Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0138100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:2028122:2030211:-1 gene:Os06g0138100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Methionine sulfoxide reductase A5 description:Methionine sulphoxide reductase A domain containing protein. (Os06t0138100-01)
Sequence

ATGGCACGCGGATCCGCCGCCGCGGCGATCGCCGGAGTTGTGTGGGTGCTTCTCCTCCTC
GTGGGGGTGGCGTCGGGGGCGCGTCTTCCGGGCGGGAGCGGGGGTAACCGGGGGCGGGAG
CCGCGCGGGGGAGCGGCGGCGGCGGCGGTGGCCACGGAGACGGCGGTGTTCGCGCTGGGA
AGCTTCTGGAGGTCGGAGGCCGCGTTCGGGTGCCTCCCCGGCGTGATCCGCACCTCCGTC
GGCTACGCCGGCGGGTCCAAGGCCCGCCCTGAGTACCGCAACCTCGGCGACCACGCCGAG
TGCGTCAAGGTTGAATATGATCCCCGGTTGATTCAGTACAAGAAACTTCTAGAGGTCTTC
TGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATGTTGGCAACCAATAC
AGATCCATCATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGTCTTAGCAAAGAA
AAAGAACAAGCTAAGGATCGCCGCAGTGTCATTACCACACAGATCCAACCAATAGGTGCA
TTTTATCCGGCTGAACCGGAACATCAGAAATTTGAGCTGAAGCGCAAGCCGTTTCTCCTG
CAACTGATTGGGAACCTGCCCGAGGAGGAGCTCCTGACCTCAACACTAGCTGCAAAGTTG
AATGCATACGCTGCTGAGCTCTGCTCCCCAAATACCCAGAACAGAATAAACTCCAAGATT
GATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAG

Peptide Sequence

PEP ID

Os06t0138100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:2028122:2030211:-1 gene:Os06g0138100 transcript:Os06t0138100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Methionine sulfoxide reductase A5 description:Methionine sulphoxide reductase A domain containing protein. (Os06t0138100-01)
Sequence

MARGSAAAAIAGVVWVLLLLVGVASGARLPGGSGGNRGREPRGGAAAAAVATETAVFALG
SFWRSEAAFGCLPGVIRTSVGYAGGSKARPEYRNLGDHAECVKVEYDPRLIQYKKLLEVF
WASHDPREVFGQGPDVGNQYRSIIFTNGSVEARLAGLSKEKEQAKDRRSVITTQIQPIGA
FYPAEPEHQKFELKRKPFLLQLIGNLPEEELLTSTLAAKLNAYAAELCSPNTQNRINSKI
DEIAKKGWPILRDI

Transcript Sequence

Transcript ID

Os06t0138100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:2028122:2030211:-1 gene:Os06g0138100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Methionine sulfoxide reductase A5 description:Methionine sulphoxide reductase A domain containing protein. (Os06t0138100-01)
Sequence

CCCCCACCGGCGAGATGGCACGCGGATCCGCCGCCGCGGCGATCGCCGGAGTTGTGTGGG
TGCTTCTCCTCCTCGTGGGGGTGGCGTCGGGGGCGCGTCTTCCGGGCGGGAGCGGGGGTA
ACCGGGGGCGGGAGCCGCGCGGGGGAGCGGCGGCGGCGGCGGTGGCCACGGAGACGGCGG
TGTTCGCGCTGGGAAGCTTCTGGAGGTCGGAGGCCGCGTTCGGGTGCCTCCCCGGCGTGA
TCCGCACCTCCGTCGGCTACGCCGGCGGGTCCAAGGCCCGCCCTGAGTACCGCAACCTCG
GCGACCACGCCGAGTGCGTCAAGGTTGAATATGATCCCCGGTTGATTCAGTACAAGAAAC
TTCTAGAGGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATG
TTGGCAACCAATACAGATCCATCATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTG
GTCTTAGCAAAGAAAAAGAACAAGCTAAGGATCGCCGCAGTGTCATTACCACACAGATCC
AACCAATAGGTGCATTTTATCCGGCTGAACCGGAACATCAGAAATTTGAGCTGAAGCGCA
AGCCGTTTCTCCTGCAACTGATTGGGAACCTGCCCGAGGAGGAGCTCCTGACCTCAACAC
TAGCTGCAAAGTTGAATGCATACGCTGCTGAGCTCTGCTCCCCAAATACCCAGAACAGAA
TAAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGC
TCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCG
CAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGC
GTTCATGTCCTCCTCTGCTCATTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAA
ACTTTCGAGTTGTGTGATGTGACCTGAAATCCTGAATTTATGATTGGTTCTTACAGAACA
GGTGCCGAAATTGTATATTGTTACTCTGGCTCTTTTATGTGTAAAAATATATGATGTGGA
TTCATTACATTCTTAATCAAAAACACTTATTCCC