT
GTTGCATGGGATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGG
ATTGAACGATTGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCAGGAACACTAT
TGTGTGGCTTATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTTTGGGTTTAAGGAC
TAG

Peptide Sequence

PEP ID

Os06t0140100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:2100403:2105394:-1 gene:Os06g0140100 transcript:Os06t0140100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine carboxyl methyltransferase family protein. (Os06t0140100-01)
Sequence

MDAAAAAAAAGGGGGGGGSVAARSSPASVQATNDDAAASKLSCVNKGYMKDDYVHFFVRR
TTKRAPIINRGYYARWSVLRKLLHQFLGAGNGSNDQNRKQILSLGAGFDTTFFQLQDEGI
APYLYVELDFKEVTSKKAAIINHYSQMKEKLGPEASISIEKGEVRSAHYKLFSADIRDIP
KLDSVIQMAEMDPTLPTFIIAECVLIYLDPASTSSIVIWASDKFSTAIFFLYEQIHPDDA
FGEQMIINLESRGCPLLGINATPTLSHKENLFLDHGWQRAVAWDMLKIYNDFIDSEERRR
IERLELFDEFEEWHMMQEHYCVAYGINDAKGLFDDFGFKD

Transcript Sequence

Transcript ID

Os06t0140100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2100403:2105394:-1 gene:Os06g0140100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine carboxyl methyltransferase family protein. (Os06t0140100-01)
Sequence

ATCACGTCTCTCGTCTTCCTCTCCCCTTCACGCCGTGACCCAGCGATCGACCGGCCGGAA
TGGATGCGGCGGCGGCGGCGGCGGCGGCGGGAGGAGGAGGAGGGGGAGGCGGTAGCGTCG
CGGCGCGGAGCAGCCCGGCGTCCGTGCAGGCCACCAACGACGACGCCGCGGCCAGCAAGC
TGTCATGTGTTAATAAAGGATACATGAAGGATGATTATGTGCACTTCTTTGTCAGACGAA
CAACAAAAAGGGCTCCAATAATAAATCGAGGGTACTATGCACGTTGGTCTGTTCTTAGGA
AGCTTCTGCATCAGTTCCTCGGTGCTGGAAATGGCAGTAATGATCAAAACCGGAAACAAA
TATTATCTCTTGGTGCTGGCTTTGACACGACATTCTTCCAGTTGCAGGACGAAGGCATTG
CTCCATACCTTTATGTTGAGTTGGATTTCAAGGAGGTAACCAGCAAAAAGGCTGCCATCA
TTAACCACTATAGTCAAATGAAGGAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAAA
AAGGTGAAGTGAGAAGTGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGACATACCAA
AACTTGATTCAGTTATTCAGATGGCTGAAATGGACCCTACCTTGCCGACCTTTATAATTG
CAGAGTGTGTGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCAT
CTGATAAGTTCTCCACTGCCATATTTTTCTTATATGAGCAGATCCATCCAGATGATGCAT
TTGGAGAGCAAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCTCCTTGGTATAAATG
CTACACCAACCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGGATGGCAGAGAGCTG
TTGCATGGGATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGA
TTGAACGATTGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCAGGAACACTATT
GTGTGGCTTATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTTTGGGTTTAAGGACT
AGCACTCGTCGTGCTCTTTTTGATATCGAACTGAGACAAATTCAACTGGGAATTCCTACT
GTTTCCTATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATATGAGAGAT
GATGGCTATAACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATCGATTGTCA
TGTTGTTATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTCTGACGTTTCC